RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 DSCR10P59022 87 aa4.17□□□□□ -1.74
SMG6-211ENST00000572369 KRTAP20-1Q3LI63 56 aa4.17□□□□□ -1.74
SMG6-211ENST00000572369 COL5A1-AS1Q5SY13 56 aa4.17□□□□□ -1.74
SMG6-211ENST00000572369 MTURNQ8N3F0 131 aa4.17□□□□□ -1.74
SMG6-211ENST00000572369 KRTAP4-1Q9BYQ7 146 aa4.17□□□□□ -1.74
SMG6-211ENST00000572369 SPCS1Q9Y6A9 102 aa4.17□□□□□ -1.74
SMG6-211ENST00000572369 IGHV6-1A0A0B4J1U7 121 aa4.16□□□□□ -1.74
SMG6-211ENST00000572369 H3BT86 120 aa4.16□□□□□ -1.74
SMG6-211ENST00000572369 LINC00313P59037 77 aa4.16□□□□□ -1.74
SMG6-211ENST00000572369 Q6ZQT0 140 aa4.16□□□□□ -1.74
SMG6-211ENST00000572369 NEBP20929 6669 aa4.15□□□□□ -1.74
SMG6-211ENST00000572369 LOC110117498A0A087WWA1 95 aa4.15□□□□□ -1.75
SMG6-211ENST00000572369 LINC00472Q9H8W2 130 aa4.15□□□□□ -1.75
SMG6-211ENST00000572369 A0A1B0GW54 56 aa4.14□□□□□ -1.75
SMG6-211ENST00000572369 J3KT08 172 aa4.14□□□□□ -1.75
SMG6-211ENST00000572369 LORP23490 312 aaPredicted RBP4.14□□□□□ -1.75
SMG6-211ENST00000572369 Q75L30 129 aa4.14□□□□□ -1.75
SMG6-211ENST00000572369 NDUFB1O75438 58 aa4.13□□□□□ -1.75
SMG6-211ENST00000572369 NREPQ16612 68 aa4.12□□□□□ -1.75
SMG6-211ENST00000572369 A0A1B0GVX0 72 aa4.11□□□□□ -1.75
SMG6-211ENST00000572369 A8MUU9 505 aa4.11□□□□□ -1.75
SMG6-211ENST00000572369 C8orf87E5RJ46 101 aa4.11□□□□□ -1.75
SMG6-211ENST00000572369 C20orf166-AS1Q96NR2 134 aa4.11□□□□□ -1.75
SMG6-211ENST00000572369 COX6B2Q6YFQ2 88 aa4.1□□□□□ -1.75
SMG6-211ENST00000572369 K7EP34 96 aa4.09□□□□□ -1.75
SMG6-211ENST00000572369 KRTAP10-6P60371 365 aaPredicted RBP4.09□□□□□ -1.75
SMG6-211ENST00000572369 KRTAP6-3Q3LI67 103 aa4.09□□□□□ -1.75
SMG6-211ENST00000572369 GTF2H5Q6ZYL4 71 aa4.09□□□□□ -1.75
SMG6-211ENST00000572369 NOTCH2NLQ7Z3S9 236 aa4.09□□□□□ -1.75
SMG6-211ENST00000572369 KRTAP16-1A8MUX0 517 aa4.07□□□□□ -1.76
SMG6-211ENST00000572369 A8MWP4 228 aa4.07□□□□□ -1.76
SMG6-211ENST00000572369 SMCPP49901 116 aaPredicted RBP4.06□□□□□ -1.76
SMG6-211ENST00000572369 MT1HP80294 61 aa4.06□□□□□ -1.76
SMG6-211ENST00000572369 LCE2CQ5TA81 110 aa4.06□□□□□ -1.76
SMG6-211ENST00000572369 IGKV3D-7A0A0C4DH55 119 aa4.05□□□□□ -1.76
SMG6-211ENST00000572369 BPY2O14599 106 aa4.05□□□□□ -1.76
SMG6-211ENST00000572369 KRTAP19-1Q8IUB9 90 aa4.05□□□□□ -1.76
SMG6-211ENST00000572369 C8orf17Q9NRJ1 99 aa4.05□□□□□ -1.76
SMG6-211ENST00000572369 PRO0461Q9UI25 63 aa4.04□□□□□ -1.76
SMG6-211ENST00000572369 F8W1H4 67 aa4.03□□□□□ -1.76
SMG6-211ENST00000572369 M0R2T5 61 aa4.03□□□□□ -1.76
SMG6-211ENST00000572369 Q6ZVQ6 151 aa4.03□□□□□ -1.76
SMG6-211ENST00000572369 PRR15Q8IV56 129 aa4.03□□□□□ -1.76
SMG6-211ENST00000572369 UBL5Q9BZL1 73 aa4.03□□□□□ -1.76
SMG6-211ENST00000572369 K7EQZ3 153 aa4.02□□□□□ -1.77
SMG6-211ENST00000572369 NDUFS5O43920 106 aa4.02□□□□□ -1.77
SMG6-211ENST00000572369 FAM236DA0A1B0GTK5 79 aa4.01□□□□□ -1.77
SMG6-211ENST00000572369 FAM236CP0DP71 79 aa4.01□□□□□ -1.77
SMG6-211ENST00000572369 KRTAP19-2Q3LHN2 52 aa4.01□□□□□ -1.77
SMG6-211ENST00000572369 ZCCHC13Q8WW36 166 aaKnown RBP4.01□□□□□ -1.77
SMG6-211ENST00000572369 hDV103S1A0JD37 113 aa4□□□□□ -1.77
SMG6-211ENST00000572369 ETDBQ3ZM63 59 aa4□□□□□ -1.77
SMG6-211ENST00000572369 Q8N9P0 234 aaPredicted RBP4□□□□□ -1.77
SMG6-211ENST00000572369 TMEM254Q8TBM7 123 aa4□□□□□ -1.77
SMG6-211ENST00000572369 MRPL34Q9BQ48 92 aaKnown RBP4□□□□□ -1.77
SMG6-211ENST00000572369 RBM12B-AS1Q9P1G2 102 aa4□□□□□ -1.77
SMG6-211ENST00000572369 MMP24-AS1A0A0U1RRL7 71 aa3.99□□□□□ -1.77
SMG6-211ENST00000572369 LINC00846Q9NV44 126 aa3.99□□□□□ -1.77
SMG6-211ENST00000572369 WFDC13Q8IUB5 93 aa3.98□□□□□ -1.77
SMG6-211ENST00000572369 Q8N9L7 120 aa3.98□□□□□ -1.77
SMG6-211ENST00000572369 CASC2Q6XLA1 102 aa3.97□□□□□ -1.77
SMG6-211ENST00000572369 SPINK7P58062 85 aa3.96□□□□□ -1.78
SMG6-211ENST00000572369 MUC12Q9UKN1 5478 aa3.94□□□□□ -1.78
SMG6-211ENST00000572369 HRES1P13985 223 aa3.94□□□□□ -1.78
SMG6-211ENST00000572369 HCG22E2RYF7 251 aa3.93□□□□□ -1.78
SMG6-211ENST00000572369 GPR98Q8WXG9 6306 aa3.93□□□□□ -1.78
SMG6-211ENST00000572369 ACYP1P07311 99 aa3.92□□□□□ -1.78
SMG6-211ENST00000572369 IGKV2D-30A0A075B6S6 120 aa3.91□□□□□ -1.78
SMG6-211ENST00000572369 A0A1B0GV90 55 aa3.91□□□□□ -1.78
SMG6-211ENST00000572369 IGKV2-30P06310 120 aa3.91□□□□□ -1.78
SMG6-211ENST00000572369 CXCL6P80162 114 aa3.91□□□□□ -1.78
SMG6-211ENST00000572369 MPLKIPQ8TAP9 179 aa3.9□□□□□ -1.79
SMG6-211ENST00000572369 Q5W150 140 aa3.88□□□□□ -1.79
SMG6-211ENST00000572369 C7orf65Q6ZTY9 151 aa3.88□□□□□ -1.79
SMG6-211ENST00000572369 FAM240AA0A1B0GVK7 77 aa3.87□□□□□ -1.79
SMG6-211ENST00000572369 HIST1H4AP62805 103 aaKnown RBP3.86□□□□□ -1.79
SMG6-211ENST00000572369 TP53AIP1Q9HCN2 124 aa3.86□□□□□ -1.79
SMG6-211ENST00000572369 FLGP20930 4061 aaPredicted RBP3.85□□□□□ -1.79
SMG6-211ENST00000572369 ATP5EP2Q5VTU8 51 aa3.85□□□□□ -1.79
SMG6-211ENST00000572369 KRTAP2-3P0C7H8 128 aa3.84□□□□□ -1.79
SMG6-211ENST00000572369 KRTAP2-4Q9BYR9 128 aa3.84□□□□□ -1.79
SMG6-211ENST00000572369 KMT2DO14686 5537 aa3.83□□□□□ -1.8
SMG6-211ENST00000572369 J3QR89 54 aa3.83□□□□□ -1.8
SMG6-211ENST00000572369 C4orf26Q17RF5 130 aa3.81□□□□□ -1.8
SMG6-211ENST00000572369 H1FX-AS1Q4G0G2 97 aa3.81□□□□□ -1.8
SMG6-211ENST00000572369 LINC00643Q86TS7 51 aa3.81□□□□□ -1.8
SMG6-211ENST00000572369 LCE2BO14633 110 aa3.79□□□□□ -1.8
SMG6-211ENST00000572369 KRTAP19-6Q3LI70 58 aa3.79□□□□□ -1.8
SMG6-211ENST00000572369 TRAV22A0A0B4J277 110 aa3.78□□□□□ -1.8
SMG6-211ENST00000572369 KRTAP9-8Q9BYQ0 159 aa3.78□□□□□ -1.8
SMG6-211ENST00000572369 A0A087WVE0 104 aa3.77□□□□□ -1.81
SMG6-211ENST00000572369 KRTAP10-10P60014 251 aa3.77□□□□□ -1.81
SMG6-211ENST00000572369 UQCRQO14949 82 aa3.76□□□□□ -1.81
SMG6-211ENST00000572369 C1orf64Q8NEQ6 169 aa3.76□□□□□ -1.81
SMG6-211ENST00000572369 MDN1Q9NU22 5596 aa3.76□□□□□ -1.81
SMG6-211ENST00000572369 LOC101927531A0A1B0GV80 90 aa3.75□□□□□ -1.81
SMG6-211ENST00000572369 H0Y9P7 68 aa3.75□□□□□ -1.81
SMG6-211ENST00000572369 MT2AP02795 61 aa3.75□□□□□ -1.81
SMG6-211ENST00000572369 ATOX1O00244 68 aa3.74□□□□□ -1.81
SMG6-211ENST00000572369 CYP4F30PQ9H0H9 118 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms