RNA–Protein interactions for RNA: ENST00000525936.1

EXOSC4-202, Transcript of exosome component 4, humanhuman

TSL 3 BASIC

Gene EXOSC4, Length 606 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-202ENST00000525936 KRTAP16-1A8MUX0 517 aa10.42□□□□□ -0.74
EXOSC4-202ENST00000525936 NOTCH2NLQ7Z3S9 236 aa10.42□□□□□ -0.74
EXOSC4-202ENST00000525936 ATP11AUNQ6ZP68 121 aa10.41□□□□□ -0.74
EXOSC4-202ENST00000525936 LCE2CQ5TA81 110 aa10.4□□□□□ -0.74
EXOSC4-202ENST00000525936 J3KT08 172 aa10.39□□□□□ -0.75
EXOSC4-202ENST00000525936 A0A1B0GVX0 72 aa10.37□□□□□ -0.75
EXOSC4-202ENST00000525936 SMCPP49901 116 aaPredicted RBP10.37□□□□□ -0.75
EXOSC4-202ENST00000525936 IGHV6-1A0A0B4J1U7 121 aa10.36□□□□□ -0.75
EXOSC4-202ENST00000525936 PCP4L1A6NKN8 68 aa10.36□□□□□ -0.75
EXOSC4-202ENST00000525936 PRO0461Q9UI25 63 aa10.35□□□□□ -0.75
EXOSC4-202ENST00000525936 C8orf87E5RJ46 101 aa10.33□□□□□ -0.76
EXOSC4-202ENST00000525936 K7EP34 96 aa10.33□□□□□ -0.76
EXOSC4-202ENST00000525936 A8MWP4 228 aa10.29□□□□□ -0.76
EXOSC4-202ENST00000525936 NREPQ16612 68 aa10.29□□□□□ -0.76
EXOSC4-202ENST00000525936 NDUFB1O75438 58 aa10.27□□□□□ -0.77
EXOSC4-202ENST00000525936 IGKV3D-7A0A0C4DH55 119 aa10.26□□□□□ -0.77
EXOSC4-202ENST00000525936 GTF2H5Q6ZYL4 71 aa10.22□□□□□ -0.77
EXOSC4-202ENST00000525936 MT1HP80294 61 aa10.21□□□□□ -0.77
EXOSC4-202ENST00000525936 PRR15Q8IV56 129 aa10.21□□□□□ -0.77
EXOSC4-202ENST00000525936 C8orf17Q9NRJ1 99 aa10.2□□□□□ -0.78
EXOSC4-202ENST00000525936 Q8N9P0 234 aaPredicted RBP10.19□□□□□ -0.78
EXOSC4-202ENST00000525936 FLGP20930 4061 aaPredicted RBP10.18□□□□□ -0.78
EXOSC4-202ENST00000525936 F8W1H4 67 aa10.17□□□□□ -0.78
EXOSC4-202ENST00000525936 Q6ZVQ6 151 aa10.15□□□□□ -0.78
EXOSC4-202ENST00000525936 MMP24-AS1A0A0U1RRL7 71 aa10.12□□□□□ -0.79
EXOSC4-202ENST00000525936 K7EQZ3 153 aa10.12□□□□□ -0.79
EXOSC4-202ENST00000525936 BPY2O14599 106 aa10.12□□□□□ -0.79
EXOSC4-202ENST00000525936 COX6B2Q6YFQ2 88 aa10.12□□□□□ -0.79
EXOSC4-202ENST00000525936 ZCCHC13Q8WW36 166 aaKnown RBP10.11□□□□□ -0.79
EXOSC4-202ENST00000525936 LINC00846Q9NV44 126 aa10.1□□□□□ -0.79
EXOSC4-202ENST00000525936 ETDBQ3ZM63 59 aa10.07□□□□□ -0.8
EXOSC4-202ENST00000525936 TMEM254Q8TBM7 123 aa10.07□□□□□ -0.8
EXOSC4-202ENST00000525936 MPLKIPQ8TAP9 179 aa10.06□□□□□ -0.8
EXOSC4-202ENST00000525936 MRPL34Q9BQ48 92 aaKnown RBP10.05□□□□□ -0.8
EXOSC4-202ENST00000525936 HRES1P13985 223 aa10.04□□□□□ -0.8
EXOSC4-202ENST00000525936 hDV103S1A0JD37 113 aa10.03□□□□□ -0.8
EXOSC4-202ENST00000525936 UBL5Q9BZL1 73 aa10.03□□□□□ -0.8
EXOSC4-202ENST00000525936 Q8N9L7 120 aa10.01□□□□□ -0.81
EXOSC4-202ENST00000525936 LORP23490 312 aaPredicted RBP9.98□□□□□ -0.81
EXOSC4-202ENST00000525936 SPINK7P58062 85 aa9.98□□□□□ -0.81
EXOSC4-202ENST00000525936 KRTAP9-2Q9BYQ4 174 aa9.98□□□□□ -0.81
EXOSC4-202ENST00000525936 KRTAP10-6P60371 365 aaPredicted RBP9.97□□□□□ -0.81
EXOSC4-202ENST00000525936 M0R2T5 61 aa9.95□□□□□ -0.82
EXOSC4-202ENST00000525936 CASC2Q6XLA1 102 aa9.92□□□□□ -0.82
EXOSC4-202ENST00000525936 RBM12B-AS1Q9P1G2 102 aa9.92□□□□□ -0.82
EXOSC4-202ENST00000525936 WFDC13Q8IUB5 93 aa9.9□□□□□ -0.82
EXOSC4-202ENST00000525936 NDUFS5O43920 106 aa9.88□□□□□ -0.83
EXOSC4-202ENST00000525936 CXCL6P80162 114 aa9.88□□□□□ -0.83
EXOSC4-202ENST00000525936 LCE2DQ5TA82 110 aaPredicted RBP9.87□□□□□ -0.83
EXOSC4-202ENST00000525936 Q5W150 140 aa9.86□□□□□ -0.83
EXOSC4-202ENST00000525936 FAM236DA0A1B0GTK5 79 aa9.85□□□□□ -0.83
EXOSC4-202ENST00000525936 HCG22E2RYF7 251 aa9.85□□□□□ -0.83
EXOSC4-202ENST00000525936 ACYP1P07311 99 aa9.85□□□□□ -0.83
EXOSC4-202ENST00000525936 FAM236CP0DP71 79 aa9.85□□□□□ -0.83
EXOSC4-202ENST00000525936 A0A1B0GV90 55 aa9.84□□□□□ -0.83
EXOSC4-202ENST00000525936 FAM240AA0A1B0GVK7 77 aa9.83□□□□□ -0.84
EXOSC4-202ENST00000525936 KRTAP9-8Q9BYQ0 159 aa9.74□□□□□ -0.85
EXOSC4-202ENST00000525936 IGKV2D-30A0A075B6S6 120 aa9.71□□□□□ -0.86
EXOSC4-202ENST00000525936 IGKV2-30P06310 120 aa9.71□□□□□ -0.86
EXOSC4-202ENST00000525936 C7orf65Q6ZTY9 151 aa9.71□□□□□ -0.86
EXOSC4-202ENST00000525936 ATP5EP2Q5VTU8 51 aa9.69□□□□□ -0.86
EXOSC4-202ENST00000525936 TP53AIP1Q9HCN2 124 aa9.68□□□□□ -0.86
EXOSC4-202ENST00000525936 LINC00643Q86TS7 51 aa9.62□□□□□ -0.87
EXOSC4-202ENST00000525936 FSIP2Q5CZC0 6907 aa9.6□□□□□ -0.87
EXOSC4-202ENST00000525936 H1FX-AS1Q4G0G2 97 aa9.6□□□□□ -0.87
EXOSC4-202ENST00000525936 MT2AP02795 61 aa9.59□□□□□ -0.87
EXOSC4-202ENST00000525936 HIST1H4AP62805 103 aaKnown RBP9.56□□□□□ -0.88
EXOSC4-202ENST00000525936 C4orf26Q17RF5 130 aa9.55□□□□□ -0.88
EXOSC4-202ENST00000525936 KRTAP9-6A0A140TA67 174 aa9.54□□□□□ -0.88
EXOSC4-202ENST00000525936 MT1FP04733 61 aa9.51□□□□□ -0.89
EXOSC4-202ENST00000525936 A0A087WVE0 104 aa9.49□□□□□ -0.89
EXOSC4-202ENST00000525936 J3QR89 54 aa9.49□□□□□ -0.89
EXOSC4-202ENST00000525936 KRTAP3-1Q9BYR8 98 aa9.49□□□□□ -0.89
EXOSC4-202ENST00000525936 TRAV22A0A0B4J277 110 aa9.47□□□□□ -0.89
EXOSC4-202ENST00000525936 CRCT1Q9UGL9 99 aa9.47□□□□□ -0.89
EXOSC4-202ENST00000525936 CYP4F30PQ9H0H9 118 aa9.46□□□□□ -0.9
EXOSC4-202ENST00000525936 UQCRQO14949 82 aa9.44□□□□□ -0.9
EXOSC4-202ENST00000525936 KRTAP10-10P60014 251 aa9.43□□□□□ -0.9
EXOSC4-202ENST00000525936 KRTAP9-3Q9BYQ3 159 aa9.42□□□□□ -0.9
EXOSC4-202ENST00000525936 LOC101927531A0A1B0GV80 90 aa9.4□□□□□ -0.9
EXOSC4-202ENST00000525936 C1orf64Q8NEQ6 169 aa9.4□□□□□ -0.9
EXOSC4-202ENST00000525936 USH2AO75445 5202 aa9.4□□□□□ -0.91
EXOSC4-202ENST00000525936 H0Y9P7 68 aa9.35□□□□□ -0.91
EXOSC4-202ENST00000525936 ATOX1O00244 68 aa9.35□□□□□ -0.91
EXOSC4-202ENST00000525936 OCR1Q9BZK8 76 aa9.35□□□□□ -0.91
EXOSC4-202ENST00000525936 LCE2BO14633 110 aa9.31□□□□□ -0.92
EXOSC4-202ENST00000525936 S4R3F8 94 aa9.28□□□□□ -0.92
EXOSC4-202ENST00000525936 K7ERU9 68 aa9.26□□□□□ -0.93
EXOSC4-202ENST00000525936 LCA10Q71F78 164 aa9.26□□□□□ -0.93
EXOSC4-202ENST00000525936 C5orf47Q569G3 176 aa9.24□□□□□ -0.93
EXOSC4-202ENST00000525936 SSPOA2VEC9 5147 aa9.24□□□□□ -0.93
EXOSC4-202ENST00000525936 LINC00208Q96KT6 92 aa9.23□□□□□ -0.93
EXOSC4-202ENST00000525936 IMUPQ9GZP8 106 aa9.23□□□□□ -0.93
EXOSC4-202ENST00000525936 CSAG1Q6PB30 78 aa9.21□□□□□ -0.94
EXOSC4-202ENST00000525936 KRTAP3-3Q9BYR6 98 aa9.21□□□□□ -0.94
EXOSC4-202ENST00000525936 MP68P56378 58 aa9.2□□□□□ -0.94
EXOSC4-202ENST00000525936 MT-ATP8P03928 68 aa9.18□□□□□ -0.94
EXOSC4-202ENST00000525936 KLKP1Q107X0 134 aa9.18□□□□□ -0.94
EXOSC4-202ENST00000525936 SCGB1A1P11684 91 aa9.15□□□□□ -0.94
EXOSC4-202ENST00000525936 H3BPC8 53 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms