RNA–Protein interactions for RNA: ENST00000523541.1

CCNC-213, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-213ENST00000523541 LYRM7Q5U5X0 104 aa8.92□□□□□ -0.98
CCNC-213ENST00000523541 KRTAP16-1A8MUX0 517 aa8.91□□□□□ -0.98
CCNC-213ENST00000523541 TSTD3H0UI37 97 aa8.91□□□□□ -0.98
CCNC-213ENST00000523541 DEFB116Q30KQ4 102 aa8.91□□□□□ -0.98
CCNC-213ENST00000523541 TRBV20-1A0A075B6N2 111 aa8.9□□□□□ -0.98
CCNC-213ENST00000523541 C8orf87E5RJ46 101 aa8.9□□□□□ -0.98
CCNC-213ENST00000523541 LORP23490 312 aaPredicted RBP8.89□□□□□ -0.99
CCNC-213ENST00000523541 Q6ZQT0 140 aa8.89□□□□□ -0.99
CCNC-213ENST00000523541 IGHV6-1A0A0B4J1U7 121 aa8.88□□□□□ -0.99
CCNC-213ENST00000523541 LOC110117498A0A087WWA1 95 aa8.87□□□□□ -0.99
CCNC-213ENST00000523541 A0A1B0GVX0 72 aa8.87□□□□□ -0.99
CCNC-213ENST00000523541 NOTCH2NLQ7Z3S9 236 aa8.85□□□□□ -0.99
CCNC-213ENST00000523541 NAA38Q9BRA0 125 aaKnown RBP8.84□□□□□ -0.99
CCNC-213ENST00000523541 NDUFB1O75438 58 aa8.83□□□□□ -1
CCNC-213ENST00000523541 CRCT1Q9UGL9 99 aa8.83□□□□□ -1
CCNC-213ENST00000523541 FSIP2Q5CZC0 6907 aa8.82□□□□□ -1
CCNC-213ENST00000523541 FAM236DA0A1B0GTK5 79 aa8.79□□□□□ -1
CCNC-213ENST00000523541 FAM236CP0DP71 79 aa8.79□□□□□ -1
CCNC-213ENST00000523541 BATFQ16520 125 aa8.77□□□□□ -1.01
CCNC-213ENST00000523541 LOC105371267A0A1B0GV96 52 aa8.76□□□□□ -1.01
CCNC-213ENST00000523541 C9orf118A6NHY6 69 aa8.76□□□□□ -1.01
CCNC-213ENST00000523541 A8MWP4 228 aa8.76□□□□□ -1.01
CCNC-213ENST00000523541 C14orf132Q9NPU4 83 aa8.75□□□□□ -1.01
CCNC-213ENST00000523541 H3BT86 120 aa8.74□□□□□ -1.01
CCNC-213ENST00000523541 Q8N9P0 234 aaPredicted RBP8.74□□□□□ -1.01
CCNC-213ENST00000523541 RBM12B-AS1Q9P1G2 102 aa8.74□□□□□ -1.01
CCNC-213ENST00000523541 NREPQ16612 68 aa8.73□□□□□ -1.01
CCNC-213ENST00000523541 MPLKIPQ8TAP9 179 aa8.72□□□□□ -1.01
CCNC-213ENST00000523541 ZCCHC13Q8WW36 166 aaKnown RBP8.72□□□□□ -1.01
CCNC-213ENST00000523541 A0A1W2PPM0 123 aa8.71□□□□□ -1.02
CCNC-213ENST00000523541 TAX1BP3O14907 124 aa8.7□□□□□ -1.02
CCNC-213ENST00000523541 HRES1P13985 223 aa8.7□□□□□ -1.02
CCNC-213ENST00000523541 C8orf17Q9NRJ1 99 aa8.7□□□□□ -1.02
CCNC-213ENST00000523541 IGKV3D-7A0A0C4DH55 119 aa8.68□□□□□ -1.02
CCNC-213ENST00000523541 PRR15Q8IV56 129 aa8.68□□□□□ -1.02
CCNC-213ENST00000523541 MTURNQ8N3F0 131 aa8.67□□□□□ -1.02
CCNC-213ENST00000523541 Q6ZVQ6 151 aa8.64□□□□□ -1.03
CCNC-213ENST00000523541 SPINK7P58062 85 aa8.63□□□□□ -1.03
CCNC-213ENST00000523541 TMEM254Q8TBM7 123 aa8.6□□□□□ -1.03
CCNC-213ENST00000523541 KRTAP9-8Q9BYQ0 159 aa8.6□□□□□ -1.03
CCNC-213ENST00000523541 MRPL34Q9BQ48 92 aaKnown RBP8.58□□□□□ -1.04
CCNC-213ENST00000523541 SPCS1Q9Y6A9 102 aa8.57□□□□□ -1.04
CCNC-213ENST00000523541 MMP24-AS1A0A0U1RRL7 71 aa8.55□□□□□ -1.04
CCNC-213ENST00000523541 BPY2O14599 106 aa8.55□□□□□ -1.04
CCNC-213ENST00000523541 COL5A1-AS1Q5SY13 56 aa8.55□□□□□ -1.04
CCNC-213ENST00000523541 hDV103S1A0JD37 113 aa8.54□□□□□ -1.04
CCNC-213ENST00000523541 SMCPP49901 116 aaPredicted RBP8.54□□□□□ -1.04
CCNC-213ENST00000523541 K7EQZ3 153 aa8.53□□□□□ -1.04
CCNC-213ENST00000523541 WFDC13Q8IUB5 93 aa8.49□□□□□ -1.05
CCNC-213ENST00000523541 NDUFS5O43920 106 aa8.46□□□□□ -1.06
CCNC-213ENST00000523541 MT2AP02795 61 aa8.46□□□□□ -1.06
CCNC-213ENST00000523541 K7EP34 96 aa8.44□□□□□ -1.06
CCNC-213ENST00000523541 KRTAP10-10P60014 251 aa8.44□□□□□ -1.06
CCNC-213ENST00000523541 PRO0461Q9UI25 63 aa8.44□□□□□ -1.06
CCNC-213ENST00000523541 UBL5Q9BZL1 73 aa8.43□□□□□ -1.06
CCNC-213ENST00000523541 CASC2Q6XLA1 102 aa8.41□□□□□ -1.06
CCNC-213ENST00000523541 MT1FP04733 61 aa8.39□□□□□ -1.07
CCNC-213ENST00000523541 GTF2H5Q6ZYL4 71 aa8.39□□□□□ -1.07
CCNC-213ENST00000523541 LINC00846Q9NV44 126 aa8.38□□□□□ -1.07
CCNC-213ENST00000523541 CXCL6P80162 114 aa8.37□□□□□ -1.07
CCNC-213ENST00000523541 F8W1H4 67 aa8.36□□□□□ -1.07
CCNC-213ENST00000523541 C7orf65Q6ZTY9 151 aa8.36□□□□□ -1.07
CCNC-213ENST00000523541 Q8N9L7 120 aa8.36□□□□□ -1.07
CCNC-213ENST00000523541 USH2AO75445 5202 aa8.35□□□□□ -1.07
CCNC-213ENST00000523541 H1FX-AS1Q4G0G2 97 aa8.35□□□□□ -1.07
CCNC-213ENST00000523541 HCG22E2RYF7 251 aa8.34□□□□□ -1.07
CCNC-213ENST00000523541 Q5W150 140 aa8.34□□□□□ -1.07
CCNC-213ENST00000523541 KRTAP9-3Q9BYQ3 159 aa8.33□□□□□ -1.08
CCNC-213ENST00000523541 IGKV2D-30A0A075B6S6 120 aa8.31□□□□□ -1.08
CCNC-213ENST00000523541 IGKV2-30P06310 120 aa8.31□□□□□ -1.08
CCNC-213ENST00000523541 SSPOA2VEC9 5147 aa8.28□□□□□ -1.08
CCNC-213ENST00000523541 PCP4L1A6NKN8 68 aa8.27□□□□□ -1.09
CCNC-213ENST00000523541 ETDBQ3ZM63 59 aa8.24□□□□□ -1.09
CCNC-213ENST00000523541 TP53AIP1Q9HCN2 124 aa8.24□□□□□ -1.09
CCNC-213ENST00000523541 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.2□□□□□ -1.1
CCNC-213ENST00000523541 KRTAP19-1Q8IUB9 90 aa8.19□□□□□ -1.1
CCNC-213ENST00000523541 ACYP1P07311 99 aa8.18□□□□□ -1.1
CCNC-213ENST00000523541 C4orf26Q17RF5 130 aa8.18□□□□□ -1.1
CCNC-213ENST00000523541 KRTAP9-7A8MTY7 169 aa8.14□□□□□ -1.11
CCNC-213ENST00000523541 KRTAP4-8Q9BYQ9 185 aa8.12□□□□□ -1.11
CCNC-213ENST00000523541 FCGBPQ9Y6R7 5405 aaPredicted RBP8.11□□□□□ -1.11
CCNC-213ENST00000523541 FAM240AA0A1B0GVK7 77 aa8.1□□□□□ -1.11
CCNC-213ENST00000523541 ATP5EP2Q5VTU8 51 aa8.07□□□□□ -1.12
CCNC-213ENST00000523541 C1orf64Q8NEQ6 169 aa8.07□□□□□ -1.12
CCNC-213ENST00000523541 KRTAP3-1Q9BYR8 98 aa8.06□□□□□ -1.12
CCNC-213ENST00000523541 KRTAP19-6Q3LI70 58 aa8.02□□□□□ -1.13
CCNC-213ENST00000523541 C5orf47Q569G3 176 aa8.02□□□□□ -1.13
CCNC-213ENST00000523541 CSAG1Q6PB30 78 aa8.02□□□□□ -1.13
CCNC-213ENST00000523541 S4R3F8 94 aa8.02□□□□□ -1.13
CCNC-213ENST00000523541 CYP4F30PQ9H0H9 118 aa8.01□□□□□ -1.13
CCNC-213ENST00000523541 FAM236AA0A1B0GUQ0 79 aa8□□□□□ -1.13
CCNC-213ENST00000523541 FAM236BA0A1B0GV22 79 aa8□□□□□ -1.13
CCNC-213ENST00000523541 TRAV22A0A0B4J277 110 aa7.99□□□□□ -1.13
CCNC-213ENST00000523541 LOC101927531A0A1B0GV80 90 aa7.99□□□□□ -1.13
CCNC-213ENST00000523541 UQCRQO14949 82 aa7.95□□□□□ -1.14
CCNC-213ENST00000523541 HIST1H4AP62805 103 aaKnown RBP7.95□□□□□ -1.14
CCNC-213ENST00000523541 LCA10Q71F78 164 aa7.95□□□□□ -1.14
CCNC-213ENST00000523541 ATOX1O00244 68 aa7.93□□□□□ -1.14
CCNC-213ENST00000523541 LINC00643Q86TS7 51 aa7.93□□□□□ -1.14
CCNC-213ENST00000523541 MACF1Q9UPN3 7388 aaKnown RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms