RNA–Protein interactions for RNA: ENST00000587470.1

VMP1-205, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-205ENST00000587470 C3orf22Q8N5N4 141 aa2.09□□□□□ -2.07
VMP1-205ENST00000587470 COPS9Q8WXC6 57 aa2.09□□□□□ -2.07
VMP1-205ENST00000587470 SPRR1BP22528 89 aa2.08□□□□□ -2.08
VMP1-205ENST00000587470 FXYD2P54710 66 aa2.08□□□□□ -2.08
VMP1-205ENST00000587470 CTAG1AP78358 180 aa2.08□□□□□ -2.08
VMP1-205ENST00000587470 S100A12P80511 92 aa2.08□□□□□ -2.08
VMP1-205ENST00000587470 A0A0B4J2C4 111 aa2.07□□□□□ -2.08
VMP1-205ENST00000587470 COX7BP24311 80 aa2.07□□□□□ -2.08
VMP1-205ENST00000587470 HINT1P49773 126 aaPredicted RBP2.07□□□□□ -2.08
VMP1-205ENST00000587470 LINC00575Q6W349 94 aa2.07□□□□□ -2.08
VMP1-205ENST00000587470 C12orf57Q99622 126 aa2.07□□□□□ -2.08
VMP1-205ENST00000587470 IGLV5-48A0A075B6I7 105 aa2.06□□□□□ -2.08
VMP1-205ENST00000587470 A8MUU9 505 aa2.06□□□□□ -2.08
VMP1-205ENST00000587470 SMIM6P0DI80 62 aa2.06□□□□□ -2.08
VMP1-205ENST00000587470 HSD52Q0P140 79 aa2.06□□□□□ -2.08
VMP1-205ENST00000587470 SSBP3-AS1Q7Z2R9 100 aa2.06□□□□□ -2.08
VMP1-205ENST00000587470 PRO1933Q9H354 126 aa2.06□□□□□ -2.08
VMP1-205ENST00000587470 UQCR10Q9UDW1 63 aa2.06□□□□□ -2.08
VMP1-205ENST00000587470 BVES-AS1Q5T3Y7 98 aa2.05□□□□□ -2.08
VMP1-205ENST00000587470 LINC00304Q8N9R0 145 aa2.05□□□□□ -2.08
VMP1-205ENST00000587470 PRO1854Q9UHT4 67 aa2.05□□□□□ -2.08
VMP1-205ENST00000587470 TEX49A0A1B0GTD5 131 aa2.04□□□□□ -2.08
VMP1-205ENST00000587470 A8MWP4 228 aa2.04□□□□□ -2.08
VMP1-205ENST00000587470 H7C2G1 150 aa2.04□□□□□ -2.08
VMP1-205ENST00000587470 K7ERJ3 54 aa2.04□□□□□ -2.08
VMP1-205ENST00000587470 K7ERS5 55 aa2.04□□□□□ -2.08
VMP1-205ENST00000587470 SPAG11AQ6PDA7 123 aa2.04□□□□□ -2.08
VMP1-205ENST00000587470 DEFB105AQ8NG35 78 aa2.04□□□□□ -2.08
VMP1-205ENST00000587470 NHP2Q9NX24 153 aaKnown RBP2.04□□□□□ -2.08
VMP1-205ENST00000587470 A0A0G2JQZ4 141 aa2.03□□□□□ -2.08
VMP1-205ENST00000587470 hADV29S1A0JD25 119 aa2.03□□□□□ -2.08
VMP1-205ENST00000587470 H0YGX0 51 aa2.03□□□□□ -2.08
VMP1-205ENST00000587470 SPINK1P00995 79 aa2.03□□□□□ -2.08
VMP1-205ENST00000587470 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.03□□□□□ -2.08
VMP1-205ENST00000587470 Q6ZQY7 126 aa2.03□□□□□ -2.08
VMP1-205ENST00000587470 RAB37Q96AX2 223 aa2.03□□□□□ -2.08
VMP1-205ENST00000587470 A0A1B0GX51 115 aa2.02□□□□□ -2.09
VMP1-205ENST00000587470 SLC25A20O43772 301 aa2.02□□□□□ -2.09
VMP1-205ENST00000587470 RPS29P62273 56 aaKnown RBP2.02□□□□□ -2.09
VMP1-205ENST00000587470 ADM2Q7Z4H4 148 aa2.02□□□□□ -2.09
VMP1-205ENST00000587470 CLEC2BQ92478 149 aa2.02□□□□□ -2.09
VMP1-205ENST00000587470 RETNLBQ9BQ08 111 aa2.02□□□□□ -2.09
VMP1-205ENST00000587470 LAMTOR3Q9UHA4 124 aa2.02□□□□□ -2.09
VMP1-205ENST00000587470 H3BQ85 93 aa2.01□□□□□ -2.09
VMP1-205ENST00000587470 OCIAD2Q56VL3 154 aa2.01□□□□□ -2.09
VMP1-205ENST00000587470 C9orf153Q5TBE3 101 aa2.01□□□□□ -2.09
VMP1-205ENST00000587470 Q5XG85 94 aa2.01□□□□□ -2.09
VMP1-205ENST00000587470 SPINT4Q6UDR6 99 aa2.01□□□□□ -2.09
VMP1-205ENST00000587470 PPDPFLQ8WWR9 84 aa2.01□□□□□ -2.09
VMP1-205ENST00000587470 TSTD3H0UI37 97 aa2□□□□□ -2.09
VMP1-205ENST00000587470 M0R143 59 aa2□□□□□ -2.09
VMP1-205ENST00000587470 FP248Q71RG6 208 aaPredicted RBP2□□□□□ -2.09
VMP1-205ENST00000587470 H3BUT2 72 aa1.99□□□□□ -2.09
VMP1-205ENST00000587470 LST1O00453 97 aa1.99□□□□□ -2.09
VMP1-205ENST00000587470 TRACP01848 142 aa1.99□□□□□ -2.09
VMP1-205ENST00000587470 LINC00313P59037 77 aa1.99□□□□□ -2.09
VMP1-205ENST00000587470 TPRXLQ17RH7 258 aa1.99□□□□□ -2.09
VMP1-205ENST00000587470 C1orf195Q5TG92 126 aa1.99□□□□□ -2.09
VMP1-205ENST00000587470 Q6JHZ5 121 aa1.99□□□□□ -2.09
VMP1-205ENST00000587470 HRCT1Q6UXD1 115 aa1.99□□□□□ -2.09
VMP1-205ENST00000587470 NAA38Q9BRA0 125 aaKnown RBP1.99□□□□□ -2.09
VMP1-205ENST00000587470 SNHG12Q9BXW3 62 aa1.99□□□□□ -2.09
VMP1-205ENST00000587470 TRBV7-7A0A0K0K1E9 115 aa1.98□□□□□ -2.09
VMP1-205ENST00000587470 A0A1W2PNM2 257 aa1.98□□□□□ -2.09
VMP1-205ENST00000587470 TAX1BP3O14907 124 aa1.98□□□□□ -2.09
VMP1-205ENST00000587470 SNCGO76070 127 aa1.98□□□□□ -2.09
VMP1-205ENST00000587470 TCL1BO95988 128 aa1.98□□□□□ -2.09
VMP1-205ENST00000587470 COX6CP09669 75 aa1.98□□□□□ -2.09
VMP1-205ENST00000587470 ASB16-AS1Q495Z4 193 aa1.98□□□□□ -2.09
VMP1-205ENST00000587470 Q6Q795 121 aa1.98□□□□□ -2.09
VMP1-205ENST00000587470 A6NED7 52 aa1.97□□□□□ -2.09
VMP1-205ENST00000587470 F8WEM9 126 aa1.97□□□□□ -2.09
VMP1-205ENST00000587470 H3BMG7 143 aa1.97□□□□□ -2.09
VMP1-205ENST00000587470 TMEM256-PLSCR3K7ERE1 68 aa1.97□□□□□ -2.09
VMP1-205ENST00000587470 IGKV4-1P06312 121 aa1.97□□□□□ -2.09
VMP1-205ENST00000587470 BAALC-AS2P0C853 105 aa1.97□□□□□ -2.09
VMP1-205ENST00000587470 FABP2P12104 132 aa1.97□□□□□ -2.09
VMP1-205ENST00000587470 BATFQ16520 125 aa1.97□□□□□ -2.09
VMP1-205ENST00000587470 LIMD2Q9BT23 127 aa1.97□□□□□ -2.09
VMP1-205ENST00000587470 ORMDL1Q9P0S3 153 aa1.97□□□□□ -2.09
VMP1-205ENST00000587470 TRBV7-4A0A0J9YYF1 115 aa1.96□□□□□ -2.1
VMP1-205ENST00000587470 DNAL4O96015 105 aa1.96□□□□□ -2.1
VMP1-205ENST00000587470 KRTAP12-4P60329 112 aa1.96□□□□□ -2.1
VMP1-205ENST00000587470 TEN1Q86WV5 123 aa1.96□□□□□ -2.1
VMP1-205ENST00000587470 Q96NJ1 140 aa1.96□□□□□ -2.1
VMP1-205ENST00000587470 MUC17Q685J3 4493 aa1.96□□□□□ -2.1
VMP1-205ENST00000587470 TRBV20-1A0A075B6N2 111 aa1.95□□□□□ -2.1
VMP1-205ENST00000587470 A0A1W2PPM0 123 aa1.95□□□□□ -2.1
VMP1-205ENST00000587470 ATXN8Q156A1 80 aa1.95□□□□□ -2.1
VMP1-205ENST00000587470 KRTAP20-1Q3LI63 56 aa1.95□□□□□ -2.1
VMP1-205ENST00000587470 ANKRD29Q8N6D5 301 aa1.95□□□□□ -2.1
VMP1-205ENST00000587470 OBSCN-AS1Q96MR7 158 aa1.95□□□□□ -2.1
VMP1-205ENST00000587470 KRTAP4-1Q9BYQ7 146 aa1.95□□□□□ -2.1
VMP1-205ENST00000587470 A0A087WSZ3 146 aa1.94□□□□□ -2.1
VMP1-205ENST00000587470 C9JAW5 83 aa1.94□□□□□ -2.1
VMP1-205ENST00000587470 RBM3P98179 157 aaKnown RBP1.94□□□□□ -2.1
VMP1-205ENST00000587470 KRTAP6-3Q3LI67 103 aa1.94□□□□□ -2.1
VMP1-205ENST00000587470 COL5A1-AS1Q5SY13 56 aa1.94□□□□□ -2.1
VMP1-205ENST00000587470 C1orf64Q8NEQ6 169 aa1.94□□□□□ -2.1
VMP1-205ENST00000587470 LINC00472Q9H8W2 130 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms