RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 LINC00313P59037 77 aa7.46□□□□□ -1.22
RNF40-212ENST00000602784 Q75L30 129 aa7.45□□□□□ -1.22
RNF40-212ENST00000602784 A0A1B0GVX0 72 aa7.44□□□□□ -1.22
RNF40-212ENST00000602784 PCOTHQ58A44 107 aa7.44□□□□□ -1.22
RNF40-212ENST00000602784 MUC2Q02817 5179 aa7.43□□□□□ -1.22
RNF40-212ENST00000602784 DSCR10P59022 87 aa7.43□□□□□ -1.22
RNF40-212ENST00000602784 C20orf166-AS1Q96NR2 134 aa7.43□□□□□ -1.22
RNF40-212ENST00000602784 IGHV6-1A0A0B4J1U7 121 aa7.42□□□□□ -1.22
RNF40-212ENST00000602784 C8orf87E5RJ46 101 aa7.42□□□□□ -1.22
RNF40-212ENST00000602784 NDUFB1O75438 58 aa7.42□□□□□ -1.22
RNF40-212ENST00000602784 A8MUU9 505 aa7.41□□□□□ -1.22
RNF40-212ENST00000602784 A8MWP4 228 aa7.41□□□□□ -1.22
RNF40-212ENST00000602784 ETDBQ3ZM63 59 aa7.41□□□□□ -1.22
RNF40-212ENST00000602784 NOTCH2NLQ7Z3S9 236 aa7.4□□□□□ -1.22
RNF40-212ENST00000602784 KRTAP16-1A8MUX0 517 aa7.39□□□□□ -1.23
RNF40-212ENST00000602784 KRTAP4-1Q9BYQ7 146 aa7.39□□□□□ -1.23
RNF40-212ENST00000602784 A0A0U1RQV1 116 aa7.38□□□□□ -1.23
RNF40-212ENST00000602784 ATP11AUNQ6ZP68 121 aa7.38□□□□□ -1.23
RNF40-212ENST00000602784 IGKV3D-7A0A0C4DH55 119 aa7.37□□□□□ -1.23
RNF40-212ENST00000602784 Q6ZVQ6 151 aa7.37□□□□□ -1.23
RNF40-212ENST00000602784 PRR15Q8IV56 129 aa7.36□□□□□ -1.23
RNF40-212ENST00000602784 LINC00846Q9NV44 126 aa7.35□□□□□ -1.23
RNF40-212ENST00000602784 A0A1B0GV90 55 aa7.34□□□□□ -1.23
RNF40-212ENST00000602784 BPY2O14599 106 aa7.34□□□□□ -1.23
RNF40-212ENST00000602784 UBL5Q9BZL1 73 aa7.34□□□□□ -1.23
RNF40-212ENST00000602784 C8orf17Q9NRJ1 99 aa7.33□□□□□ -1.24
RNF40-212ENST00000602784 K7EQZ3 153 aa7.29□□□□□ -1.24
RNF40-212ENST00000602784 Q8N9P0 234 aaPredicted RBP7.29□□□□□ -1.24
RNF40-212ENST00000602784 ACYP1P07311 99 aa7.27□□□□□ -1.25
RNF40-212ENST00000602784 MMP24-AS1A0A0U1RRL7 71 aa7.26□□□□□ -1.25
RNF40-212ENST00000602784 FAM240AA0A1B0GVK7 77 aa7.26□□□□□ -1.25
RNF40-212ENST00000602784 TMEM254Q8TBM7 123 aa7.25□□□□□ -1.25
RNF40-212ENST00000602784 hDV103S1A0JD37 113 aa7.23□□□□□ -1.25
RNF40-212ENST00000602784 CXCL6P80162 114 aa7.23□□□□□ -1.25
RNF40-212ENST00000602784 MRPL34Q9BQ48 92 aaKnown RBP7.23□□□□□ -1.25
RNF40-212ENST00000602784 Q8N9L7 120 aa7.22□□□□□ -1.25
RNF40-212ENST00000602784 FAT4Q6V0I7 4981 aa7.21□□□□□ -1.25
RNF40-212ENST00000602784 ZCCHC13Q8WW36 166 aaKnown RBP7.21□□□□□ -1.26
RNF40-212ENST00000602784 KRTAP19-2Q3LHN2 52 aa7.2□□□□□ -1.26
RNF40-212ENST00000602784 LCE2AQ5TA79 106 aaPredicted RBP7.18□□□□□ -1.26
RNF40-212ENST00000602784 CASC2Q6XLA1 102 aa7.18□□□□□ -1.26
RNF40-212ENST00000602784 LCE2CQ5TA81 110 aa7.17□□□□□ -1.26
RNF40-212ENST00000602784 HCG22E2RYF7 251 aa7.15□□□□□ -1.26
RNF40-212ENST00000602784 WFDC13Q8IUB5 93 aa7.15□□□□□ -1.26
RNF40-212ENST00000602784 ATP5EP2Q5VTU8 51 aa7.14□□□□□ -1.27
RNF40-212ENST00000602784 NDUFS5O43920 106 aa7.13□□□□□ -1.27
RNF40-212ENST00000602784 J3QR89 54 aa7.12□□□□□ -1.27
RNF40-212ENST00000602784 COX6B2Q6YFQ2 88 aa7.1□□□□□ -1.27
RNF40-212ENST00000602784 LINC00643Q86TS7 51 aa7.1□□□□□ -1.27
RNF40-212ENST00000602784 SPINK7P58062 85 aa7.09□□□□□ -1.27
RNF40-212ENST00000602784 HRES1P13985 223 aa7.07□□□□□ -1.28
RNF40-212ENST00000602784 MPLKIPQ8TAP9 179 aa7.07□□□□□ -1.28
RNF40-212ENST00000602784 MT1HP80294 61 aa7.05□□□□□ -1.28
RNF40-212ENST00000602784 Q5W150 140 aa7.05□□□□□ -1.28
RNF40-212ENST00000602784 TP53AIP1Q9HCN2 124 aa7.04□□□□□ -1.28
RNF40-212ENST00000602784 RBM12B-AS1Q9P1G2 102 aa7.04□□□□□ -1.28
RNF40-212ENST00000602784 HIST1H4AP62805 103 aaKnown RBP7.01□□□□□ -1.29
RNF40-212ENST00000602784 FLGP20930 4061 aaPredicted RBP7□□□□□ -1.29
RNF40-212ENST00000602784 FAM236DA0A1B0GTK5 79 aa6.97□□□□□ -1.29
RNF40-212ENST00000602784 FAM236CP0DP71 79 aa6.97□□□□□ -1.29
RNF40-212ENST00000602784 C7orf65Q6ZTY9 151 aa6.97□□□□□ -1.29
RNF40-212ENST00000602784 IGKV2D-30A0A075B6S6 120 aa6.96□□□□□ -1.3
RNF40-212ENST00000602784 K7ERU9 68 aa6.96□□□□□ -1.3
RNF40-212ENST00000602784 IGKV2-30P06310 120 aa6.96□□□□□ -1.3
RNF40-212ENST00000602784 M0R2T5 61 aa6.94□□□□□ -1.3
RNF40-212ENST00000602784 A0A087WVE0 104 aa6.93□□□□□ -1.3
RNF40-212ENST00000602784 UQCRQO14949 82 aa6.89□□□□□ -1.31
RNF40-212ENST00000602784 TRAV22A0A0B4J277 110 aa6.88□□□□□ -1.31
RNF40-212ENST00000602784 KRTAP10-6P60371 365 aaPredicted RBP6.88□□□□□ -1.31
RNF40-212ENST00000602784 LORP23490 312 aaPredicted RBP6.87□□□□□ -1.31
RNF40-212ENST00000602784 IMUPQ9GZP8 106 aa6.87□□□□□ -1.31
RNF40-212ENST00000602784 LCE2BO14633 110 aa6.85□□□□□ -1.31
RNF40-212ENST00000602784 LOC101927531A0A1B0GV80 90 aa6.83□□□□□ -1.32
RNF40-212ENST00000602784 ATOX1O00244 68 aa6.83□□□□□ -1.32
RNF40-212ENST00000602784 H1FX-AS1Q4G0G2 97 aa6.83□□□□□ -1.32
RNF40-212ENST00000602784 CYP4F30PQ9H0H9 118 aa6.83□□□□□ -1.32
RNF40-212ENST00000602784 C4orf26Q17RF5 130 aa6.82□□□□□ -1.32
RNF40-212ENST00000602784 OCR1Q9BZK8 76 aa6.82□□□□□ -1.32
RNF40-212ENST00000602784 H0Y9P7 68 aa6.8□□□□□ -1.32
RNF40-212ENST00000602784 MT-ATP8P03928 68 aa6.8□□□□□ -1.32
RNF40-212ENST00000602784 SCGB1A1P11684 91 aa6.78□□□□□ -1.32
RNF40-212ENST00000602784 C5orf47Q569G3 176 aa6.76□□□□□ -1.33
RNF40-212ENST00000602784 MP68P56378 58 aa6.75□□□□□ -1.33
RNF40-212ENST00000602784 C1orf64Q8NEQ6 169 aa6.75□□□□□ -1.33
RNF40-212ENST00000602784 KRTAP3-1Q9BYR8 98 aa6.74□□□□□ -1.33
RNF40-212ENST00000602784 KRTAP9-8Q9BYQ0 159 aa6.73□□□□□ -1.33
RNF40-212ENST00000602784 LINC00208Q96KT6 92 aa6.72□□□□□ -1.33
RNF40-212ENST00000602784 KRTAP9-2Q9BYQ4 174 aa6.72□□□□□ -1.33
RNF40-212ENST00000602784 H3BPC8 53 aa6.71□□□□□ -1.34
RNF40-212ENST00000602784 SMIM20Q8N5G0 67 aa6.69□□□□□ -1.34
RNF40-212ENST00000602784 FAM236AA0A1B0GUQ0 79 aa6.68□□□□□ -1.34
RNF40-212ENST00000602784 FAM236BA0A1B0GV22 79 aa6.68□□□□□ -1.34
RNF40-212ENST00000602784 TRAV7A0A075B6U4 112 aa6.65□□□□□ -1.34
RNF40-212ENST00000602784 MT2AP02795 61 aa6.65□□□□□ -1.34
RNF40-212ENST00000602784 KLKP1Q107X0 134 aa6.63□□□□□ -1.35
RNF40-212ENST00000602784 S4R3F8 94 aa6.63□□□□□ -1.35
RNF40-212ENST00000602784 A8MUN3 132 aa6.6□□□□□ -1.35
RNF40-212ENST00000602784 MT1FP04733 61 aa6.59□□□□□ -1.35
RNF40-212ENST00000602784 KRTAP10-10P60014 251 aa6.59□□□□□ -1.35
RNF40-212ENST00000602784 LCA10Q71F78 164 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms