RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 LINC00313P59037 77 aa9.03□□□□□ -0.96
LTBR-215ENST00000546296 NREPQ16612 68 aa9.02□□□□□ -0.97
LTBR-215ENST00000546296 Q75L30 129 aa9□□□□□ -0.97
LTBR-215ENST00000546296 KRTAP4-1Q9BYQ7 146 aa9□□□□□ -0.97
LTBR-215ENST00000546296 ATP11AUNQ6ZP68 121 aa8.99□□□□□ -0.97
LTBR-215ENST00000546296 A0A1B0GVX0 72 aa8.98□□□□□ -0.97
LTBR-215ENST00000546296 NDUFB1O75438 58 aa8.98□□□□□ -0.97
LTBR-215ENST00000546296 F8W1H4 67 aa8.97□□□□□ -0.97
LTBR-215ENST00000546296 NOTCH2NLQ7Z3S9 236 aa8.96□□□□□ -0.98
LTBR-215ENST00000546296 C8orf87E5RJ46 101 aa8.95□□□□□ -0.98
LTBR-215ENST00000546296 C20orf166-AS1Q96NR2 134 aa8.95□□□□□ -0.98
LTBR-215ENST00000546296 A8MUU9 505 aa8.94□□□□□ -0.98
LTBR-215ENST00000546296 A8MWP4 228 aa8.92□□□□□ -0.98
LTBR-215ENST00000546296 KRTAP16-1A8MUX0 517 aa8.91□□□□□ -0.98
LTBR-215ENST00000546296 IGKV3D-7A0A0C4DH55 119 aa8.89□□□□□ -0.99
LTBR-215ENST00000546296 ETDBQ3ZM63 59 aa8.89□□□□□ -0.99
LTBR-215ENST00000546296 BPY2O14599 106 aa8.88□□□□□ -0.99
LTBR-215ENST00000546296 Q6ZVQ6 151 aa8.87□□□□□ -0.99
LTBR-215ENST00000546296 PRR15Q8IV56 129 aa8.86□□□□□ -0.99
LTBR-215ENST00000546296 C8orf17Q9NRJ1 99 aa8.86□□□□□ -0.99
LTBR-215ENST00000546296 FAT4Q6V0I7 4981 aa8.84□□□□□ -0.99
LTBR-215ENST00000546296 UBL5Q9BZL1 73 aa8.84□□□□□ -0.99
LTBR-215ENST00000546296 LINC00846Q9NV44 126 aa8.83□□□□□ -1
LTBR-215ENST00000546296 K7EQZ3 153 aa8.8□□□□□ -1
LTBR-215ENST00000546296 A0A1B0GV90 55 aa8.79□□□□□ -1
LTBR-215ENST00000546296 MMP24-AS1A0A0U1RRL7 71 aa8.76□□□□□ -1.01
LTBR-215ENST00000546296 Q8N9L7 120 aa8.75□□□□□ -1.01
LTBR-215ENST00000546296 Q8N9P0 234 aaPredicted RBP8.75□□□□□ -1.01
LTBR-215ENST00000546296 hDV103S1A0JD37 113 aa8.74□□□□□ -1.01
LTBR-215ENST00000546296 TMEM254Q8TBM7 123 aa8.74□□□□□ -1.01
LTBR-215ENST00000546296 MRPL34Q9BQ48 92 aaKnown RBP8.73□□□□□ -1.01
LTBR-215ENST00000546296 COX6B2Q6YFQ2 88 aa8.72□□□□□ -1.01
LTBR-215ENST00000546296 ZCCHC13Q8WW36 166 aaKnown RBP8.72□□□□□ -1.01
LTBR-215ENST00000546296 LCE2AQ5TA79 106 aaPredicted RBP8.71□□□□□ -1.02
LTBR-215ENST00000546296 KRTAP19-2Q3LHN2 52 aa8.7□□□□□ -1.02
LTBR-215ENST00000546296 NDUFS5O43920 106 aa8.69□□□□□ -1.02
LTBR-215ENST00000546296 LCE2CQ5TA81 110 aa8.69□□□□□ -1.02
LTBR-215ENST00000546296 ACYP1P07311 99 aa8.68□□□□□ -1.02
LTBR-215ENST00000546296 CASC2Q6XLA1 102 aa8.68□□□□□ -1.02
LTBR-215ENST00000546296 WFDC13Q8IUB5 93 aa8.68□□□□□ -1.02
LTBR-215ENST00000546296 CXCL6P80162 114 aa8.65□□□□□ -1.02
LTBR-215ENST00000546296 FAM240AA0A1B0GVK7 77 aa8.63□□□□□ -1.03
LTBR-215ENST00000546296 HCG22E2RYF7 251 aa8.61□□□□□ -1.03
LTBR-215ENST00000546296 SPINK7P58062 85 aa8.6□□□□□ -1.03
LTBR-215ENST00000546296 MT1HP80294 61 aa8.58□□□□□ -1.04
LTBR-215ENST00000546296 RBM12B-AS1Q9P1G2 102 aa8.58□□□□□ -1.04
LTBR-215ENST00000546296 FAM236DA0A1B0GTK5 79 aa8.56□□□□□ -1.04
LTBR-215ENST00000546296 FAM236CP0DP71 79 aa8.56□□□□□ -1.04
LTBR-215ENST00000546296 HRES1P13985 223 aa8.56□□□□□ -1.04
LTBR-215ENST00000546296 M0R2T5 61 aa8.55□□□□□ -1.04
LTBR-215ENST00000546296 ATP5EP2Q5VTU8 51 aa8.53□□□□□ -1.04
LTBR-215ENST00000546296 Q5W150 140 aa8.51□□□□□ -1.05
LTBR-215ENST00000546296 J3QR89 54 aa8.5□□□□□ -1.05
LTBR-215ENST00000546296 MPLKIPQ8TAP9 179 aa8.5□□□□□ -1.05
LTBR-215ENST00000546296 HIST1H4AP62805 103 aaKnown RBP8.49□□□□□ -1.05
LTBR-215ENST00000546296 LINC00643Q86TS7 51 aa8.49□□□□□ -1.05
LTBR-215ENST00000546296 FLGP20930 4061 aaPredicted RBP8.48□□□□□ -1.05
LTBR-215ENST00000546296 IGKV2D-30A0A075B6S6 120 aa8.47□□□□□ -1.05
LTBR-215ENST00000546296 IGKV2-30P06310 120 aa8.47□□□□□ -1.05
LTBR-215ENST00000546296 TP53AIP1Q9HCN2 124 aa8.45□□□□□ -1.06
LTBR-215ENST00000546296 C7orf65Q6ZTY9 151 aa8.43□□□□□ -1.06
LTBR-215ENST00000546296 KRTAP10-6P60371 365 aaPredicted RBP8.38□□□□□ -1.07
LTBR-215ENST00000546296 A0A087WVE0 104 aa8.35□□□□□ -1.07
LTBR-215ENST00000546296 LORP23490 312 aaPredicted RBP8.34□□□□□ -1.07
LTBR-215ENST00000546296 K7ERU9 68 aa8.3□□□□□ -1.08
LTBR-215ENST00000546296 TRAV22A0A0B4J277 110 aa8.28□□□□□ -1.08
LTBR-215ENST00000546296 UQCRQO14949 82 aa8.28□□□□□ -1.08
LTBR-215ENST00000546296 C4orf26Q17RF5 130 aa8.28□□□□□ -1.08
LTBR-215ENST00000546296 H1FX-AS1Q4G0G2 97 aa8.27□□□□□ -1.09
LTBR-215ENST00000546296 KRTAP9-2Q9BYQ4 174 aa8.26□□□□□ -1.09
LTBR-215ENST00000546296 LOC101927531A0A1B0GV80 90 aa8.22□□□□□ -1.09
LTBR-215ENST00000546296 H0Y9P7 68 aa8.22□□□□□ -1.09
LTBR-215ENST00000546296 ATOX1O00244 68 aa8.21□□□□□ -1.1
LTBR-215ENST00000546296 CYP4F30PQ9H0H9 118 aa8.21□□□□□ -1.1
LTBR-215ENST00000546296 LCE2DQ5TA82 110 aaPredicted RBP8.19□□□□□ -1.1
LTBR-215ENST00000546296 SCGB1A1P11684 91 aa8.18□□□□□ -1.1
LTBR-215ENST00000546296 C1orf64Q8NEQ6 169 aa8.18□□□□□ -1.1
LTBR-215ENST00000546296 MT-ATP8P03928 68 aa8.16□□□□□ -1.1
LTBR-215ENST00000546296 KRTAP9-8Q9BYQ0 159 aa8.16□□□□□ -1.1
LTBR-215ENST00000546296 OCR1Q9BZK8 76 aa8.16□□□□□ -1.1
LTBR-215ENST00000546296 IMUPQ9GZP8 106 aa8.15□□□□□ -1.1
LTBR-215ENST00000546296 MP68P56378 58 aa8.14□□□□□ -1.11
LTBR-215ENST00000546296 LINC00208Q96KT6 92 aa8.12□□□□□ -1.11
LTBR-215ENST00000546296 KRTAP3-1Q9BYR8 98 aa8.12□□□□□ -1.11
LTBR-215ENST00000546296 C5orf47Q569G3 176 aa8.1□□□□□ -1.11
LTBR-215ENST00000546296 MT2AP02795 61 aa8.09□□□□□ -1.11
LTBR-215ENST00000546296 KRTAP10-10P60014 251 aa8.06□□□□□ -1.12
LTBR-215ENST00000546296 S4R3F8 94 aa8.06□□□□□ -1.12
LTBR-215ENST00000546296 FAM236AA0A1B0GUQ0 79 aa8.02□□□□□ -1.13
LTBR-215ENST00000546296 FAM236BA0A1B0GV22 79 aa8.02□□□□□ -1.13
LTBR-215ENST00000546296 H3BPC8 53 aa8.02□□□□□ -1.13
LTBR-215ENST00000546296 MT1FP04733 61 aa8.02□□□□□ -1.13
LTBR-215ENST00000546296 KLKP1Q107X0 134 aa8.01□□□□□ -1.13
LTBR-215ENST00000546296 SMIM20Q8N5G0 67 aa7.99□□□□□ -1.13
LTBR-215ENST00000546296 LCA10Q71F78 164 aa7.98□□□□□ -1.13
LTBR-215ENST00000546296 CSAG1Q6PB30 78 aa7.97□□□□□ -1.13
LTBR-215ENST00000546296 FSIP2Q5CZC0 6907 aa7.97□□□□□ -1.13
LTBR-215ENST00000546296 TRAV7A0A075B6U4 112 aa7.96□□□□□ -1.14
LTBR-215ENST00000546296 A8MUN3 132 aa7.92□□□□□ -1.14
LTBR-215ENST00000546296 KRTAP9-6A0A140TA67 174 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 226.8 ms