RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 SLPIP03973 132 aa4.16□□□□□ -1.74
SMG1-217ENST00000569764 ELOF1P60002 83 aaKnown RBP4.16□□□□□ -1.74
SMG1-217ENST00000569764 SPINK7P58062 85 aa4.15□□□□□ -1.74
SMG1-217ENST00000569764 LINC00304Q8N9R0 145 aa4.15□□□□□ -1.75
SMG1-217ENST00000569764 LINC00308Q8TCZ7 52 aa4.15□□□□□ -1.75
SMG1-217ENST00000569764 SSBP3-AS1Q7Z2R9 100 aa4.14□□□□□ -1.75
SMG1-217ENST00000569764 COX7BP24311 80 aa4.14□□□□□ -1.75
SMG1-217ENST00000569764 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.14□□□□□ -1.75
SMG1-217ENST00000569764 ZNF861PO60384 105 aa4.13□□□□□ -1.75
SMG1-217ENST00000569764 DMBT1Q9UGM3 2413 aaPredicted RBP4.13□□□□□ -1.75
SMG1-217ENST00000569764 PLAC8Q9NZF1 115 aa4.13□□□□□ -1.75
SMG1-217ENST00000569764 IGLV7-43P04211 117 aa4.12□□□□□ -1.75
SMG1-217ENST00000569764 COX6B2Q6YFQ2 88 aa4.12□□□□□ -1.75
SMG1-217ENST00000569764 OBSCN-AS1Q96MR7 158 aa4.12□□□□□ -1.75
SMG1-217ENST00000569764 PKHD1P08F94 4074 aa4.12□□□□□ -1.75
SMG1-217ENST00000569764 C9orf129Q5T035 196 aaKnown RBP4.12□□□□□ -1.75
SMG1-217ENST00000569764 C22orf24Q9Y442 160 aa4.12□□□□□ -1.75
SMG1-217ENST00000569764 UNQ6190/PRO20217Q6UXQ8 127 aa4.11□□□□□ -1.75
SMG1-217ENST00000569764 KRTAP10-1P60331 282 aa4.1□□□□□ -1.75
SMG1-217ENST00000569764 H0Y9P7 68 aa4.1□□□□□ -1.75
SMG1-217ENST00000569764 KRTAP25-1Q3LHN0 102 aa4.1□□□□□ -1.75
SMG1-217ENST00000569764 MYCBP2O75592 4640 aa4.1□□□□□ -1.75
SMG1-217ENST00000569764 TGP01266 2768 aa4.1□□□□□ -1.75
SMG1-217ENST00000569764 DEFB116Q30KQ4 102 aa4.09□□□□□ -1.75
SMG1-217ENST00000569764 KRTAP29-1A8MX34 341 aaPredicted RBP4.09□□□□□ -1.76
SMG1-217ENST00000569764 SPINK1P00995 79 aa4.08□□□□□ -1.76
SMG1-217ENST00000569764 Q8N377 158 aa4.08□□□□□ -1.76
SMG1-217ENST00000569764 Q9BRP9 147 aa4.08□□□□□ -1.76
SMG1-217ENST00000569764 LINC01558Q9Y6Z2 57 aa4.08□□□□□ -1.76
SMG1-217ENST00000569764 FAT3Q8TDW7 4589 aa4.08□□□□□ -1.76
SMG1-217ENST00000569764 A0A096LNI7 61 aa4.08□□□□□ -1.76
SMG1-217ENST00000569764 C15orf56Q8N910 161 aa4.08□□□□□ -1.76
SMG1-217ENST00000569764 SMIM11BQ8TCY0 68 aa4.08□□□□□ -1.76
SMG1-217ENST00000569764 KRTAP10-2P60368 255 aa4.07□□□□□ -1.76
SMG1-217ENST00000569764 DMAC1Q96GE9 116 aa4.07□□□□□ -1.76
SMG1-217ENST00000569764 SPACA4Q8TDM5 124 aa4.06□□□□□ -1.76
SMG1-217ENST00000569764 COA5Q86WW8 74 aa4.06□□□□□ -1.76
SMG1-217ENST00000569764 Q8N9L7 120 aa4.06□□□□□ -1.76
SMG1-217ENST00000569764 SRRM2Q9UQ35 2752 aaKnown RBP4.06□□□□□ -1.76
SMG1-217ENST00000569764 IGKV2-28A0A075B6P5 120 aa4.05□□□□□ -1.76
SMG1-217ENST00000569764 IGKV2D-28P01615 120 aa4.05□□□□□ -1.76
SMG1-217ENST00000569764 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.05□□□□□ -1.76
SMG1-217ENST00000569764 DEFB105AQ8NG35 78 aa4.05□□□□□ -1.76
SMG1-217ENST00000569764 KRTAP26-1Q6PEX3 210 aa4.04□□□□□ -1.76
SMG1-217ENST00000569764 SPANXA2-OT1Q8N9U9 137 aa4.03□□□□□ -1.76
SMG1-217ENST00000569764 PANO1I0J062 215 aa4.03□□□□□ -1.77
SMG1-217ENST00000569764 LOC110117498A0A087WWA1 95 aa4.02□□□□□ -1.77
SMG1-217ENST00000569764 RYR3Q15413 4870 aa4.02□□□□□ -1.77
SMG1-217ENST00000569764 Q6ZRN7 208 aaPredicted RBP4.01□□□□□ -1.77
SMG1-217ENST00000569764 C6orf48Q9UBA6 75 aa4.01□□□□□ -1.77
SMG1-217ENST00000569764 KMT2CQ8NEZ4 4911 aaKnown RBP4.01□□□□□ -1.77
SMG1-217ENST00000569764 A0A1B0GVY2 172 aa4.01□□□□□ -1.77
SMG1-217ENST00000569764 UQCR11O14957 56 aa4□□□□□ -1.77
SMG1-217ENST00000569764 DNAH11Q96DT5 4516 aa4□□□□□ -1.77
SMG1-217ENST00000569764 KRTAP1-5Q9BYS1 174 aa3.99□□□□□ -1.77
SMG1-217ENST00000569764 DNAH8Q96JB1 4490 aa3.99□□□□□ -1.77
SMG1-217ENST00000569764 IGKV4-1P06312 121 aa3.99□□□□□ -1.77
SMG1-217ENST00000569764 PKHD1L1Q86WI1 4243 aa3.99□□□□□ -1.77
SMG1-217ENST00000569764 A0A087WSZ3 146 aa3.99□□□□□ -1.77
SMG1-217ENST00000569764 LCE2DQ5TA82 110 aaPredicted RBP3.98□□□□□ -1.77
SMG1-217ENST00000569764 Q6ZQY7 126 aa3.98□□□□□ -1.77
SMG1-217ENST00000569764 A0A1B0GU69 56 aa3.98□□□□□ -1.77
SMG1-217ENST00000569764 Q6ZSA8 131 aa3.97□□□□□ -1.77
SMG1-217ENST00000569764 ZCCHC13Q8WW36 166 aaKnown RBP3.96□□□□□ -1.77
SMG1-217ENST00000569764 M0R2T5 61 aa3.96□□□□□ -1.78
SMG1-217ENST00000569764 PRLHP81277 87 aa3.96□□□□□ -1.78
SMG1-217ENST00000569764 SACSQ9NZJ4 4579 aa3.95□□□□□ -1.78
SMG1-217ENST00000569764 DNAH17Q9UFH2 4485 aa3.95□□□□□ -1.78
SMG1-217ENST00000569764 ST20-AS1Q8NBB2 130 aa3.95□□□□□ -1.78
SMG1-217ENST00000569764 Q5W150 140 aa3.94□□□□□ -1.78
SMG1-217ENST00000569764 KRTAP7-1Q8IUC3 87 aa3.93□□□□□ -1.78
SMG1-217ENST00000569764 FLG2Q5D862 2391 aaPredicted RBP3.93□□□□□ -1.78
SMG1-217ENST00000569764 LINC00575Q6W349 94 aa3.92□□□□□ -1.78
SMG1-217ENST00000569764 DNAH5Q8TE73 4624 aa3.92□□□□□ -1.78
SMG1-217ENST00000569764 Q6ZRX8 168 aa3.91□□□□□ -1.78
SMG1-217ENST00000569764 SPRR4Q96PI1 79 aa3.91□□□□□ -1.78
SMG1-217ENST00000569764 A0A1W2PNN7 141 aa3.91□□□□□ -1.78
SMG1-217ENST00000569764 FAM168BA1KXE4 195 aa3.91□□□□□ -1.78
SMG1-217ENST00000569764 ACYP2P14621 99 aa3.91□□□□□ -1.78
SMG1-217ENST00000569764 RPS29P62273 56 aaKnown RBP3.91□□□□□ -1.78
SMG1-217ENST00000569764 WFDC13Q8IUB5 93 aa3.91□□□□□ -1.78
SMG1-217ENST00000569764 KCNQ1DNQ9H478 68 aa3.9□□□□□ -1.78
SMG1-217ENST00000569764 CRIPTQ9P021 101 aa3.9□□□□□ -1.79
SMG1-217ENST00000569764 LCE2CQ5TA81 110 aa3.89□□□□□ -1.79
SMG1-217ENST00000569764 IGLV6-57P01721 117 aa3.89□□□□□ -1.79
SMG1-217ENST00000569764 A0A1B0GU33 70 aa3.88□□□□□ -1.79
SMG1-217ENST00000569764 PCOTHQ58A44 107 aa3.88□□□□□ -1.79
SMG1-217ENST00000569764 SPATA8Q6RVD6 105 aa3.88□□□□□ -1.79
SMG1-217ENST00000569764 R4GN34 69 aa3.88□□□□□ -1.79
SMG1-217ENST00000569764 A0A0G2JQZ4 141 aa3.86□□□□□ -1.79
SMG1-217ENST00000569764 KRTAP11-1Q8IUC1 163 aa3.86□□□□□ -1.79
SMG1-217ENST00000569764 LRP1BQ9NZR2 4599 aa3.84□□□□□ -1.79
SMG1-217ENST00000569764 Q96NJ1 140 aa3.83□□□□□ -1.8
SMG1-217ENST00000569764 RYR2Q92736 4967 aa3.83□□□□□ -1.8
SMG1-217ENST00000569764 KRTAP15-1Q3LI76 137 aa3.82□□□□□ -1.8
SMG1-217ENST00000569764 LCE2AQ5TA79 106 aaPredicted RBP3.82□□□□□ -1.8
SMG1-217ENST00000569764 TNXBP22105 4242 aa3.81□□□□□ -1.8
SMG1-217ENST00000569764 LINC00472Q9H8W2 130 aa3.81□□□□□ -1.8
SMG1-217ENST00000569764 K7EQZ3 153 aa3.79□□□□□ -1.8
SMG1-217ENST00000569764 TPRXLQ17RH7 258 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms