RNA–Protein interactions for RNA: ENST00000544454.5

LTBR-213, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-213ENST00000544454 DEFB116Q30KQ4 102 aa7.34□□□□□ -1.23
LTBR-213ENST00000544454 KRTAP4-1Q9BYQ7 146 aa7.34□□□□□ -1.23
LTBR-213ENST00000544454 Q75L30 129 aa7.33□□□□□ -1.24
LTBR-213ENST00000544454 J3KT08 172 aa7.32□□□□□ -1.24
LTBR-213ENST00000544454 FAT4Q6V0I7 4981 aa7.31□□□□□ -1.24
LTBR-213ENST00000544454 K7EP34 96 aa7.31□□□□□ -1.24
LTBR-213ENST00000544454 LINC00313P59037 77 aa7.31□□□□□ -1.24
LTBR-213ENST00000544454 DSCR10P59022 87 aa7.3□□□□□ -1.24
LTBR-213ENST00000544454 C20orf166-AS1Q96NR2 134 aa7.29□□□□□ -1.24
LTBR-213ENST00000544454 A8MUU9 505 aa7.28□□□□□ -1.24
LTBR-213ENST00000544454 ATP11AUNQ6ZP68 121 aa7.28□□□□□ -1.24
LTBR-213ENST00000544454 GTF2H5Q6ZYL4 71 aa7.28□□□□□ -1.24
LTBR-213ENST00000544454 PRO0461Q9UI25 63 aa7.28□□□□□ -1.24
LTBR-213ENST00000544454 IGHV6-1A0A0B4J1U7 121 aa7.27□□□□□ -1.25
LTBR-213ENST00000544454 NREPQ16612 68 aa7.27□□□□□ -1.25
LTBR-213ENST00000544454 A0A1B0GVX0 72 aa7.26□□□□□ -1.25
LTBR-213ENST00000544454 C8orf87E5RJ46 101 aa7.25□□□□□ -1.25
LTBR-213ENST00000544454 NDUFB1O75438 58 aa7.25□□□□□ -1.25
LTBR-213ENST00000544454 NOTCH2NLQ7Z3S9 236 aa7.25□□□□□ -1.25
LTBR-213ENST00000544454 KRTAP16-1A8MUX0 517 aa7.24□□□□□ -1.25
LTBR-213ENST00000544454 A8MWP4 228 aa7.22□□□□□ -1.25
LTBR-213ENST00000544454 F8W1H4 67 aa7.22□□□□□ -1.25
LTBR-213ENST00000544454 IGKV3D-7A0A0C4DH55 119 aa7.19□□□□□ -1.26
LTBR-213ENST00000544454 PRR15Q8IV56 129 aa7.17□□□□□ -1.26
LTBR-213ENST00000544454 KRTAP19-2Q3LHN2 52 aa7.15□□□□□ -1.26
LTBR-213ENST00000544454 C8orf17Q9NRJ1 99 aa7.15□□□□□ -1.26
LTBR-213ENST00000544454 BPY2O14599 106 aa7.14□□□□□ -1.27
LTBR-213ENST00000544454 Q6ZVQ6 151 aa7.14□□□□□ -1.27
LTBR-213ENST00000544454 ETDBQ3ZM63 59 aa7.13□□□□□ -1.27
LTBR-213ENST00000544454 Q8N9P0 234 aaPredicted RBP7.12□□□□□ -1.27
LTBR-213ENST00000544454 UBL5Q9BZL1 73 aa7.11□□□□□ -1.27
LTBR-213ENST00000544454 LINC00846Q9NV44 126 aa7.11□□□□□ -1.27
LTBR-213ENST00000544454 K7EQZ3 153 aa7.09□□□□□ -1.27
LTBR-213ENST00000544454 MMP24-AS1A0A0U1RRL7 71 aa7.08□□□□□ -1.28
LTBR-213ENST00000544454 TMEM254Q8TBM7 123 aa7.06□□□□□ -1.28
LTBR-213ENST00000544454 ZCCHC13Q8WW36 166 aaKnown RBP7.06□□□□□ -1.28
LTBR-213ENST00000544454 hDV103S1A0JD37 113 aa7.05□□□□□ -1.28
LTBR-213ENST00000544454 COX6B2Q6YFQ2 88 aa7.05□□□□□ -1.28
LTBR-213ENST00000544454 MRPL34Q9BQ48 92 aaKnown RBP7.05□□□□□ -1.28
LTBR-213ENST00000544454 Q8N9L7 120 aa7.03□□□□□ -1.28
LTBR-213ENST00000544454 MT1HP80294 61 aa7.02□□□□□ -1.29
LTBR-213ENST00000544454 ACYP1P07311 99 aa7□□□□□ -1.29
LTBR-213ENST00000544454 A0A1B0GV90 55 aa6.99□□□□□ -1.29
LTBR-213ENST00000544454 SPINK7P58062 85 aa6.98□□□□□ -1.29
LTBR-213ENST00000544454 CXCL6P80162 114 aa6.98□□□□□ -1.29
LTBR-213ENST00000544454 CASC2Q6XLA1 102 aa6.98□□□□□ -1.29
LTBR-213ENST00000544454 FLGP20930 4061 aaPredicted RBP6.97□□□□□ -1.29
LTBR-213ENST00000544454 NDUFS5O43920 106 aa6.97□□□□□ -1.29
LTBR-213ENST00000544454 FAM240AA0A1B0GVK7 77 aa6.96□□□□□ -1.3
LTBR-213ENST00000544454 HRES1P13985 223 aa6.96□□□□□ -1.3
LTBR-213ENST00000544454 WFDC13Q8IUB5 93 aa6.96□□□□□ -1.3
LTBR-213ENST00000544454 MPLKIPQ8TAP9 179 aa6.96□□□□□ -1.3
LTBR-213ENST00000544454 RBM12B-AS1Q9P1G2 102 aa6.95□□□□□ -1.3
LTBR-213ENST00000544454 HCG22E2RYF7 251 aa6.94□□□□□ -1.3
LTBR-213ENST00000544454 M0R2T5 61 aa6.92□□□□□ -1.3
LTBR-213ENST00000544454 FAM236DA0A1B0GTK5 79 aa6.9□□□□□ -1.3
LTBR-213ENST00000544454 FAM236CP0DP71 79 aa6.9□□□□□ -1.3
LTBR-213ENST00000544454 Q5W150 140 aa6.89□□□□□ -1.31
LTBR-213ENST00000544454 ATP5EP2Q5VTU8 51 aa6.87□□□□□ -1.31
LTBR-213ENST00000544454 LOC100996750A0A140TA64 210 aa6.86□□□□□ -1.31
LTBR-213ENST00000544454 KRTAP10-6P60371 365 aaPredicted RBP6.86□□□□□ -1.31
LTBR-213ENST00000544454 KRTAP4-6Q9BYQ5 205 aa6.86□□□□□ -1.31
LTBR-213ENST00000544454 LINC00643Q86TS7 51 aa6.83□□□□□ -1.32
LTBR-213ENST00000544454 TP53AIP1Q9HCN2 124 aa6.83□□□□□ -1.32
LTBR-213ENST00000544454 IGKV2D-30A0A075B6S6 120 aa6.82□□□□□ -1.32
LTBR-213ENST00000544454 IGKV2-30P06310 120 aa6.82□□□□□ -1.32
LTBR-213ENST00000544454 C7orf65Q6ZTY9 151 aa6.81□□□□□ -1.32
LTBR-213ENST00000544454 J3QR89 54 aa6.8□□□□□ -1.32
LTBR-213ENST00000544454 KRTAP9-2Q9BYQ4 174 aa6.8□□□□□ -1.32
LTBR-213ENST00000544454 HIST1H4AP62805 103 aaKnown RBP6.78□□□□□ -1.32
LTBR-213ENST00000544454 H1FX-AS1Q4G0G2 97 aa6.71□□□□□ -1.34
LTBR-213ENST00000544454 KRTAP9-8Q9BYQ0 159 aa6.7□□□□□ -1.34
LTBR-213ENST00000544454 A0A087WVE0 104 aa6.69□□□□□ -1.34
LTBR-213ENST00000544454 C4orf26Q17RF5 130 aa6.68□□□□□ -1.34
LTBR-213ENST00000544454 TRAV22A0A0B4J277 110 aa6.67□□□□□ -1.34
LTBR-213ENST00000544454 UQCRQO14949 82 aa6.67□□□□□ -1.34
LTBR-213ENST00000544454 CYP4F30PQ9H0H9 118 aa6.65□□□□□ -1.34
LTBR-213ENST00000544454 LOC101927531A0A1B0GV80 90 aa6.63□□□□□ -1.35
LTBR-213ENST00000544454 K7ERU9 68 aa6.63□□□□□ -1.35
LTBR-213ENST00000544454 ATOX1O00244 68 aa6.62□□□□□ -1.35
LTBR-213ENST00000544454 MT2AP02795 61 aa6.61□□□□□ -1.35
LTBR-213ENST00000544454 H0Y9P7 68 aa6.6□□□□□ -1.35
LTBR-213ENST00000544454 C1orf64Q8NEQ6 169 aa6.6□□□□□ -1.35
LTBR-213ENST00000544454 KRTAP3-1Q9BYR8 98 aa6.6□□□□□ -1.35
LTBR-213ENST00000544454 FSIP2Q5CZC0 6907 aa6.6□□□□□ -1.35
LTBR-213ENST00000544454 OCR1Q9BZK8 76 aa6.58□□□□□ -1.36
LTBR-213ENST00000544454 IMUPQ9GZP8 106 aa6.57□□□□□ -1.36
LTBR-213ENST00000544454 MT1FP04733 61 aa6.55□□□□□ -1.36
LTBR-213ENST00000544454 KRTAP10-10P60014 251 aa6.54□□□□□ -1.36
LTBR-213ENST00000544454 SCGB1A1P11684 91 aa6.53□□□□□ -1.36
LTBR-213ENST00000544454 MP68P56378 58 aa6.53□□□□□ -1.36
LTBR-213ENST00000544454 C5orf47Q569G3 176 aa6.53□□□□□ -1.36
LTBR-213ENST00000544454 LINC00208Q96KT6 92 aa6.52□□□□□ -1.37
LTBR-213ENST00000544454 KRTAP9-6A0A140TA67 174 aa6.51□□□□□ -1.37
LTBR-213ENST00000544454 MT-ATP8P03928 68 aa6.51□□□□□ -1.37
LTBR-213ENST00000544454 S4R3F8 94 aa6.5□□□□□ -1.37
LTBR-213ENST00000544454 H3BPC8 53 aa6.48□□□□□ -1.37
LTBR-213ENST00000544454 KRTAP9-3Q9BYQ3 159 aa6.48□□□□□ -1.37
LTBR-213ENST00000544454 CRCT1Q9UGL9 99 aa6.48□□□□□ -1.37
LTBR-213ENST00000544454 CSAG1Q6PB30 78 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms