RNA–Protein interactions for RNA: ENST00000567271.1

NME3-210, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-210ENST00000567271 A8MUU9 505 aa11.43□□□□□ -0.58
NME3-210ENST00000567271 J3KT08 172 aa11.4□□□□□ -0.58
NME3-210ENST00000567271 NOTCH2NLQ7Z3S9 236 aa11.4□□□□□ -0.58
NME3-210ENST00000567271 IGHV6-1A0A0B4J1U7 121 aa11.39□□□□□ -0.59
NME3-210ENST00000567271 PCP4L1A6NKN8 68 aa11.38□□□□□ -0.59
NME3-210ENST00000567271 KRTAP16-1A8MUX0 517 aa11.38□□□□□ -0.59
NME3-210ENST00000567271 A0A1B0GVX0 72 aa11.37□□□□□ -0.59
NME3-210ENST00000567271 KRTAP19-2Q3LHN2 52 aa11.37□□□□□ -0.59
NME3-210ENST00000567271 LCE2CQ5TA81 110 aa11.35□□□□□ -0.59
NME3-210ENST00000567271 C8orf87E5RJ46 101 aa11.33□□□□□ -0.6
NME3-210ENST00000567271 SMCPP49901 116 aaPredicted RBP11.33□□□□□ -0.6
NME3-210ENST00000567271 K7EP34 96 aa11.32□□□□□ -0.6
NME3-210ENST00000567271 NREPQ16612 68 aa11.3□□□□□ -0.6
NME3-210ENST00000567271 PRO0461Q9UI25 63 aa11.29□□□□□ -0.6
NME3-210ENST00000567271 NDUFB1O75438 58 aa11.28□□□□□ -0.6
NME3-210ENST00000567271 A8MWP4 228 aa11.26□□□□□ -0.61
NME3-210ENST00000567271 IGKV3D-7A0A0C4DH55 119 aa11.23□□□□□ -0.61
NME3-210ENST00000567271 GTF2H5Q6ZYL4 71 aa11.21□□□□□ -0.61
NME3-210ENST00000567271 C8orf17Q9NRJ1 99 aa11.2□□□□□ -0.62
NME3-210ENST00000567271 PRR15Q8IV56 129 aa11.18□□□□□ -0.62
NME3-210ENST00000567271 MT1HP80294 61 aa11.17□□□□□ -0.62
NME3-210ENST00000567271 COX6B2Q6YFQ2 88 aa11.16□□□□□ -0.62
NME3-210ENST00000567271 FLGP20930 4061 aaPredicted RBP11.14□□□□□ -0.63
NME3-210ENST00000567271 Q8N9P0 234 aaPredicted RBP11.14□□□□□ -0.63
NME3-210ENST00000567271 F8W1H4 67 aa11.12□□□□□ -0.63
NME3-210ENST00000567271 Q6ZVQ6 151 aa11.12□□□□□ -0.63
NME3-210ENST00000567271 BPY2O14599 106 aa11.11□□□□□ -0.63
NME3-210ENST00000567271 K7EQZ3 153 aa11.1□□□□□ -0.63
NME3-210ENST00000567271 MMP24-AS1A0A0U1RRL7 71 aa11.08□□□□□ -0.64
NME3-210ENST00000567271 ZCCHC13Q8WW36 166 aaKnown RBP11.08□□□□□ -0.64
NME3-210ENST00000567271 LINC00846Q9NV44 126 aa11.06□□□□□ -0.64
NME3-210ENST00000567271 TMEM254Q8TBM7 123 aa11.04□□□□□ -0.64
NME3-210ENST00000567271 ETDBQ3ZM63 59 aa11.03□□□□□ -0.64
NME3-210ENST00000567271 MRPL34Q9BQ48 92 aaKnown RBP11.02□□□□□ -0.65
NME3-210ENST00000567271 UBL5Q9BZL1 73 aa11.01□□□□□ -0.65
NME3-210ENST00000567271 hDV103S1A0JD37 113 aa11□□□□□ -0.65
NME3-210ENST00000567271 HRES1P13985 223 aa10.99□□□□□ -0.65
NME3-210ENST00000567271 Q8N9L7 120 aa10.98□□□□□ -0.65
NME3-210ENST00000567271 M0R2T5 61 aa10.97□□□□□ -0.65
NME3-210ENST00000567271 MPLKIPQ8TAP9 179 aa10.96□□□□□ -0.65
NME3-210ENST00000567271 SPINK7P58062 85 aa10.94□□□□□ -0.66
NME3-210ENST00000567271 KRTAP9-2Q9BYQ4 174 aa10.94□□□□□ -0.66
NME3-210ENST00000567271 KRTAP10-6P60371 365 aaPredicted RBP10.92□□□□□ -0.66
NME3-210ENST00000567271 RBM12B-AS1Q9P1G2 102 aa10.91□□□□□ -0.66
NME3-210ENST00000567271 NDUFS5O43920 106 aa10.9□□□□□ -0.66
NME3-210ENST00000567271 LORP23490 312 aaPredicted RBP10.9□□□□□ -0.66
NME3-210ENST00000567271 WFDC13Q8IUB5 93 aa10.9□□□□□ -0.66
NME3-210ENST00000567271 CASC2Q6XLA1 102 aa10.89□□□□□ -0.67
NME3-210ENST00000567271 FAM236DA0A1B0GTK5 79 aa10.88□□□□□ -0.67
NME3-210ENST00000567271 FAM236CP0DP71 79 aa10.88□□□□□ -0.67
NME3-210ENST00000567271 HCG22E2RYF7 251 aa10.81□□□□□ -0.68
NME3-210ENST00000567271 CXCL6P80162 114 aa10.81□□□□□ -0.68
NME3-210ENST00000567271 LCE2DQ5TA82 110 aaPredicted RBP10.79□□□□□ -0.68
NME3-210ENST00000567271 Q5W150 140 aa10.79□□□□□ -0.68
NME3-210ENST00000567271 A0A1B0GV90 55 aa10.78□□□□□ -0.68
NME3-210ENST00000567271 ACYP1P07311 99 aa10.78□□□□□ -0.68
NME3-210ENST00000567271 FAM240AA0A1B0GVK7 77 aa10.74□□□□□ -0.69
NME3-210ENST00000567271 IGKV2D-30A0A075B6S6 120 aa10.68□□□□□ -0.7
NME3-210ENST00000567271 IGKV2-30P06310 120 aa10.68□□□□□ -0.7
NME3-210ENST00000567271 C7orf65Q6ZTY9 151 aa10.66□□□□□ -0.7
NME3-210ENST00000567271 FSIP2Q5CZC0 6907 aa10.62□□□□□ -0.71
NME3-210ENST00000567271 KRTAP9-8Q9BYQ0 159 aa10.62□□□□□ -0.71
NME3-210ENST00000567271 ATP5EP2Q5VTU8 51 aa10.61□□□□□ -0.71
NME3-210ENST00000567271 TP53AIP1Q9HCN2 124 aa10.61□□□□□ -0.71
NME3-210ENST00000567271 LINC00643Q86TS7 51 aa10.53□□□□□ -0.72
NME3-210ENST00000567271 HIST1H4AP62805 103 aaKnown RBP10.52□□□□□ -0.73
NME3-210ENST00000567271 H1FX-AS1Q4G0G2 97 aa10.52□□□□□ -0.73
NME3-210ENST00000567271 MT2AP02795 61 aa10.49□□□□□ -0.73
NME3-210ENST00000567271 KRTAP9-6A0A140TA67 174 aa10.48□□□□□ -0.73
NME3-210ENST00000567271 C4orf26Q17RF5 130 aa10.48□□□□□ -0.73
NME3-210ENST00000567271 J3QR89 54 aa10.42□□□□□ -0.74
NME3-210ENST00000567271 A0A087WVE0 104 aa10.41□□□□□ -0.74
NME3-210ENST00000567271 MT1FP04733 61 aa10.41□□□□□ -0.74
NME3-210ENST00000567271 TRAV22A0A0B4J277 110 aa10.39□□□□□ -0.75
NME3-210ENST00000567271 CRCT1Q9UGL9 99 aa10.39□□□□□ -0.75
NME3-210ENST00000567271 USH2AO75445 5202 aa10.38□□□□□ -0.75
NME3-210ENST00000567271 KRTAP10-10P60014 251 aa10.36□□□□□ -0.75
NME3-210ENST00000567271 KRTAP3-1Q9BYR8 98 aa10.36□□□□□ -0.75
NME3-210ENST00000567271 UQCRQO14949 82 aa10.35□□□□□ -0.75
NME3-210ENST00000567271 CYP4F30PQ9H0H9 118 aa10.35□□□□□ -0.75
NME3-210ENST00000567271 LOC101927531A0A1B0GV80 90 aa10.32□□□□□ -0.76
NME3-210ENST00000567271 C1orf64Q8NEQ6 169 aa10.32□□□□□ -0.76
NME3-210ENST00000567271 KRTAP9-3Q9BYQ3 159 aa10.28□□□□□ -0.76
NME3-210ENST00000567271 H0Y9P7 68 aa10.27□□□□□ -0.77
NME3-210ENST00000567271 ATOX1O00244 68 aa10.26□□□□□ -0.77
NME3-210ENST00000567271 SSPOA2VEC9 5147 aa10.25□□□□□ -0.77
NME3-210ENST00000567271 OCR1Q9BZK8 76 aa10.21□□□□□ -0.77
NME3-210ENST00000567271 S4R3F8 94 aa10.2□□□□□ -0.78
NME3-210ENST00000567271 LCE2BO14633 110 aa10.17□□□□□ -0.78
NME3-210ENST00000567271 C5orf47Q569G3 176 aa10.16□□□□□ -0.78
NME3-210ENST00000567271 LCA10Q71F78 164 aa10.15□□□□□ -0.78
NME3-210ENST00000567271 K7ERU9 68 aa10.14□□□□□ -0.79
NME3-210ENST00000567271 LINC00208Q96KT6 92 aa10.13□□□□□ -0.79
NME3-210ENST00000567271 MP68P56378 58 aa10.12□□□□□ -0.79
NME3-210ENST00000567271 CSAG1Q6PB30 78 aa10.11□□□□□ -0.79
NME3-210ENST00000567271 SCGB1A1P11684 91 aa10.08□□□□□ -0.8
NME3-210ENST00000567271 IMUPQ9GZP8 106 aa10.08□□□□□ -0.8
NME3-210ENST00000567271 MT-ATP8P03928 68 aa10.06□□□□□ -0.8
NME3-210ENST00000567271 KLKP1Q107X0 134 aa10.06□□□□□ -0.8
NME3-210ENST00000567271 KRTAP3-3Q9BYR6 98 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms