RNA–Protein interactions for RNA: ENST00000521179.5

TVP23C-206, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 5

Gene TVP23C, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-206ENST00000521179 PRR34Q9NV39 138 aa4.11□□□□□ -1.75
TVP23C-206ENST00000521179 FAT2Q9NYQ8 4349 aa4.1□□□□□ -1.75
TVP23C-206ENST00000521179 HCG22E2RYF7 251 aa4.1□□□□□ -1.75
TVP23C-206ENST00000521179 ANGP03950 147 aaKnown RBP4.1□□□□□ -1.75
TVP23C-206ENST00000521179 MP68P56378 58 aa4.1□□□□□ -1.75
TVP23C-206ENST00000521179 PRR3P79522 188 aaKnown RBP4.1□□□□□ -1.75
TVP23C-206ENST00000521179 LINC00269Q8N2A0 174 aa4.1□□□□□ -1.75
TVP23C-206ENST00000521179 C1orf64Q8NEQ6 169 aa4.1□□□□□ -1.75
TVP23C-206ENST00000521179 SPRR4Q96PI1 79 aa4.1□□□□□ -1.75
TVP23C-206ENST00000521179 Q9BRP9 147 aa4.1□□□□□ -1.75
TVP23C-206ENST00000521179 DNAH2Q9P225 4427 aa4.1□□□□□ -1.75
TVP23C-206ENST00000521179 RPL37AP8A6NKH3 93 aa4.09□□□□□ -1.75
TVP23C-206ENST00000521179 DNAH10OSP0CZ25 163 aa4.09□□□□□ -1.75
TVP23C-206ENST00000521179 HIGD2AQ9BW72 106 aa4.09□□□□□ -1.75
TVP23C-206ENST00000521179 KCNQ1DNQ9H478 68 aa4.09□□□□□ -1.75
TVP23C-206ENST00000521179 TRAV22A0A0B4J277 110 aa4.08□□□□□ -1.76
TVP23C-206ENST00000521179 PSCAO43653 123 aa4.08□□□□□ -1.76
TVP23C-206ENST00000521179 REG3GQ6UW15 175 aa4.08□□□□□ -1.76
TVP23C-206ENST00000521179 UNQ6190/PRO20217Q6UXQ8 127 aa4.08□□□□□ -1.76
TVP23C-206ENST00000521179 SCXQ7RTU7 201 aa4.08□□□□□ -1.76
TVP23C-206ENST00000521179 KTN1-AS1Q86SY8 53 aa4.08□□□□□ -1.76
TVP23C-206ENST00000521179 LINC01556Q5JQF7 62 aa4.07□□□□□ -1.76
TVP23C-206ENST00000521179 ATP11AUNQ6ZP68 121 aa4.07□□□□□ -1.76
TVP23C-206ENST00000521179 Q6ZRN7 208 aaPredicted RBP4.07□□□□□ -1.76
TVP23C-206ENST00000521179 Q8NDZ9 215 aa4.07□□□□□ -1.76
TVP23C-206ENST00000521179 PKD1P98161 4303 aa4.07□□□□□ -1.76
TVP23C-206ENST00000521179 C16orf90A8MZG2 172 aa4.06□□□□□ -1.76
TVP23C-206ENST00000521179 C9orf116Q5BN46 136 aaPredicted RBP4.06□□□□□ -1.76
TVP23C-206ENST00000521179 C6orf48Q9UBA6 75 aa4.06□□□□□ -1.76
TVP23C-206ENST00000521179 TLX1NBP0CAT3 122 aa4.05□□□□□ -1.76
TVP23C-206ENST00000521179 CLPSL2Q6UWE3 100 aa4.05□□□□□ -1.76
TVP23C-206ENST00000521179 PHF5AQ7RTV0 110 aaKnown RBP4.05□□□□□ -1.76
TVP23C-206ENST00000521179 CAMK2N2Q96S95 79 aa4.05□□□□□ -1.76
TVP23C-206ENST00000521179 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.04□□□□□ -1.76
TVP23C-206ENST00000521179 A0A087WTM6 91 aa4.04□□□□□ -1.76
TVP23C-206ENST00000521179 LOC101927531A0A1B0GV80 90 aa4.04□□□□□ -1.76
TVP23C-206ENST00000521179 SYCNQ0VAF6 134 aa4.04□□□□□ -1.76
TVP23C-206ENST00000521179 C1orf137Q5JT78 98 aa4.04□□□□□ -1.76
TVP23C-206ENST00000521179 KLK12Q9UKR0 248 aa4.04□□□□□ -1.76
TVP23C-206ENST00000521179 MYCBP2O75592 4640 aa4.03□□□□□ -1.76
TVP23C-206ENST00000521179 Q6ZRX8 168 aa4.03□□□□□ -1.76
TVP23C-206ENST00000521179 NKAPP1Q8N9T2 125 aa4.03□□□□□ -1.76
TVP23C-206ENST00000521179 TYMSOSQ8TAI1 123 aa4.03□□□□□ -1.76
TVP23C-206ENST00000521179 LINC00208Q96KT6 92 aa4.03□□□□□ -1.76
TVP23C-206ENST00000521179 APOBP04114 4563 aaKnown RBP4.02□□□□□ -1.77
TVP23C-206ENST00000521179 SRRM2Q9UQ35 2752 aaKnown RBP4.02□□□□□ -1.77
TVP23C-206ENST00000521179 IGLV10-54A0A075B6I4 117 aa4.02□□□□□ -1.77
TVP23C-206ENST00000521179 IGKV2D-24A0A075B6R9 120 aa4.02□□□□□ -1.77
TVP23C-206ENST00000521179 SPRR1AP35321 89 aa4.02□□□□□ -1.77
TVP23C-206ENST00000521179 Q5VV11 94 aa4.02□□□□□ -1.77
TVP23C-206ENST00000521179 HMCN2Q8NDA2 5059 aa4.01□□□□□ -1.77
TVP23C-206ENST00000521179 IGLV8-61A0A075B6I0 122 aa4.01□□□□□ -1.77
TVP23C-206ENST00000521179 A0A1W2PNM2 257 aa4.01□□□□□ -1.77
TVP23C-206ENST00000521179 LRCOL1A6NCL2 159 aa4.01□□□□□ -1.77
TVP23C-206ENST00000521179 ASB16-AS1Q495Z4 193 aa4.01□□□□□ -1.77
TVP23C-206ENST00000521179 Q8N9L7 120 aa4.01□□□□□ -1.77
TVP23C-206ENST00000521179 CDC42SE1Q9NRR8 79 aa4.01□□□□□ -1.77
TVP23C-206ENST00000521179 XAGE1AQ9HD64 81 aa4□□□□□ -1.77
TVP23C-206ENST00000521179 CHKB-CPT1BH3BT56 60 aa3.99□□□□□ -1.77
TVP23C-206ENST00000521179 PSPHP1O15172 72 aa3.99□□□□□ -1.77
TVP23C-206ENST00000521179 RNF213Q63HN8 5207 aa3.99□□□□□ -1.77
TVP23C-206ENST00000521179 A8MUN3 132 aa3.98□□□□□ -1.77
TVP23C-206ENST00000521179 KRTAP4-16G5E9R7 235 aaPredicted RBP3.98□□□□□ -1.77
TVP23C-206ENST00000521179 K7EQZ3 153 aa3.98□□□□□ -1.77
TVP23C-206ENST00000521179 KRTAP1-4P0C5Y4 121 aa3.98□□□□□ -1.77
TVP23C-206ENST00000521179 KRTAP10-1P60331 282 aa3.98□□□□□ -1.77
TVP23C-206ENST00000521179 C7orf65Q6ZTY9 151 aa3.98□□□□□ -1.77
TVP23C-206ENST00000521179 TP53AIP1Q9HCN2 124 aa3.98□□□□□ -1.77
TVP23C-206ENST00000521179 LINC01558Q9Y6Z2 57 aa3.97□□□□□ -1.77
TVP23C-206ENST00000521179 IGLV1-50A0A075B6I6 118 aa3.96□□□□□ -1.78
TVP23C-206ENST00000521179 A6NN06 94 aa3.96□□□□□ -1.78
TVP23C-206ENST00000521179 H0Y9P7 68 aa3.96□□□□□ -1.78
TVP23C-206ENST00000521179 KRTAP26-1Q6PEX3 210 aa3.96□□□□□ -1.78
TVP23C-206ENST00000521179 C15orf56Q8N910 161 aa3.96□□□□□ -1.78
TVP23C-206ENST00000521179 C9orf163Q8N9P6 203 aa3.96□□□□□ -1.78
TVP23C-206ENST00000521179 C7orf33Q8WU49 177 aa3.96□□□□□ -1.78
TVP23C-206ENST00000521179 LRP1BQ9NZR2 4599 aa3.96□□□□□ -1.78
TVP23C-206ENST00000521179 DNAH5Q8TE73 4624 aa3.95□□□□□ -1.78
TVP23C-206ENST00000521179 A6NED7 52 aa3.95□□□□□ -1.78
TVP23C-206ENST00000521179 A8MU10 97 aa3.95□□□□□ -1.78
TVP23C-206ENST00000521179 ST20-AS1Q8NBB2 130 aa3.95□□□□□ -1.78
TVP23C-206ENST00000521179 PRR15LQ9BU68 103 aa3.95□□□□□ -1.78
TVP23C-206ENST00000521179 RBM12B-AS1Q9P1G2 102 aa3.95□□□□□ -1.78
TVP23C-206ENST00000521179 A8MWP4 228 aa3.94□□□□□ -1.78
TVP23C-206ENST00000521179 CASC2Q6XLA1 102 aa3.94□□□□□ -1.78
TVP23C-206ENST00000521179 LCA10Q71F78 164 aa3.94□□□□□ -1.78
TVP23C-206ENST00000521179 PLAC8Q9NZF1 115 aa3.94□□□□□ -1.78
TVP23C-206ENST00000521179 SMR3BP02814 79 aaPredicted RBP3.93□□□□□ -1.78
TVP23C-206ENST00000521179 CNBPP62633 177 aaKnown RBP3.93□□□□□ -1.78
TVP23C-206ENST00000521179 DEFB105AQ8NG35 78 aa3.93□□□□□ -1.78
TVP23C-206ENST00000521179 SPRR1BP22528 89 aa3.92□□□□□ -1.78
TVP23C-206ENST00000521179 MOBPQ13875 183 aa3.92□□□□□ -1.78
TVP23C-206ENST00000521179 COA5Q86WW8 74 aa3.92□□□□□ -1.78
TVP23C-206ENST00000521179 H0Y9J4 135 aa3.91□□□□□ -1.78
TVP23C-206ENST00000521179 RPL37AP61513 92 aaKnown RBP3.91□□□□□ -1.78
TVP23C-206ENST00000521179 IGFL1Q6UW32 110 aa3.91□□□□□ -1.78
TVP23C-206ENST00000521179 SPTSSBQ8NFR3 76 aa3.9□□□□□ -1.79
TVP23C-206ENST00000521179 FLG2Q5D862 2391 aaPredicted RBP3.89□□□□□ -1.79
TVP23C-206ENST00000521179 MUC2Q02817 5179 aa3.89□□□□□ -1.79
TVP23C-206ENST00000521179 FAM168BA1KXE4 195 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms