RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 C20orf166-AS1Q96NR2 134 aa8.96□□□□□ -0.98
RPL28-209ENST00000560055 J3KT08 172 aa8.95□□□□□ -0.98
RPL28-209ENST00000560055 A8MUU9 505 aa8.94□□□□□ -0.98
RPL28-209ENST00000560055 LINC00313P59037 77 aa8.94□□□□□ -0.98
RPL28-209ENST00000560055 GTF2H5Q6ZYL4 71 aa8.94□□□□□ -0.98
RPL28-209ENST00000560055 KRTAP16-1A8MUX0 517 aa8.93□□□□□ -0.98
RPL28-209ENST00000560055 NOTCH2NLQ7Z3S9 236 aa8.93□□□□□ -0.98
RPL28-209ENST00000560055 A0A1B0GVX0 72 aa8.92□□□□□ -0.98
RPL28-209ENST00000560055 KRTAP9-2Q9BYQ4 174 aa8.92□□□□□ -0.98
RPL28-209ENST00000560055 IGHV6-1A0A0B4J1U7 121 aa8.91□□□□□ -0.98
RPL28-209ENST00000560055 C8orf87E5RJ46 101 aa8.88□□□□□ -0.99
RPL28-209ENST00000560055 NREPQ16612 68 aa8.88□□□□□ -0.99
RPL28-209ENST00000560055 A8MWP4 228 aa8.87□□□□□ -0.99
RPL28-209ENST00000560055 ATP11AUNQ6ZP68 121 aa8.87□□□□□ -0.99
RPL28-209ENST00000560055 F8W1H4 67 aa8.86□□□□□ -0.99
RPL28-209ENST00000560055 IGKV3D-7A0A0C4DH55 119 aa8.84□□□□□ -0.99
RPL28-209ENST00000560055 NDUFB1O75438 58 aa8.84□□□□□ -0.99
RPL28-209ENST00000560055 KRTAP19-2Q3LHN2 52 aa8.82□□□□□ -1
RPL28-209ENST00000560055 PRR15Q8IV56 129 aa8.81□□□□□ -1
RPL28-209ENST00000560055 Q6ZVQ6 151 aa8.8□□□□□ -1
RPL28-209ENST00000560055 ETDBQ3ZM63 59 aa8.79□□□□□ -1
RPL28-209ENST00000560055 C8orf17Q9NRJ1 99 aa8.79□□□□□ -1
RPL28-209ENST00000560055 LCE2CQ5TA81 110 aa8.78□□□□□ -1
RPL28-209ENST00000560055 LINC00846Q9NV44 126 aa8.77□□□□□ -1.01
RPL28-209ENST00000560055 K7EQZ3 153 aa8.75□□□□□ -1.01
RPL28-209ENST00000560055 BPY2O14599 106 aa8.75□□□□□ -1.01
RPL28-209ENST00000560055 Q8N9P0 234 aaPredicted RBP8.75□□□□□ -1.01
RPL28-209ENST00000560055 FLGP20930 4061 aaPredicted RBP8.75□□□□□ -1.01
RPL28-209ENST00000560055 MMP24-AS1A0A0U1RRL7 71 aa8.72□□□□□ -1.01
RPL28-209ENST00000560055 UBL5Q9BZL1 73 aa8.71□□□□□ -1.02
RPL28-209ENST00000560055 TMEM254Q8TBM7 123 aa8.68□□□□□ -1.02
RPL28-209ENST00000560055 A0A1B0GV90 55 aa8.67□□□□□ -1.02
RPL28-209ENST00000560055 ZCCHC13Q8WW36 166 aaKnown RBP8.67□□□□□ -1.02
RPL28-209ENST00000560055 Q8N9L7 120 aa8.66□□□□□ -1.02
RPL28-209ENST00000560055 hDV103S1A0JD37 113 aa8.65□□□□□ -1.02
RPL28-209ENST00000560055 MRPL34Q9BQ48 92 aaKnown RBP8.65□□□□□ -1.02
RPL28-209ENST00000560055 KRTAP9-6A0A140TA67 174 aa8.64□□□□□ -1.03
RPL28-209ENST00000560055 MT1HP80294 61 aa8.63□□□□□ -1.03
RPL28-209ENST00000560055 COX6B2Q6YFQ2 88 aa8.6□□□□□ -1.03
RPL28-209ENST00000560055 FAM240AA0A1B0GVK7 77 aa8.58□□□□□ -1.04
RPL28-209ENST00000560055 CXCL6P80162 114 aa8.58□□□□□ -1.04
RPL28-209ENST00000560055 ACYP1P07311 99 aa8.57□□□□□ -1.04
RPL28-209ENST00000560055 HRES1P13985 223 aa8.57□□□□□ -1.04
RPL28-209ENST00000560055 CASC2Q6XLA1 102 aa8.57□□□□□ -1.04
RPL28-209ENST00000560055 WFDC13Q8IUB5 93 aa8.57□□□□□ -1.04
RPL28-209ENST00000560055 MPLKIPQ8TAP9 179 aa8.56□□□□□ -1.04
RPL28-209ENST00000560055 LCE2DQ5TA82 110 aaPredicted RBP8.54□□□□□ -1.04
RPL28-209ENST00000560055 HCG22E2RYF7 251 aa8.53□□□□□ -1.04
RPL28-209ENST00000560055 SPINK7P58062 85 aa8.53□□□□□ -1.04
RPL28-209ENST00000560055 NDUFS5O43920 106 aa8.52□□□□□ -1.05
RPL28-209ENST00000560055 Q5W150 140 aa8.47□□□□□ -1.05
RPL28-209ENST00000560055 RBM12B-AS1Q9P1G2 102 aa8.46□□□□□ -1.06
RPL28-209ENST00000560055 ATP5EP2Q5VTU8 51 aa8.45□□□□□ -1.06
RPL28-209ENST00000560055 FAM236DA0A1B0GTK5 79 aa8.42□□□□□ -1.06
RPL28-209ENST00000560055 M0R2T5 61 aa8.42□□□□□ -1.06
RPL28-209ENST00000560055 FAM236CP0DP71 79 aa8.42□□□□□ -1.06
RPL28-209ENST00000560055 LORP23490 312 aaPredicted RBP8.42□□□□□ -1.06
RPL28-209ENST00000560055 KRTAP10-6P60371 365 aaPredicted RBP8.42□□□□□ -1.06
RPL28-209ENST00000560055 FSIP2Q5CZC0 6907 aa8.41□□□□□ -1.06
RPL28-209ENST00000560055 LINC00643Q86TS7 51 aa8.39□□□□□ -1.07
RPL28-209ENST00000560055 CRCT1Q9UGL9 99 aa8.39□□□□□ -1.07
RPL28-209ENST00000560055 IGKV2D-30A0A075B6S6 120 aa8.36□□□□□ -1.07
RPL28-209ENST00000560055 IGKV2-30P06310 120 aa8.36□□□□□ -1.07
RPL28-209ENST00000560055 C7orf65Q6ZTY9 151 aa8.36□□□□□ -1.07
RPL28-209ENST00000560055 TP53AIP1Q9HCN2 124 aa8.36□□□□□ -1.07
RPL28-209ENST00000560055 J3QR89 54 aa8.34□□□□□ -1.07
RPL28-209ENST00000560055 HIST1H4AP62805 103 aaKnown RBP8.32□□□□□ -1.08
RPL28-209ENST00000560055 A0A087WVE0 104 aa8.27□□□□□ -1.09
RPL28-209ENST00000560055 KRTAP9-8Q9BYQ0 159 aa8.22□□□□□ -1.09
RPL28-209ENST00000560055 TRAV22A0A0B4J277 110 aa8.2□□□□□ -1.1
RPL28-209ENST00000560055 C4orf26Q17RF5 130 aa8.2□□□□□ -1.1
RPL28-209ENST00000560055 H1FX-AS1Q4G0G2 97 aa8.2□□□□□ -1.1
RPL28-209ENST00000560055 UQCRQO14949 82 aa8.18□□□□□ -1.1
RPL28-209ENST00000560055 K7ERU9 68 aa8.16□□□□□ -1.1
RPL28-209ENST00000560055 CYP4F30PQ9H0H9 118 aa8.16□□□□□ -1.1
RPL28-209ENST00000560055 LOC101927531A0A1B0GV80 90 aa8.13□□□□□ -1.11
RPL28-209ENST00000560055 KRTAP3-1Q9BYR8 98 aa8.13□□□□□ -1.11
RPL28-209ENST00000560055 OCR1Q9BZK8 76 aa8.13□□□□□ -1.11
RPL28-209ENST00000560055 MT2AP02795 61 aa8.12□□□□□ -1.11
RPL28-209ENST00000560055 H0Y9P7 68 aa8.11□□□□□ -1.11
RPL28-209ENST00000560055 ATOX1O00244 68 aa8.11□□□□□ -1.11
RPL28-209ENST00000560055 C1orf64Q8NEQ6 169 aa8.08□□□□□ -1.12
RPL28-209ENST00000560055 IMUPQ9GZP8 106 aa8.07□□□□□ -1.12
RPL28-209ENST00000560055 MT-ATP8P03928 68 aa8.06□□□□□ -1.12
RPL28-209ENST00000560055 MT1FP04733 61 aa8.06□□□□□ -1.12
RPL28-209ENST00000560055 USH2AO75445 5202 aa8.01□□□□□ -1.13
RPL28-209ENST00000560055 C5orf47Q569G3 176 aa8□□□□□ -1.13
RPL28-209ENST00000560055 LINC00208Q96KT6 92 aa8□□□□□ -1.13
RPL28-209ENST00000560055 SCGB1A1P11684 91 aa7.99□□□□□ -1.13
RPL28-209ENST00000560055 MP68P56378 58 aa7.99□□□□□ -1.13
RPL28-209ENST00000560055 KRTAP10-10P60014 251 aa7.99□□□□□ -1.13
RPL28-209ENST00000560055 SSPOA2VEC9 5147 aa7.99□□□□□ -1.13
RPL28-209ENST00000560055 S4R3F8 94 aa7.97□□□□□ -1.13
RPL28-209ENST00000560055 KRTAP9-3Q9BYQ3 159 aa7.96□□□□□ -1.14
RPL28-209ENST00000560055 H3BPC8 53 aa7.94□□□□□ -1.14
RPL28-209ENST00000560055 KLKP1Q107X0 134 aa7.94□□□□□ -1.14
RPL28-209ENST00000560055 LCA10Q71F78 164 aa7.94□□□□□ -1.14
RPL28-209ENST00000560055 FAM236AA0A1B0GUQ0 79 aa7.91□□□□□ -1.14
RPL28-209ENST00000560055 FAM236BA0A1B0GV22 79 aa7.91□□□□□ -1.14
RPL28-209ENST00000560055 KRTAP3-3Q9BYR6 98 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms