RNA–Protein interactions for RNA: ENST00000579211.1

ITGB4-205, Transcript of integrin subunit beta 4, humanhuman

TSL 2

Gene ITGB4, Length 411 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-205ENST00000579211 A0A1B0GVX0 72 aa9.17□□□□□ -0.94
ITGB4-205ENST00000579211 NDUFB1O75438 58 aa9.17□□□□□ -0.94
ITGB4-205ENST00000579211 C8orf87E5RJ46 101 aa9.16□□□□□ -0.94
ITGB4-205ENST00000579211 H3BT86 120 aa9.16□□□□□ -0.94
ITGB4-205ENST00000579211 NOTCH2NLQ7Z3S9 236 aa9.15□□□□□ -0.94
ITGB4-205ENST00000579211 MTURNQ8N3F0 131 aa9.15□□□□□ -0.94
ITGB4-205ENST00000579211 LCE2CQ5TA81 110 aa9.14□□□□□ -0.95
ITGB4-205ENST00000579211 SPCS1Q9Y6A9 102 aa9.14□□□□□ -0.95
ITGB4-205ENST00000579211 KRTAP16-1A8MUX0 517 aa9.12□□□□□ -0.95
ITGB4-205ENST00000579211 NREPQ16612 68 aa9.12□□□□□ -0.95
ITGB4-205ENST00000579211 KRTAP19-2Q3LHN2 52 aa9.12□□□□□ -0.95
ITGB4-205ENST00000579211 COL5A1-AS1Q5SY13 56 aa9.12□□□□□ -0.95
ITGB4-205ENST00000579211 M0R2T5 61 aa9.07□□□□□ -0.96
ITGB4-205ENST00000579211 MT1HP80294 61 aa9.07□□□□□ -0.96
ITGB4-205ENST00000579211 A8MWP4 228 aa9.06□□□□□ -0.96
ITGB4-205ENST00000579211 PCP4L1A6NKN8 68 aa9.04□□□□□ -0.96
ITGB4-205ENST00000579211 C8orf17Q9NRJ1 99 aa9.01□□□□□ -0.97
ITGB4-205ENST00000579211 IGKV3D-7A0A0C4DH55 119 aa9□□□□□ -0.97
ITGB4-205ENST00000579211 KRTAP9-2Q9BYQ4 174 aa9□□□□□ -0.97
ITGB4-205ENST00000579211 K7EP34 96 aa8.98□□□□□ -0.97
ITGB4-205ENST00000579211 PRR15Q8IV56 129 aa8.97□□□□□ -0.97
ITGB4-205ENST00000579211 FAM236DA0A1B0GTK5 79 aa8.96□□□□□ -0.98
ITGB4-205ENST00000579211 BPY2O14599 106 aa8.96□□□□□ -0.98
ITGB4-205ENST00000579211 FAM236CP0DP71 79 aa8.96□□□□□ -0.98
ITGB4-205ENST00000579211 Q6ZVQ6 151 aa8.96□□□□□ -0.98
ITGB4-205ENST00000579211 ZCCHC13Q8WW36 166 aaKnown RBP8.96□□□□□ -0.98
ITGB4-205ENST00000579211 SMCPP49901 116 aaPredicted RBP8.95□□□□□ -0.98
ITGB4-205ENST00000579211 GTF2H5Q6ZYL4 71 aa8.95□□□□□ -0.98
ITGB4-205ENST00000579211 RBM12B-AS1Q9P1G2 102 aa8.94□□□□□ -0.98
ITGB4-205ENST00000579211 Q8N9P0 234 aaPredicted RBP8.93□□□□□ -0.98
ITGB4-205ENST00000579211 K7EQZ3 153 aa8.9□□□□□ -0.98
ITGB4-205ENST00000579211 PRO0461Q9UI25 63 aa8.9□□□□□ -0.98
ITGB4-205ENST00000579211 NDUFS5O43920 106 aa8.89□□□□□ -0.99
ITGB4-205ENST00000579211 TMEM254Q8TBM7 123 aa8.89□□□□□ -0.99
ITGB4-205ENST00000579211 MRPL34Q9BQ48 92 aaKnown RBP8.89□□□□□ -0.99
ITGB4-205ENST00000579211 FLGP20930 4061 aaPredicted RBP8.89□□□□□ -0.99
ITGB4-205ENST00000579211 MMP24-AS1A0A0U1RRL7 71 aa8.88□□□□□ -0.99
ITGB4-205ENST00000579211 hDV103S1A0JD37 113 aa8.88□□□□□ -0.99
ITGB4-205ENST00000579211 KRTAP10-6P60371 365 aaPredicted RBP8.88□□□□□ -0.99
ITGB4-205ENST00000579211 UBL5Q9BZL1 73 aa8.87□□□□□ -0.99
ITGB4-205ENST00000579211 F8W1H4 67 aa8.85□□□□□ -0.99
ITGB4-205ENST00000579211 SPINK7P58062 85 aa8.85□□□□□ -0.99
ITGB4-205ENST00000579211 HRES1P13985 223 aa8.84□□□□□ -0.99
ITGB4-205ENST00000579211 LORP23490 312 aaPredicted RBP8.84□□□□□ -0.99
ITGB4-205ENST00000579211 LCE2DQ5TA82 110 aaPredicted RBP8.81□□□□□ -1
ITGB4-205ENST00000579211 WFDC13Q8IUB5 93 aa8.81□□□□□ -1
ITGB4-205ENST00000579211 Q8N9L7 120 aa8.81□□□□□ -1
ITGB4-205ENST00000579211 LINC00846Q9NV44 126 aa8.81□□□□□ -1
ITGB4-205ENST00000579211 ETDBQ3ZM63 59 aa8.78□□□□□ -1
ITGB4-205ENST00000579211 CASC2Q6XLA1 102 aa8.78□□□□□ -1
ITGB4-205ENST00000579211 MPLKIPQ8TAP9 179 aa8.78□□□□□ -1
ITGB4-205ENST00000579211 HCG22E2RYF7 251 aa8.72□□□□□ -1.01
ITGB4-205ENST00000579211 IGKV2D-30A0A075B6S6 120 aa8.68□□□□□ -1.02
ITGB4-205ENST00000579211 IGKV2-30P06310 120 aa8.68□□□□□ -1.02
ITGB4-205ENST00000579211 KRTAP9-6A0A140TA67 174 aa8.66□□□□□ -1.02
ITGB4-205ENST00000579211 CXCL6P80162 114 aa8.66□□□□□ -1.02
ITGB4-205ENST00000579211 Q5W150 140 aa8.65□□□□□ -1.02
ITGB4-205ENST00000579211 C7orf65Q6ZTY9 151 aa8.64□□□□□ -1.03
ITGB4-205ENST00000579211 ACYP1P07311 99 aa8.6□□□□□ -1.03
ITGB4-205ENST00000579211 KRTAP9-8Q9BYQ0 159 aa8.58□□□□□ -1.04
ITGB4-205ENST00000579211 CRCT1Q9UGL9 99 aa8.55□□□□□ -1.04
ITGB4-205ENST00000579211 FSIP2Q5CZC0 6907 aa8.55□□□□□ -1.04
ITGB4-205ENST00000579211 H1FX-AS1Q4G0G2 97 aa8.54□□□□□ -1.04
ITGB4-205ENST00000579211 TP53AIP1Q9HCN2 124 aa8.54□□□□□ -1.04
ITGB4-205ENST00000579211 FAM240AA0A1B0GVK7 77 aa8.51□□□□□ -1.05
ITGB4-205ENST00000579211 MT2AP02795 61 aa8.5□□□□□ -1.05
ITGB4-205ENST00000579211 A0A1B0GV90 55 aa8.49□□□□□ -1.05
ITGB4-205ENST00000579211 KRTAP10-10P60014 251 aa8.49□□□□□ -1.05
ITGB4-205ENST00000579211 HIST1H4AP62805 103 aaKnown RBP8.48□□□□□ -1.05
ITGB4-205ENST00000579211 C4orf26Q17RF5 130 aa8.48□□□□□ -1.05
ITGB4-205ENST00000579211 ATP5EP2Q5VTU8 51 aa8.47□□□□□ -1.05
ITGB4-205ENST00000579211 MT1FP04733 61 aa8.42□□□□□ -1.06
ITGB4-205ENST00000579211 LINC00643Q86TS7 51 aa8.38□□□□□ -1.07
ITGB4-205ENST00000579211 C1orf64Q8NEQ6 169 aa8.36□□□□□ -1.07
ITGB4-205ENST00000579211 TRAV22A0A0B4J277 110 aa8.35□□□□□ -1.07
ITGB4-205ENST00000579211 J3QR89 54 aa8.34□□□□□ -1.07
ITGB4-205ENST00000579211 CYP4F30PQ9H0H9 118 aa8.31□□□□□ -1.08
ITGB4-205ENST00000579211 A0A087WVE0 104 aa8.3□□□□□ -1.08
ITGB4-205ENST00000579211 LOC101927531A0A1B0GV80 90 aa8.3□□□□□ -1.08
ITGB4-205ENST00000579211 UQCRQO14949 82 aa8.3□□□□□ -1.08
ITGB4-205ENST00000579211 KRTAP9-3Q9BYQ3 159 aa8.3□□□□□ -1.08
ITGB4-205ENST00000579211 S4R3F8 94 aa8.3□□□□□ -1.08
ITGB4-205ENST00000579211 H0Y9P7 68 aa8.27□□□□□ -1.09
ITGB4-205ENST00000579211 ATOX1O00244 68 aa8.27□□□□□ -1.09
ITGB4-205ENST00000579211 C5orf47Q569G3 176 aa8.27□□□□□ -1.09
ITGB4-205ENST00000579211 KRTAP3-1Q9BYR8 98 aa8.26□□□□□ -1.09
ITGB4-205ENST00000579211 USH2AO75445 5202 aa8.25□□□□□ -1.09
ITGB4-205ENST00000579211 LCE2BO14633 110 aa8.23□□□□□ -1.09
ITGB4-205ENST00000579211 CSAG1Q6PB30 78 aa8.22□□□□□ -1.09
ITGB4-205ENST00000579211 LCA10Q71F78 164 aa8.2□□□□□ -1.1
ITGB4-205ENST00000579211 FAM236AA0A1B0GUQ0 79 aa8.19□□□□□ -1.1
ITGB4-205ENST00000579211 FAM236BA0A1B0GV22 79 aa8.19□□□□□ -1.1
ITGB4-205ENST00000579211 MP68P56378 58 aa8.17□□□□□ -1.1
ITGB4-205ENST00000579211 LINC00208Q96KT6 92 aa8.16□□□□□ -1.1
ITGB4-205ENST00000579211 SCGB1A1P11684 91 aa8.13□□□□□ -1.11
ITGB4-205ENST00000579211 SSPOA2VEC9 5147 aa8.13□□□□□ -1.11
ITGB4-205ENST00000579211 OCR1Q9BZK8 76 aa8.11□□□□□ -1.11
ITGB4-205ENST00000579211 KRTAP19-1Q8IUB9 90 aa8.07□□□□□ -1.12
ITGB4-205ENST00000579211 K7ERU9 68 aa8.05□□□□□ -1.12
ITGB4-205ENST00000579211 KLKP1Q107X0 134 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms