RNA–Protein interactions for RNA: ENST00000564060.5

CMTM3-207, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-207ENST00000564060 C9orf118A6NHY6 69 aa10.33□□□□□ -0.76
CMTM3-207ENST00000564060 KRTAP16-1A8MUX0 517 aa10.33□□□□□ -0.76
CMTM3-207ENST00000564060 A0A1B0GVX0 72 aa10.32□□□□□ -0.76
CMTM3-207ENST00000564060 C14orf132Q9NPU4 83 aa10.3□□□□□ -0.76
CMTM3-207ENST00000564060 NDUFB1O75438 58 aa10.29□□□□□ -0.76
CMTM3-207ENST00000564060 NOTCH2NLQ7Z3S9 236 aa10.29□□□□□ -0.76
CMTM3-207ENST00000564060 A0A1W2PPM0 123 aa10.28□□□□□ -0.76
CMTM3-207ENST00000564060 H3BT86 120 aa10.28□□□□□ -0.76
CMTM3-207ENST00000564060 TAX1BP3O14907 124 aa10.28□□□□□ -0.76
CMTM3-207ENST00000564060 M0R2T5 61 aa10.26□□□□□ -0.77
CMTM3-207ENST00000564060 A8MWP4 228 aa10.21□□□□□ -0.77
CMTM3-207ENST00000564060 NREPQ16612 68 aa10.19□□□□□ -0.78
CMTM3-207ENST00000564060 MTURNQ8N3F0 131 aa10.17□□□□□ -0.78
CMTM3-207ENST00000564060 KRTAP10-6P60371 365 aaPredicted RBP10.16□□□□□ -0.78
CMTM3-207ENST00000564060 LCE2DQ5TA82 110 aaPredicted RBP10.16□□□□□ -0.78
CMTM3-207ENST00000564060 SPCS1Q9Y6A9 102 aa10.16□□□□□ -0.78
CMTM3-207ENST00000564060 LORP23490 312 aaPredicted RBP10.14□□□□□ -0.79
CMTM3-207ENST00000564060 C8orf17Q9NRJ1 99 aa10.14□□□□□ -0.79
CMTM3-207ENST00000564060 FLGP20930 4061 aaPredicted RBP10.13□□□□□ -0.79
CMTM3-207ENST00000564060 COL5A1-AS1Q5SY13 56 aa10.13□□□□□ -0.79
CMTM3-207ENST00000564060 IGKV3D-7A0A0C4DH55 119 aa10.12□□□□□ -0.79
CMTM3-207ENST00000564060 Q8N9P0 234 aaPredicted RBP10.12□□□□□ -0.79
CMTM3-207ENST00000564060 ZCCHC13Q8WW36 166 aaKnown RBP10.11□□□□□ -0.79
CMTM3-207ENST00000564060 PRR15Q8IV56 129 aa10.1□□□□□ -0.79
CMTM3-207ENST00000564060 RBM12B-AS1Q9P1G2 102 aa10.1□□□□□ -0.79
CMTM3-207ENST00000564060 FAM236DA0A1B0GTK5 79 aa10.09□□□□□ -0.79
CMTM3-207ENST00000564060 FAM236CP0DP71 79 aa10.09□□□□□ -0.79
CMTM3-207ENST00000564060 Q6ZVQ6 151 aa10.07□□□□□ -0.8
CMTM3-207ENST00000564060 HRES1P13985 223 aa10.05□□□□□ -0.8
CMTM3-207ENST00000564060 BPY2O14599 106 aa10.02□□□□□ -0.81
CMTM3-207ENST00000564060 MPLKIPQ8TAP9 179 aa10.02□□□□□ -0.81
CMTM3-207ENST00000564060 TMEM254Q8TBM7 123 aa10.02□□□□□ -0.81
CMTM3-207ENST00000564060 MMP24-AS1A0A0U1RRL7 71 aa10□□□□□ -0.81
CMTM3-207ENST00000564060 K7EP34 96 aa10□□□□□ -0.81
CMTM3-207ENST00000564060 MRPL34Q9BQ48 92 aaKnown RBP10□□□□□ -0.81
CMTM3-207ENST00000564060 KRTAP9-6A0A140TA67 174 aa9.99□□□□□ -0.81
CMTM3-207ENST00000564060 K7EQZ3 153 aa9.99□□□□□ -0.81
CMTM3-207ENST00000564060 SMCPP49901 116 aaPredicted RBP9.99□□□□□ -0.81
CMTM3-207ENST00000564060 SPINK7P58062 85 aa9.98□□□□□ -0.81
CMTM3-207ENST00000564060 hDV103S1A0JD37 113 aa9.97□□□□□ -0.81
CMTM3-207ENST00000564060 GTF2H5Q6ZYL4 71 aa9.95□□□□□ -0.82
CMTM3-207ENST00000564060 PRO0461Q9UI25 63 aa9.95□□□□□ -0.82
CMTM3-207ENST00000564060 NDUFS5O43920 106 aa9.92□□□□□ -0.82
CMTM3-207ENST00000564060 UBL5Q9BZL1 73 aa9.91□□□□□ -0.82
CMTM3-207ENST00000564060 PCP4L1A6NKN8 68 aa9.89□□□□□ -0.83
CMTM3-207ENST00000564060 WFDC13Q8IUB5 93 aa9.86□□□□□ -0.83
CMTM3-207ENST00000564060 F8W1H4 67 aa9.85□□□□□ -0.83
CMTM3-207ENST00000564060 LINC00846Q9NV44 126 aa9.85□□□□□ -0.83
CMTM3-207ENST00000564060 CASC2Q6XLA1 102 aa9.84□□□□□ -0.83
CMTM3-207ENST00000564060 Q8N9L7 120 aa9.83□□□□□ -0.84
CMTM3-207ENST00000564060 CRCT1Q9UGL9 99 aa9.83□□□□□ -0.84
CMTM3-207ENST00000564060 KRTAP9-8Q9BYQ0 159 aa9.81□□□□□ -0.84
CMTM3-207ENST00000564060 HCG22E2RYF7 251 aa9.77□□□□□ -0.85
CMTM3-207ENST00000564060 ETDBQ3ZM63 59 aa9.75□□□□□ -0.85
CMTM3-207ENST00000564060 C7orf65Q6ZTY9 151 aa9.75□□□□□ -0.85
CMTM3-207ENST00000564060 CXCL6P80162 114 aa9.74□□□□□ -0.85
CMTM3-207ENST00000564060 FSIP2Q5CZC0 6907 aa9.73□□□□□ -0.85
CMTM3-207ENST00000564060 IGKV2D-30A0A075B6S6 120 aa9.73□□□□□ -0.85
CMTM3-207ENST00000564060 IGKV2-30P06310 120 aa9.73□□□□□ -0.85
CMTM3-207ENST00000564060 Q5W150 140 aa9.71□□□□□ -0.86
CMTM3-207ENST00000564060 MT2AP02795 61 aa9.69□□□□□ -0.86
CMTM3-207ENST00000564060 H1FX-AS1Q4G0G2 97 aa9.64□□□□□ -0.87
CMTM3-207ENST00000564060 ACYP1P07311 99 aa9.61□□□□□ -0.87
CMTM3-207ENST00000564060 KRTAP10-10P60014 251 aa9.61□□□□□ -0.87
CMTM3-207ENST00000564060 TP53AIP1Q9HCN2 124 aa9.61□□□□□ -0.87
CMTM3-207ENST00000564060 MT1FP04733 61 aa9.6□□□□□ -0.87
CMTM3-207ENST00000564060 FAM240AA0A1B0GVK7 77 aa9.55□□□□□ -0.88
CMTM3-207ENST00000564060 C4orf26Q17RF5 130 aa9.52□□□□□ -0.89
CMTM3-207ENST00000564060 ATP5EP2Q5VTU8 51 aa9.52□□□□□ -0.89
CMTM3-207ENST00000564060 KRTAP9-3Q9BYQ3 159 aa9.49□□□□□ -0.89
CMTM3-207ENST00000564060 LCE2BO14633 110 aa9.41□□□□□ -0.9
CMTM3-207ENST00000564060 HIST1H4AP62805 103 aaKnown RBP9.4□□□□□ -0.9
CMTM3-207ENST00000564060 TRAV22A0A0B4J277 110 aa9.39□□□□□ -0.91
CMTM3-207ENST00000564060 C1orf64Q8NEQ6 169 aa9.39□□□□□ -0.91
CMTM3-207ENST00000564060 USH2AO75445 5202 aa9.38□□□□□ -0.91
CMTM3-207ENST00000564060 LINC00643Q86TS7 51 aa9.35□□□□□ -0.91
CMTM3-207ENST00000564060 LOC101927531A0A1B0GV80 90 aa9.34□□□□□ -0.91
CMTM3-207ENST00000564060 A0A1B0GV90 55 aa9.34□□□□□ -0.91
CMTM3-207ENST00000564060 S4R3F8 94 aa9.34□□□□□ -0.91
CMTM3-207ENST00000564060 KRTAP3-1Q9BYR8 98 aa9.33□□□□□ -0.92
CMTM3-207ENST00000564060 CYP4F30PQ9H0H9 118 aa9.33□□□□□ -0.92
CMTM3-207ENST00000564060 UQCRQO14949 82 aa9.31□□□□□ -0.92
CMTM3-207ENST00000564060 C5orf47Q569G3 176 aa9.29□□□□□ -0.92
CMTM3-207ENST00000564060 ATOX1O00244 68 aa9.28□□□□□ -0.92
CMTM3-207ENST00000564060 CSAG1Q6PB30 78 aa9.27□□□□□ -0.93
CMTM3-207ENST00000564060 SSPOA2VEC9 5147 aa9.27□□□□□ -0.93
CMTM3-207ENST00000564060 H0Y9P7 68 aa9.24□□□□□ -0.93
CMTM3-207ENST00000564060 J3QR89 54 aa9.24□□□□□ -0.93
CMTM3-207ENST00000564060 LCA10Q71F78 164 aa9.24□□□□□ -0.93
CMTM3-207ENST00000564060 A0A087WVE0 104 aa9.23□□□□□ -0.93
CMTM3-207ENST00000564060 KRTAP19-1Q8IUB9 90 aa9.23□□□□□ -0.93
CMTM3-207ENST00000564060 FAM236AA0A1B0GUQ0 79 aa9.21□□□□□ -0.94
CMTM3-207ENST00000564060 FAM236BA0A1B0GV22 79 aa9.21□□□□□ -0.94
CMTM3-207ENST00000564060 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.14□□□□□ -0.95
CMTM3-207ENST00000564060 KRTAP19-6Q3LI70 58 aa9.12□□□□□ -0.95
CMTM3-207ENST00000564060 MP68P56378 58 aa9.11□□□□□ -0.95
CMTM3-207ENST00000564060 LINC00208Q96KT6 92 aa9.09□□□□□ -0.95
CMTM3-207ENST00000564060 OCR1Q9BZK8 76 aa9.09□□□□□ -0.95
CMTM3-207ENST00000564060 A8MUN3 132 aa9.07□□□□□ -0.96
CMTM3-207ENST00000564060 KRTAP3-3Q9BYR6 98 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 145.5 ms