RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 ZNF73O43830 326 aaPredicted RBP2.69□□□□□ -1.98
NEDD8-203ENST00000524927 H2BFSP57053 126 aa2.69□□□□□ -1.98
NEDD8-203ENST00000524927 IFITM2Q01629 132 aa2.69□□□□□ -1.98
NEDD8-203ENST00000524927 ZNF345Q14585 488 aa2.69□□□□□ -1.98
NEDD8-203ENST00000524927 SPINK8P0C7L1 97 aa2.68□□□□□ -1.98
NEDD8-203ENST00000524927 SPANXDQ9BXN6 97 aa2.68□□□□□ -1.98
NEDD8-203ENST00000524927 IGIPA6NJ69 53 aa2.67□□□□□ -1.98
NEDD8-203ENST00000524927 SPINK7P58062 85 aa2.67□□□□□ -1.98
NEDD8-203ENST00000524927 PMAIP1Q13794 54 aa2.67□□□□□ -1.98
NEDD8-203ENST00000524927 H1FX-AS1Q4G0G2 97 aa2.67□□□□□ -1.98
NEDD8-203ENST00000524927 MRPL51Q4U2R6 128 aaKnown RBP2.67□□□□□ -1.98
NEDD8-203ENST00000524927 COL5A1-AS1Q5SY13 56 aa2.67□□□□□ -1.98
NEDD8-203ENST00000524927 SFTA2Q6UW10 78 aa2.67□□□□□ -1.98
NEDD8-203ENST00000524927 CYSLTR1Q9Y271 337 aa2.67□□□□□ -1.98
NEDD8-203ENST00000524927 LAMTOR2Q9Y2Q5 125 aa2.67□□□□□ -1.98
NEDD8-203ENST00000524927 HMSDA8MTL9 139 aa2.66□□□□□ -1.98
NEDD8-203ENST00000524927 CKS2P33552 79 aa2.66□□□□□ -1.98
NEDD8-203ENST00000524927 LINC00158P58513 81 aa2.66□□□□□ -1.98
NEDD8-203ENST00000524927 KRTAP20-2Q3LI61 65 aa2.66□□□□□ -1.98
NEDD8-203ENST00000524927 LINC00299Q6ZSB3 139 aa2.66□□□□□ -1.98
NEDD8-203ENST00000524927 GTF2H5Q6ZYL4 71 aa2.66□□□□□ -1.98
NEDD8-203ENST00000524927 TCTE3Q8IZS6 198 aa2.66□□□□□ -1.98
NEDD8-203ENST00000524927 NAT8BQ9UHF3 227 aa2.66□□□□□ -1.98
NEDD8-203ENST00000524927 TEX49A0A1B0GTD5 131 aa2.65□□□□□ -1.99
NEDD8-203ENST00000524927 Q5BKY6 102 aa2.65□□□□□ -1.99
NEDD8-203ENST00000524927 RPL7L1Q6DKI1 246 aaKnown RBP2.65□□□□□ -1.99
NEDD8-203ENST00000524927 WFDC13Q8IUB5 93 aa2.65□□□□□ -1.99
NEDD8-203ENST00000524927 KCNRGQ8N5I3 272 aa2.65□□□□□ -1.99
NEDD8-203ENST00000524927 CST9LQ9H4G1 147 aa2.65□□□□□ -1.99
NEDD8-203ENST00000524927 TRBV10-2A0A0K0K1G8 114 aa2.64□□□□□ -1.99
NEDD8-203ENST00000524927 H3BRM9 83 aa2.64□□□□□ -1.99
NEDD8-203ENST00000524927 ATP5L2Q7Z4Y8 100 aa2.64□□□□□ -1.99
NEDD8-203ENST00000524927 CYSTM1Q9H1C7 97 aa2.64□□□□□ -1.99
NEDD8-203ENST00000524927 TRAV23DV6A0A075B6W5 121 aa2.63□□□□□ -1.99
NEDD8-203ENST00000524927 TRBV7-7A0A0K0K1E9 115 aa2.63□□□□□ -1.99
NEDD8-203ENST00000524927 HIGD1CA8MV81 97 aa2.63□□□□□ -1.99
NEDD8-203ENST00000524927 LST1O00453 97 aa2.63□□□□□ -1.99
NEDD8-203ENST00000524927 HINT1P49773 126 aaPredicted RBP2.63□□□□□ -1.99
NEDD8-203ENST00000524927 LYRM7Q5U5X0 104 aa2.63□□□□□ -1.99
NEDD8-203ENST00000524927 ANKRD29Q8N6D5 301 aa2.63□□□□□ -1.99
NEDD8-203ENST00000524927 NAT8Q9UHE5 227 aa2.63□□□□□ -1.99
NEDD8-203ENST00000524927 C9JAW5 83 aa2.62□□□□□ -1.99
NEDD8-203ENST00000524927 DPM2O94777 84 aa2.62□□□□□ -1.99
NEDD8-203ENST00000524927 NPYP01303 97 aa2.62□□□□□ -1.99
NEDD8-203ENST00000524927 FABP9Q0Z7S8 132 aa2.62□□□□□ -1.99
NEDD8-203ENST00000524927 KLKP1Q107X0 134 aa2.62□□□□□ -1.99
NEDD8-203ENST00000524927 KRTAP19-3Q7Z4W3 81 aa2.62□□□□□ -1.99
NEDD8-203ENST00000524927 DEFB105AQ8NG35 78 aa2.62□□□□□ -1.99
NEDD8-203ENST00000524927 FAM213BQ8TBF2 198 aa2.62□□□□□ -1.99
NEDD8-203ENST00000524927 LINC00313P59037 77 aa2.61□□□□□ -1.99
NEDD8-203ENST00000524927 SOSTDC1Q6X4U4 206 aa2.6□□□□□ -1.99
NEDD8-203ENST00000524927 MANBALQ9NQG1 85 aa2.6□□□□□ -1.99
NEDD8-203ENST00000524927 GNG13Q9P2W3 67 aa2.6□□□□□ -1.99
NEDD8-203ENST00000524927 CLLU1Q5K131 121 aa2.59□□□□□ -1.99
NEDD8-203ENST00000524927 S100A7L2Q5SY68 101 aa2.59□□□□□ -1.99
NEDD8-203ENST00000524927 S100ZQ8WXG8 99 aa2.59□□□□□ -1.99
NEDD8-203ENST00000524927 SNHG12Q9BXW3 62 aa2.59□□□□□ -1.99
NEDD8-203ENST00000524927 TSPEAR-AS2P59090 65 aa2.58□□□□□ -2
NEDD8-203ENST00000524927 COPS9Q8WXC6 57 aa2.58□□□□□ -2
NEDD8-203ENST00000524927 CRIPTQ9P021 101 aa2.58□□□□□ -2
NEDD8-203ENST00000524927 IGLV5-48A0A075B6I7 105 aa2.57□□□□□ -2
NEDD8-203ENST00000524927 ZNF815PA8K554 130 aa2.57□□□□□ -2
NEDD8-203ENST00000524927 SMIM13P0DJ93 91 aa2.57□□□□□ -2
NEDD8-203ENST00000524927 HSD52Q0P140 79 aa2.57□□□□□ -2
NEDD8-203ENST00000524927 PRR15Q8IV56 129 aa2.57□□□□□ -2
NEDD8-203ENST00000524927 K7EMI3 77 aa2.56□□□□□ -2
NEDD8-203ENST00000524927 SVBPQ8N300 66 aa2.56□□□□□ -2
NEDD8-203ENST00000524927 MIEN1Q9BRT3 115 aa2.55□□□□□ -2
NEDD8-203ENST00000524927 PYY3Q5JQD4 70 aa2.54□□□□□ -2
NEDD8-203ENST00000524927 MEIG1Q5JSS6 88 aa2.54□□□□□ -2
NEDD8-203ENST00000524927 Q6JHZ5 121 aa2.54□□□□□ -2
NEDD8-203ENST00000524927 Q8N8P6 123 aa2.54□□□□□ -2
NEDD8-203ENST00000524927 CLEC2BQ92478 149 aa2.54□□□□□ -2
NEDD8-203ENST00000524927 RAB37Q96AX2 223 aa2.54□□□□□ -2
NEDD8-203ENST00000524927 NXT2Q9NPJ8 142 aaKnown RBP2.54□□□□□ -2
NEDD8-203ENST00000524927 UMAD1C9J7I0 102 aa2.53□□□□□ -2
NEDD8-203ENST00000524927 MT-ND4LP03901 98 aa2.53□□□□□ -2
NEDD8-203ENST00000524927 KRTAP12-3P60328 96 aa2.53□□□□□ -2
NEDD8-203ENST00000524927 PEA15Q15121 130 aa2.53□□□□□ -2
NEDD8-203ENST00000524927 LCA10Q71F78 164 aa2.53□□□□□ -2
NEDD8-203ENST00000524927 VAMP8Q9BV40 100 aa2.53□□□□□ -2
NEDD8-203ENST00000524927 IFITM1P13164 125 aa2.52□□□□□ -2.01
NEDD8-203ENST00000524927 TOMM6Q96B49 74 aa2.52□□□□□ -2.01
NEDD8-203ENST00000524927 PRELID3AQ96N28 172 aa2.52□□□□□ -2.01
NEDD8-203ENST00000524927 F8WEM9 126 aa2.51□□□□□ -2.01
NEDD8-203ENST00000524927 J3QQQ9 107 aa2.51□□□□□ -2.01
NEDD8-203ENST00000524927 APOC3P02656 99 aa2.51□□□□□ -2.01
NEDD8-203ENST00000524927 TRGC2P03986 189 aa2.51□□□□□ -2.01
NEDD8-203ENST00000524927 IGLC3P0DOY3 106 aa2.51□□□□□ -2.01
NEDD8-203ENST00000524927 ELOF1P60002 83 aaKnown RBP2.51□□□□□ -2.01
NEDD8-203ENST00000524927 TMEM258P61165 79 aa2.51□□□□□ -2.01
NEDD8-203ENST00000524927 ATOH7Q8N100 152 aa2.51□□□□□ -2.01
NEDD8-203ENST00000524927 SMCO4Q9NRQ5 59 aa2.51□□□□□ -2.01
NEDD8-203ENST00000524927 TRBV7-6A0A0J9YX20 115 aa2.5□□□□□ -2.01
NEDD8-203ENST00000524927 H3BPC8 53 aa2.5□□□□□ -2.01
NEDD8-203ENST00000524927 FABP2P12104 132 aa2.5□□□□□ -2.01
NEDD8-203ENST00000524927 MRPL54Q6P161 138 aaKnown RBP2.5□□□□□ -2.01
NEDD8-203ENST00000524927 C2orf91Q6ZV80 131 aa2.5□□□□□ -2.01
NEDD8-203ENST00000524927 KTN1-AS1Q86SY8 53 aa2.5□□□□□ -2.01
NEDD8-203ENST00000524927 SCGB3A1Q96QR1 104 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms