RNA–Protein interactions for RNA: ENST00000578630.1

ERBB2-208, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 874 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-208ENST00000578630 PCOTHQ58A44 107 aa6.21□□□□□ -1.42
ERBB2-208ENST00000578630 IGHV6-1A0A0B4J1U7 121 aa6.2□□□□□ -1.42
ERBB2-208ENST00000578630 DSCR10P59022 87 aa6.2□□□□□ -1.42
ERBB2-208ENST00000578630 ATP11AUNQ6ZP68 121 aa6.2□□□□□ -1.42
ERBB2-208ENST00000578630 Q75L30 129 aa6.2□□□□□ -1.42
ERBB2-208ENST00000578630 A0A1B0GVX0 72 aa6.18□□□□□ -1.42
ERBB2-208ENST00000578630 C8orf87E5RJ46 101 aa6.18□□□□□ -1.42
ERBB2-208ENST00000578630 A8MWP4 228 aa6.16□□□□□ -1.42
ERBB2-208ENST00000578630 C20orf166-AS1Q96NR2 134 aa6.16□□□□□ -1.42
ERBB2-208ENST00000578630 A8MUU9 505 aa6.15□□□□□ -1.42
ERBB2-208ENST00000578630 ETDBQ3ZM63 59 aa6.15□□□□□ -1.42
ERBB2-208ENST00000578630 NOTCH2NLQ7Z3S9 236 aa6.14□□□□□ -1.43
ERBB2-208ENST00000578630 MUC2Q02817 5179 aa6.14□□□□□ -1.43
ERBB2-208ENST00000578630 BPY2O14599 106 aa6.13□□□□□ -1.43
ERBB2-208ENST00000578630 KRTAP4-1Q9BYQ7 146 aa6.12□□□□□ -1.43
ERBB2-208ENST00000578630 UBL5Q9BZL1 73 aa6.12□□□□□ -1.43
ERBB2-208ENST00000578630 IGKV3D-7A0A0C4DH55 119 aa6.11□□□□□ -1.43
ERBB2-208ENST00000578630 KRTAP16-1A8MUX0 517 aa6.11□□□□□ -1.43
ERBB2-208ENST00000578630 Q6ZVQ6 151 aa6.11□□□□□ -1.43
ERBB2-208ENST00000578630 PRR15Q8IV56 129 aa6.11□□□□□ -1.43
ERBB2-208ENST00000578630 C8orf17Q9NRJ1 99 aa6.1□□□□□ -1.43
ERBB2-208ENST00000578630 LINC00846Q9NV44 126 aa6.09□□□□□ -1.43
ERBB2-208ENST00000578630 A0A1B0GV90 55 aa6.06□□□□□ -1.44
ERBB2-208ENST00000578630 K7EQZ3 153 aa6.04□□□□□ -1.44
ERBB2-208ENST00000578630 ACYP1P07311 99 aa6.04□□□□□ -1.44
ERBB2-208ENST00000578630 Q8N9P0 234 aaPredicted RBP6.04□□□□□ -1.44
ERBB2-208ENST00000578630 hDV103S1A0JD37 113 aa6.03□□□□□ -1.44
ERBB2-208ENST00000578630 TMEM254Q8TBM7 123 aa6.02□□□□□ -1.45
ERBB2-208ENST00000578630 MRPL34Q9BQ48 92 aaKnown RBP6.02□□□□□ -1.45
ERBB2-208ENST00000578630 MMP24-AS1A0A0U1RRL7 71 aa6.01□□□□□ -1.45
ERBB2-208ENST00000578630 ZCCHC13Q8WW36 166 aaKnown RBP6□□□□□ -1.45
ERBB2-208ENST00000578630 CXCL6P80162 114 aa5.99□□□□□ -1.45
ERBB2-208ENST00000578630 Q8N9L7 120 aa5.99□□□□□ -1.45
ERBB2-208ENST00000578630 FAM240AA0A1B0GVK7 77 aa5.98□□□□□ -1.45
ERBB2-208ENST00000578630 NDUFS5O43920 106 aa5.98□□□□□ -1.45
ERBB2-208ENST00000578630 COX6B2Q6YFQ2 88 aa5.98□□□□□ -1.45
ERBB2-208ENST00000578630 FAT4Q6V0I7 4981 aa5.97□□□□□ -1.45
ERBB2-208ENST00000578630 CASC2Q6XLA1 102 aa5.97□□□□□ -1.45
ERBB2-208ENST00000578630 WFDC13Q8IUB5 93 aa5.97□□□□□ -1.45
ERBB2-208ENST00000578630 HCG22E2RYF7 251 aa5.94□□□□□ -1.46
ERBB2-208ENST00000578630 LCE2AQ5TA79 106 aaPredicted RBP5.94□□□□□ -1.46
ERBB2-208ENST00000578630 J3QR89 54 aa5.93□□□□□ -1.46
ERBB2-208ENST00000578630 KRTAP19-2Q3LHN2 52 aa5.93□□□□□ -1.46
ERBB2-208ENST00000578630 LCE2CQ5TA81 110 aa5.93□□□□□ -1.46
ERBB2-208ENST00000578630 SPINK7P58062 85 aa5.92□□□□□ -1.46
ERBB2-208ENST00000578630 ATP5EP2Q5VTU8 51 aa5.91□□□□□ -1.46
ERBB2-208ENST00000578630 RBM12B-AS1Q9P1G2 102 aa5.91□□□□□ -1.46
ERBB2-208ENST00000578630 LINC00643Q86TS7 51 aa5.89□□□□□ -1.47
ERBB2-208ENST00000578630 FAM236DA0A1B0GTK5 79 aa5.88□□□□□ -1.47
ERBB2-208ENST00000578630 FAM236CP0DP71 79 aa5.88□□□□□ -1.47
ERBB2-208ENST00000578630 HRES1P13985 223 aa5.86□□□□□ -1.47
ERBB2-208ENST00000578630 HIST1H4AP62805 103 aaKnown RBP5.86□□□□□ -1.47
ERBB2-208ENST00000578630 MT1HP80294 61 aa5.86□□□□□ -1.47
ERBB2-208ENST00000578630 TP53AIP1Q9HCN2 124 aa5.86□□□□□ -1.47
ERBB2-208ENST00000578630 M0R2T5 61 aa5.85□□□□□ -1.47
ERBB2-208ENST00000578630 Q5W150 140 aa5.85□□□□□ -1.47
ERBB2-208ENST00000578630 MPLKIPQ8TAP9 179 aa5.83□□□□□ -1.48
ERBB2-208ENST00000578630 IGKV2D-30A0A075B6S6 120 aa5.81□□□□□ -1.48
ERBB2-208ENST00000578630 IGKV2-30P06310 120 aa5.81□□□□□ -1.48
ERBB2-208ENST00000578630 C7orf65Q6ZTY9 151 aa5.81□□□□□ -1.48
ERBB2-208ENST00000578630 FLGP20930 4061 aaPredicted RBP5.79□□□□□ -1.48
ERBB2-208ENST00000578630 K7ERU9 68 aa5.77□□□□□ -1.49
ERBB2-208ENST00000578630 A0A087WVE0 104 aa5.74□□□□□ -1.49
ERBB2-208ENST00000578630 UQCRQO14949 82 aa5.73□□□□□ -1.49
ERBB2-208ENST00000578630 KRTAP10-6P60371 365 aaPredicted RBP5.73□□□□□ -1.49
ERBB2-208ENST00000578630 TRAV22A0A0B4J277 110 aa5.71□□□□□ -1.5
ERBB2-208ENST00000578630 LORP23490 312 aaPredicted RBP5.7□□□□□ -1.5
ERBB2-208ENST00000578630 H1FX-AS1Q4G0G2 97 aa5.7□□□□□ -1.5
ERBB2-208ENST00000578630 ATOX1O00244 68 aa5.69□□□□□ -1.5
ERBB2-208ENST00000578630 LOC101927531A0A1B0GV80 90 aa5.68□□□□□ -1.5
ERBB2-208ENST00000578630 SCGB1A1P11684 91 aa5.68□□□□□ -1.5
ERBB2-208ENST00000578630 C4orf26Q17RF5 130 aa5.68□□□□□ -1.5
ERBB2-208ENST00000578630 IMUPQ9GZP8 106 aa5.68□□□□□ -1.5
ERBB2-208ENST00000578630 CYP4F30PQ9H0H9 118 aa5.67□□□□□ -1.5
ERBB2-208ENST00000578630 H0Y9P7 68 aa5.66□□□□□ -1.5
ERBB2-208ENST00000578630 MP68P56378 58 aa5.64□□□□□ -1.51
ERBB2-208ENST00000578630 C5orf47Q569G3 176 aa5.63□□□□□ -1.51
ERBB2-208ENST00000578630 C1orf64Q8NEQ6 169 aa5.63□□□□□ -1.51
ERBB2-208ENST00000578630 OCR1Q9BZK8 76 aa5.63□□□□□ -1.51
ERBB2-208ENST00000578630 MT-ATP8P03928 68 aa5.62□□□□□ -1.51
ERBB2-208ENST00000578630 KRTAP9-2Q9BYQ4 174 aa5.62□□□□□ -1.51
ERBB2-208ENST00000578630 LCE2DQ5TA82 110 aaPredicted RBP5.61□□□□□ -1.51
ERBB2-208ENST00000578630 LINC00208Q96KT6 92 aa5.6□□□□□ -1.51
ERBB2-208ENST00000578630 H3BPC8 53 aa5.58□□□□□ -1.52
ERBB2-208ENST00000578630 KRTAP9-8Q9BYQ0 159 aa5.58□□□□□ -1.52
ERBB2-208ENST00000578630 KRTAP3-1Q9BYR8 98 aa5.57□□□□□ -1.52
ERBB2-208ENST00000578630 SMIM20Q8N5G0 67 aa5.56□□□□□ -1.52
ERBB2-208ENST00000578630 S4R3F8 94 aa5.54□□□□□ -1.52
ERBB2-208ENST00000578630 FAM236AA0A1B0GUQ0 79 aa5.53□□□□□ -1.52
ERBB2-208ENST00000578630 FAM236BA0A1B0GV22 79 aa5.53□□□□□ -1.52
ERBB2-208ENST00000578630 KRTAP10-10P60014 251 aa5.52□□□□□ -1.53
ERBB2-208ENST00000578630 TRAV7A0A075B6U4 112 aa5.51□□□□□ -1.53
ERBB2-208ENST00000578630 MT2AP02795 61 aa5.51□□□□□ -1.53
ERBB2-208ENST00000578630 CSAG1Q6PB30 78 aa5.51□□□□□ -1.53
ERBB2-208ENST00000578630 KLKP1Q107X0 134 aa5.5□□□□□ -1.53
ERBB2-208ENST00000578630 A8MUN3 132 aa5.49□□□□□ -1.53
ERBB2-208ENST00000578630 LCA10Q71F78 164 aa5.47□□□□□ -1.53
ERBB2-208ENST00000578630 MT1FP04733 61 aa5.46□□□□□ -1.54
ERBB2-208ENST00000578630 NDUFC1O43677 76 aa5.43□□□□□ -1.54
ERBB2-208ENST00000578630 SERP2Q8N6R1 65 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms