RNA–Protein interactions for RNA: ENST00000539804.1

PITX3-202, Transcript of paired like homeodomain 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PITX3, Length 1,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITX3-202ENST00000539804 A0A1B0GVX0 72 aa12.68□□□□□ -0.38
PITX3-202ENST00000539804 A0A1W2PPM0 123 aa12.68□□□□□ -0.38
PITX3-202ENST00000539804 H3BT86 120 aa12.68□□□□□ -0.38
PITX3-202ENST00000539804 TAX1BP3O14907 124 aa12.65□□□□□ -0.38
PITX3-202ENST00000539804 C14orf132Q9NPU4 83 aa12.65□□□□□ -0.38
PITX3-202ENST00000539804 KRTAP16-1A8MUX0 517 aa12.62□□□□□ -0.39
PITX3-202ENST00000539804 MT1HP80294 61 aa12.61□□□□□ -0.39
PITX3-202ENST00000539804 NREPQ16612 68 aa12.57□□□□□ -0.4
PITX3-202ENST00000539804 A8MWP4 228 aa12.56□□□□□ -0.4
PITX3-202ENST00000539804 NOTCH2NLQ7Z3S9 236 aa12.56□□□□□ -0.4
PITX3-202ENST00000539804 COL5A1-AS1Q5SY13 56 aa12.55□□□□□ -0.4
PITX3-202ENST00000539804 KRTAP9-2Q9BYQ4 174 aa12.55□□□□□ -0.4
PITX3-202ENST00000539804 M0R2T5 61 aa12.54□□□□□ -0.4
PITX3-202ENST00000539804 SPCS1Q9Y6A9 102 aa12.53□□□□□ -0.4
PITX3-202ENST00000539804 C8orf17Q9NRJ1 99 aa12.45□□□□□ -0.42
PITX3-202ENST00000539804 MTURNQ8N3F0 131 aa12.44□□□□□ -0.42
PITX3-202ENST00000539804 PRR15Q8IV56 129 aa12.43□□□□□ -0.42
PITX3-202ENST00000539804 RBM12B-AS1Q9P1G2 102 aa12.43□□□□□ -0.42
PITX3-202ENST00000539804 IGKV3D-7A0A0C4DH55 119 aa12.42□□□□□ -0.42
PITX3-202ENST00000539804 Q8N9P0 234 aaPredicted RBP12.42□□□□□ -0.42
PITX3-202ENST00000539804 ZCCHC13Q8WW36 166 aaKnown RBP12.41□□□□□ -0.42
PITX3-202ENST00000539804 LCE2DQ5TA82 110 aaPredicted RBP12.38□□□□□ -0.43
PITX3-202ENST00000539804 Q6ZVQ6 151 aa12.38□□□□□ -0.43
PITX3-202ENST00000539804 FAM236DA0A1B0GTK5 79 aa12.36□□□□□ -0.43
PITX3-202ENST00000539804 FAM236CP0DP71 79 aa12.36□□□□□ -0.43
PITX3-202ENST00000539804 KRTAP10-6P60371 365 aaPredicted RBP12.36□□□□□ -0.43
PITX3-202ENST00000539804 BPY2O14599 106 aa12.35□□□□□ -0.43
PITX3-202ENST00000539804 K7EP34 96 aa12.33□□□□□ -0.44
PITX3-202ENST00000539804 LORP23490 312 aaPredicted RBP12.33□□□□□ -0.44
PITX3-202ENST00000539804 GTF2H5Q6ZYL4 71 aa12.33□□□□□ -0.44
PITX3-202ENST00000539804 TMEM254Q8TBM7 123 aa12.33□□□□□ -0.44
PITX3-202ENST00000539804 FLGP20930 4061 aaPredicted RBP12.29□□□□□ -0.44
PITX3-202ENST00000539804 MRPL34Q9BQ48 92 aaKnown RBP12.29□□□□□ -0.44
PITX3-202ENST00000539804 hDV103S1A0JD37 113 aa12.27□□□□□ -0.45
PITX3-202ENST00000539804 HRES1P13985 223 aa12.26□□□□□ -0.45
PITX3-202ENST00000539804 SMCPP49901 116 aaPredicted RBP12.26□□□□□ -0.45
PITX3-202ENST00000539804 MMP24-AS1A0A0U1RRL7 71 aa12.25□□□□□ -0.45
PITX3-202ENST00000539804 K7EQZ3 153 aa12.25□□□□□ -0.45
PITX3-202ENST00000539804 SPINK7P58062 85 aa12.25□□□□□ -0.45
PITX3-202ENST00000539804 MPLKIPQ8TAP9 179 aa12.25□□□□□ -0.45
PITX3-202ENST00000539804 UBL5Q9BZL1 73 aa12.25□□□□□ -0.45
PITX3-202ENST00000539804 PRO0461Q9UI25 63 aa12.24□□□□□ -0.45
PITX3-202ENST00000539804 F8W1H4 67 aa12.21□□□□□ -0.45
PITX3-202ENST00000539804 PCP4L1A6NKN8 68 aa12.2□□□□□ -0.46
PITX3-202ENST00000539804 NDUFS5O43920 106 aa12.19□□□□□ -0.46
PITX3-202ENST00000539804 KRTAP9-6A0A140TA67 174 aa12.11□□□□□ -0.47
PITX3-202ENST00000539804 CASC2Q6XLA1 102 aa12.11□□□□□ -0.47
PITX3-202ENST00000539804 WFDC13Q8IUB5 93 aa12.11□□□□□ -0.47
PITX3-202ENST00000539804 LINC00846Q9NV44 126 aa12.11□□□□□ -0.47
PITX3-202ENST00000539804 CXCL6P80162 114 aa12.03□□□□□ -0.48
PITX3-202ENST00000539804 Q8N9L7 120 aa12.03□□□□□ -0.48
PITX3-202ENST00000539804 ETDBQ3ZM63 59 aa12.02□□□□□ -0.49
PITX3-202ENST00000539804 HCG22E2RYF7 251 aa12□□□□□ -0.49
PITX3-202ENST00000539804 C7orf65Q6ZTY9 151 aa11.99□□□□□ -0.49
PITX3-202ENST00000539804 ACYP1P07311 99 aa11.93□□□□□ -0.5
PITX3-202ENST00000539804 KRTAP9-8Q9BYQ0 159 aa11.93□□□□□ -0.5
PITX3-202ENST00000539804 CRCT1Q9UGL9 99 aa11.93□□□□□ -0.5
PITX3-202ENST00000539804 IGKV2D-30A0A075B6S6 120 aa11.92□□□□□ -0.5
PITX3-202ENST00000539804 IGKV2-30P06310 120 aa11.92□□□□□ -0.5
PITX3-202ENST00000539804 Q5W150 140 aa11.88□□□□□ -0.51
PITX3-202ENST00000539804 TP53AIP1Q9HCN2 124 aa11.88□□□□□ -0.51
PITX3-202ENST00000539804 H1FX-AS1Q4G0G2 97 aa11.85□□□□□ -0.51
PITX3-202ENST00000539804 FAM240AA0A1B0GVK7 77 aa11.82□□□□□ -0.52
PITX3-202ENST00000539804 ATP5EP2Q5VTU8 51 aa11.79□□□□□ -0.52
PITX3-202ENST00000539804 MT2AP02795 61 aa11.78□□□□□ -0.52
PITX3-202ENST00000539804 KRTAP10-10P60014 251 aa11.75□□□□□ -0.53
PITX3-202ENST00000539804 FSIP2Q5CZC0 6907 aa11.75□□□□□ -0.53
PITX3-202ENST00000539804 MT1FP04733 61 aa11.66□□□□□ -0.54
PITX3-202ENST00000539804 C4orf26Q17RF5 130 aa11.66□□□□□ -0.54
PITX3-202ENST00000539804 HIST1H4AP62805 103 aaKnown RBP11.6□□□□□ -0.55
PITX3-202ENST00000539804 LINC00643Q86TS7 51 aa11.57□□□□□ -0.56
PITX3-202ENST00000539804 TRAV22A0A0B4J277 110 aa11.56□□□□□ -0.56
PITX3-202ENST00000539804 KRTAP9-3Q9BYQ3 159 aa11.56□□□□□ -0.56
PITX3-202ENST00000539804 LOC101927531A0A1B0GV80 90 aa11.53□□□□□ -0.56
PITX3-202ENST00000539804 C1orf64Q8NEQ6 169 aa11.53□□□□□ -0.56
PITX3-202ENST00000539804 J3QR89 54 aa11.51□□□□□ -0.57
PITX3-202ENST00000539804 UQCRQO14949 82 aa11.51□□□□□ -0.57
PITX3-202ENST00000539804 A0A1B0GV90 55 aa11.5□□□□□ -0.57
PITX3-202ENST00000539804 ATOX1O00244 68 aa11.5□□□□□ -0.57
PITX3-202ENST00000539804 CYP4F30PQ9H0H9 118 aa11.48□□□□□ -0.57
PITX3-202ENST00000539804 S4R3F8 94 aa11.48□□□□□ -0.57
PITX3-202ENST00000539804 LCE2BO14633 110 aa11.41□□□□□ -0.58
PITX3-202ENST00000539804 CSAG1Q6PB30 78 aa11.41□□□□□ -0.58
PITX3-202ENST00000539804 KRTAP3-1Q9BYR8 98 aa11.39□□□□□ -0.59
PITX3-202ENST00000539804 H0Y9P7 68 aa11.37□□□□□ -0.59
PITX3-202ENST00000539804 C5orf47Q569G3 176 aa11.37□□□□□ -0.59
PITX3-202ENST00000539804 USH2AO75445 5202 aa11.32□□□□□ -0.6
PITX3-202ENST00000539804 A0A087WVE0 104 aa11.32□□□□□ -0.6
PITX3-202ENST00000539804 LCA10Q71F78 164 aa11.31□□□□□ -0.6
PITX3-202ENST00000539804 FAM236AA0A1B0GUQ0 79 aa11.29□□□□□ -0.6
PITX3-202ENST00000539804 FAM236BA0A1B0GV22 79 aa11.29□□□□□ -0.6
PITX3-202ENST00000539804 MP68P56378 58 aa11.28□□□□□ -0.6
PITX3-202ENST00000539804 A8MUN3 132 aa11.22□□□□□ -0.61
PITX3-202ENST00000539804 KRTAP19-1Q8IUB9 90 aa11.2□□□□□ -0.62
PITX3-202ENST00000539804 LINC00208Q96KT6 92 aa11.19□□□□□ -0.62
PITX3-202ENST00000539804 OCR1Q9BZK8 76 aa11.19□□□□□ -0.62
PITX3-202ENST00000539804 SSPOA2VEC9 5147 aa11.18□□□□□ -0.62
PITX3-202ENST00000539804 H3BPC8 53 aa11.17□□□□□ -0.62
PITX3-202ENST00000539804 SCGB1A1P11684 91 aa11.16□□□□□ -0.62
PITX3-202ENST00000539804 NDUFC1O43677 76 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms