RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 TRAV1-2A0A0B4J238 106 aa1.84□□□□□ -2.11
HMGB1P23-201ENST00000518743 NDUFB6O95139 128 aa1.84□□□□□ -2.11
HMGB1P23-201ENST00000518743 ARMS2P0C7Q2 107 aa1.84□□□□□ -2.11
HMGB1P23-201ENST00000518743 C5orf38Q86SI9 138 aa1.84□□□□□ -2.11
HMGB1P23-201ENST00000518743 TOMM5Q8N4H5 51 aa1.84□□□□□ -2.11
HMGB1P23-201ENST00000518743 SMIM4Q8WVI0 70 aa1.84□□□□□ -2.11
HMGB1P23-201ENST00000518743 SPRR4Q96PI1 79 aa1.84□□□□□ -2.11
HMGB1P23-201ENST00000518743 C6orf48Q9UBA6 75 aa1.84□□□□□ -2.11
HMGB1P23-201ENST00000518743 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.83□□□□□ -2.12
HMGB1P23-201ENST00000518743 LOC110117498A0A087WWA1 95 aa1.83□□□□□ -2.12
HMGB1P23-201ENST00000518743 INE1O15225 51 aa1.83□□□□□ -2.12
HMGB1P23-201ENST00000518743 SIX6O95475 246 aa1.83□□□□□ -2.12
HMGB1P23-201ENST00000518743 TRACP01848 142 aa1.83□□□□□ -2.12
HMGB1P23-201ENST00000518743 COX7CP15954 63 aa1.83□□□□□ -2.12
HMGB1P23-201ENST00000518743 RBM3P98179 157 aaKnown RBP1.83□□□□□ -2.12
HMGB1P23-201ENST00000518743 SSBP1Q04837 148 aaKnown RBP1.83□□□□□ -2.12
HMGB1P23-201ENST00000518743 COL5A1-AS1Q5SY13 56 aa1.83□□□□□ -2.12
HMGB1P23-201ENST00000518743 LIMD2Q9BT23 127 aa1.83□□□□□ -2.12
HMGB1P23-201ENST00000518743 HSPB8Q9UJY1 196 aa1.83□□□□□ -2.12
HMGB1P23-201ENST00000518743 MGPP08493 103 aa1.82□□□□□ -2.12
HMGB1P23-201ENST00000518743 C9orf153Q5TBE3 101 aa1.82□□□□□ -2.12
HMGB1P23-201ENST00000518743 MIC13Q5XKP0 118 aa1.82□□□□□ -2.12
HMGB1P23-201ENST00000518743 Q86TA4 180 aa1.82□□□□□ -2.12
HMGB1P23-201ENST00000518743 PRO1933Q9H354 126 aa1.82□□□□□ -2.12
HMGB1P23-201ENST00000518743 KANTRA0A1W2PQU2 76 aa1.81□□□□□ -2.12
HMGB1P23-201ENST00000518743 F8W1H4 67 aa1.81□□□□□ -2.12
HMGB1P23-201ENST00000518743 H3BRM9 83 aa1.81□□□□□ -2.12
HMGB1P23-201ENST00000518743 K7ERU9 68 aa1.81□□□□□ -2.12
HMGB1P23-201ENST00000518743 UQCRQO14949 82 aa1.81□□□□□ -2.12
HMGB1P23-201ENST00000518743 MT1BP07438 61 aa1.81□□□□□ -2.12
HMGB1P23-201ENST00000518743 OCIAD2Q56VL3 154 aa1.81□□□□□ -2.12
HMGB1P23-201ENST00000518743 MGST2Q99735 147 aa1.81□□□□□ -2.12
HMGB1P23-201ENST00000518743 GSKIPQ9P0R6 139 aa1.81□□□□□ -2.12
HMGB1P23-201ENST00000518743 UBE2L3P68036 154 aaKnown RBP1.8□□□□□ -2.12
HMGB1P23-201ENST00000518743 TMEM14EPQ6UXP3 125 aa1.8□□□□□ -2.12
HMGB1P23-201ENST00000518743 SSBP3-AS1Q7Z2R9 100 aa1.8□□□□□ -2.12
HMGB1P23-201ENST00000518743 BRK1Q8WUW1 75 aa1.8□□□□□ -2.12
HMGB1P23-201ENST00000518743 S100A16Q96FQ6 103 aaKnown RBP1.8□□□□□ -2.12
HMGB1P23-201ENST00000518743 AP1S3Q96PC3 154 aa1.8□□□□□ -2.12
HMGB1P23-201ENST00000518743 CDC42SE1Q9NRR8 79 aa1.8□□□□□ -2.12
HMGB1P23-201ENST00000518743 PSENENQ9NZ42 101 aa1.8□□□□□ -2.12
HMGB1P23-201ENST00000518743 TRBV30A0A0K0K1B3 111 aa1.79□□□□□ -2.12
HMGB1P23-201ENST00000518743 ZNF727A8MUV8 499 aa1.79□□□□□ -2.12
HMGB1P23-201ENST00000518743 C9JAW5 83 aa1.79□□□□□ -2.12
HMGB1P23-201ENST00000518743 FAUP35544 74 aaKnown RBP1.79□□□□□ -2.12
HMGB1P23-201ENST00000518743 PPP1R1CQ8WVI7 109 aa1.79□□□□□ -2.12
HMGB1P23-201ENST00000518743 HBDP02042 147 aa1.78□□□□□ -2.12
HMGB1P23-201ENST00000518743 AKAIN1P0CW23 69 aa1.78□□□□□ -2.12
HMGB1P23-201ENST00000518743 IGLC3P0DOY3 106 aa1.78□□□□□ -2.12
HMGB1P23-201ENST00000518743 FOXA3P55318 350 aaPredicted RBP1.78□□□□□ -2.12
HMGB1P23-201ENST00000518743 SPANXN1Q5VSR9 72 aa1.78□□□□□ -2.12
HMGB1P23-201ENST00000518743 VPS25Q9BRG1 176 aa1.78□□□□□ -2.12
HMGB1P23-201ENST00000518743 UQCR10Q9UDW1 63 aa1.78□□□□□ -2.12
HMGB1P23-201ENST00000518743 ARL2-SNX15V9GYD0 113 aa1.78□□□□□ -2.12
HMGB1P23-201ENST00000518743 UMAD1C9J7I0 102 aa1.77□□□□□ -2.13
HMGB1P23-201ENST00000518743 SSSCA1O60232 199 aa1.77□□□□□ -2.13
HMGB1P23-201ENST00000518743 CASC2Q6XLA1 102 aa1.77□□□□□ -2.13
HMGB1P23-201ENST00000518743 CLEC2BQ92478 149 aa1.77□□□□□ -2.13
HMGB1P23-201ENST00000518743 LOC107984156A0A0G2JMH3 177 aa1.76□□□□□ -2.13
HMGB1P23-201ENST00000518743 M0QY20 66 aa1.76□□□□□ -2.13
HMGB1P23-201ENST00000518743 SFT2D2O95562 160 aa1.76□□□□□ -2.13
HMGB1P23-201ENST00000518743 CD3DP04234 171 aa1.76□□□□□ -2.13
HMGB1P23-201ENST00000518743 KRTAP12-4P60329 112 aa1.76□□□□□ -2.13
HMGB1P23-201ENST00000518743 CKS1BP61024 79 aa1.76□□□□□ -2.13
HMGB1P23-201ENST00000518743 RPL7L1Q6DKI1 246 aaKnown RBP1.76□□□□□ -2.13
HMGB1P23-201ENST00000518743 ARL17AQ8IVW1 177 aa1.76□□□□□ -2.13
HMGB1P23-201ENST00000518743 FAM167A-AS1Q96KT0 104 aa1.76□□□□□ -2.13
HMGB1P23-201ENST00000518743 UBE2L5PA0A1B0GUS4 154 aa1.75□□□□□ -2.13
HMGB1P23-201ENST00000518743 PMCHL1Q16048 86 aa1.75□□□□□ -2.13
HMGB1P23-201ENST00000518743 J3QR89 54 aa1.74□□□□□ -2.13
HMGB1P23-201ENST00000518743 HSD52Q0P140 79 aa1.74□□□□□ -2.13
HMGB1P23-201ENST00000518743 MIR22HGQ0VDD5 57 aa1.74□□□□□ -2.13
HMGB1P23-201ENST00000518743 Q5XG85 94 aa1.74□□□□□ -2.13
HMGB1P23-201ENST00000518743 MRPL54Q6P161 138 aaKnown RBP1.74□□□□□ -2.13
HMGB1P23-201ENST00000518743 C5orf17Q8NAS9 161 aa1.74□□□□□ -2.13
HMGB1P23-201ENST00000518743 C18orf32Q8TCD1 76 aa1.74□□□□□ -2.13
HMGB1P23-201ENST00000518743 OBSCN-AS1Q96MR7 158 aa1.74□□□□□ -2.13
HMGB1P23-201ENST00000518743 PSMG3Q9BT73 122 aaPredicted RBP1.74□□□□□ -2.13
HMGB1P23-201ENST00000518743 CDC42SE2Q9NRR3 84 aa1.74□□□□□ -2.13
HMGB1P23-201ENST00000518743 PIGBOS1A0A0B4J2F0 54 aa1.73□□□□□ -2.13
HMGB1P23-201ENST00000518743 NCR2O95944 276 aa1.73□□□□□ -2.13
HMGB1P23-201ENST00000518743 SLC25A6P12236 298 aa1.73□□□□□ -2.13
HMGB1P23-201ENST00000518743 CKS2P33552 79 aa1.73□□□□□ -2.13
HMGB1P23-201ENST00000518743 SEC11AP67812 179 aa1.73□□□□□ -2.13
HMGB1P23-201ENST00000518743 SERF2P84101 59 aa1.73□□□□□ -2.13
HMGB1P23-201ENST00000518743 BVES-AS1Q5T3Y7 98 aa1.73□□□□□ -2.13
HMGB1P23-201ENST00000518743 GTF2H5Q6ZYL4 71 aa1.73□□□□□ -2.13
HMGB1P23-201ENST00000518743 SMIM7Q9BQ49 75 aa1.73□□□□□ -2.13
HMGB1P23-201ENST00000518743 PMCHL2Q9BQD1 86 aa1.73□□□□□ -2.13
HMGB1P23-201ENST00000518743 VAMP8Q9BV40 100 aa1.73□□□□□ -2.13
HMGB1P23-201ENST00000518743 ST20Q9HBF5 79 aa1.73□□□□□ -2.13
HMGB1P23-201ENST00000518743 MANBALQ9NQG1 85 aa1.73□□□□□ -2.13
HMGB1P23-201ENST00000518743 ERG28Q9UKR5 140 aa1.73□□□□□ -2.13
HMGB1P23-201ENST00000518743 FAM236AA0A1B0GUQ0 79 aa1.72□□□□□ -2.13
HMGB1P23-201ENST00000518743 FAM236BA0A1B0GV22 79 aa1.72□□□□□ -2.13
HMGB1P23-201ENST00000518743 DNAL4O96015 105 aa1.72□□□□□ -2.13
HMGB1P23-201ENST00000518743 GNG4P50150 75 aa1.72□□□□□ -2.13
HMGB1P23-201ENST00000518743 SPATA45Q537H7 98 aa1.72□□□□□ -2.13
HMGB1P23-201ENST00000518743 SPANXDQ9BXN6 97 aa1.72□□□□□ -2.13
HMGB1P23-201ENST00000518743 K7EP34 96 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms