RNA–Protein interactions for RNA: ENST00000516330.1

SCARNA18.1-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 83 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18.1-201ENST00000516330 NDUFB1O75438 58 aa3.1□□□□□ -1.91
SCARNA18.1-201ENST00000516330 Q6ZQT0 140 aa3.1□□□□□ -1.91
SCARNA18.1-201ENST00000516330 IGHV6-1A0A0B4J1U7 121 aa3.09□□□□□ -1.91
SCARNA18.1-201ENST00000516330 KRTAP10-6P60371 365 aaPredicted RBP3.09□□□□□ -1.91
SCARNA18.1-201ENST00000516330 KRTAP9-6A0A140TA67 174 aa3.08□□□□□ -1.92
SCARNA18.1-201ENST00000516330 A8MWP4 228 aa3.08□□□□□ -1.92
SCARNA18.1-201ENST00000516330 FLGP20930 4061 aaPredicted RBP3.08□□□□□ -1.92
SCARNA18.1-201ENST00000516330 Q8N9P0 234 aaPredicted RBP3.07□□□□□ -1.92
SCARNA18.1-201ENST00000516330 RBM12B-AS1Q9P1G2 102 aa3.07□□□□□ -1.92
SCARNA18.1-201ENST00000516330 DEFB116Q30KQ4 102 aa3.06□□□□□ -1.92
SCARNA18.1-201ENST00000516330 MTURNQ8N3F0 131 aa3.06□□□□□ -1.92
SCARNA18.1-201ENST00000516330 MPLKIPQ8TAP9 179 aa3.06□□□□□ -1.92
SCARNA18.1-201ENST00000516330 C14orf132Q9NPU4 83 aa3.06□□□□□ -1.92
SCARNA18.1-201ENST00000516330 A0A1W2PPM0 123 aa3.05□□□□□ -1.92
SCARNA18.1-201ENST00000516330 C9orf118A6NHY6 69 aa3.05□□□□□ -1.92
SCARNA18.1-201ENST00000516330 BATFQ16520 125 aa3.05□□□□□ -1.92
SCARNA18.1-201ENST00000516330 ZCCHC13Q8WW36 166 aaKnown RBP3.05□□□□□ -1.92
SCARNA18.1-201ENST00000516330 NAA38Q9BRA0 125 aaKnown RBP3.05□□□□□ -1.92
SCARNA18.1-201ENST00000516330 FAM236DA0A1B0GTK5 79 aa3.04□□□□□ -1.92
SCARNA18.1-201ENST00000516330 FAM236CP0DP71 79 aa3.04□□□□□ -1.92
SCARNA18.1-201ENST00000516330 NREPQ16612 68 aa3.04□□□□□ -1.92
SCARNA18.1-201ENST00000516330 NOTCH2NLQ7Z3S9 236 aa3.04□□□□□ -1.92
SCARNA18.1-201ENST00000516330 C8orf17Q9NRJ1 99 aa3.04□□□□□ -1.92
SCARNA18.1-201ENST00000516330 IGKV3D-7A0A0C4DH55 119 aa3.03□□□□□ -1.92
SCARNA18.1-201ENST00000516330 LOC105371267A0A1B0GV96 52 aa3.03□□□□□ -1.92
SCARNA18.1-201ENST00000516330 TAX1BP3O14907 124 aa3.03□□□□□ -1.92
SCARNA18.1-201ENST00000516330 HRES1P13985 223 aa3.03□□□□□ -1.92
SCARNA18.1-201ENST00000516330 PRR15Q8IV56 129 aa3.03□□□□□ -1.92
SCARNA18.1-201ENST00000516330 Q6ZVQ6 151 aa3.02□□□□□ -1.93
SCARNA18.1-201ENST00000516330 TMEM254Q8TBM7 123 aa3.02□□□□□ -1.93
SCARNA18.1-201ENST00000516330 MMP24-AS1A0A0U1RRL7 71 aa3.01□□□□□ -1.93
SCARNA18.1-201ENST00000516330 MRPL34Q9BQ48 92 aaKnown RBP3.01□□□□□ -1.93
SCARNA18.1-201ENST00000516330 CRCT1Q9UGL9 99 aa3.01□□□□□ -1.93
SCARNA18.1-201ENST00000516330 SPCS1Q9Y6A9 102 aa3.01□□□□□ -1.93
SCARNA18.1-201ENST00000516330 SPINK7P58062 85 aa3□□□□□ -1.93
SCARNA18.1-201ENST00000516330 COL5A1-AS1Q5SY13 56 aa3□□□□□ -1.93
SCARNA18.1-201ENST00000516330 hDV103S1A0JD37 113 aa2.99□□□□□ -1.93
SCARNA18.1-201ENST00000516330 K7EQZ3 153 aa2.99□□□□□ -1.93
SCARNA18.1-201ENST00000516330 BPY2O14599 106 aa2.99□□□□□ -1.93
SCARNA18.1-201ENST00000516330 WFDC13Q8IUB5 93 aa2.99□□□□□ -1.93
SCARNA18.1-201ENST00000516330 FSIP2Q5CZC0 6907 aa2.98□□□□□ -1.93
SCARNA18.1-201ENST00000516330 KRTAP9-8Q9BYQ0 159 aa2.98□□□□□ -1.93
SCARNA18.1-201ENST00000516330 K7EP34 96 aa2.97□□□□□ -1.93
SCARNA18.1-201ENST00000516330 C7orf65Q6ZTY9 151 aa2.97□□□□□ -1.93
SCARNA18.1-201ENST00000516330 UBL5Q9BZL1 73 aa2.97□□□□□ -1.93
SCARNA18.1-201ENST00000516330 GTF2H5Q6ZYL4 71 aa2.96□□□□□ -1.94
SCARNA18.1-201ENST00000516330 NDUFS5O43920 106 aa2.95□□□□□ -1.94
SCARNA18.1-201ENST00000516330 PRO0461Q9UI25 63 aa2.95□□□□□ -1.94
SCARNA18.1-201ENST00000516330 SMCPP49901 116 aaPredicted RBP2.94□□□□□ -1.94
SCARNA18.1-201ENST00000516330 CXCL6P80162 114 aa2.94□□□□□ -1.94
SCARNA18.1-201ENST00000516330 CASC2Q6XLA1 102 aa2.94□□□□□ -1.94
SCARNA18.1-201ENST00000516330 HCG22E2RYF7 251 aa2.93□□□□□ -1.94
SCARNA18.1-201ENST00000516330 F8W1H4 67 aa2.93□□□□□ -1.94
SCARNA18.1-201ENST00000516330 MT2AP02795 61 aa2.93□□□□□ -1.94
SCARNA18.1-201ENST00000516330 LINC00846Q9NV44 126 aa2.93□□□□□ -1.94
SCARNA18.1-201ENST00000516330 MT1FP04733 61 aa2.91□□□□□ -1.94
SCARNA18.1-201ENST00000516330 H1FX-AS1Q4G0G2 97 aa2.91□□□□□ -1.94
SCARNA18.1-201ENST00000516330 IGKV2D-30A0A075B6S6 120 aa2.9□□□□□ -1.95
SCARNA18.1-201ENST00000516330 IGKV2-30P06310 120 aa2.9□□□□□ -1.95
SCARNA18.1-201ENST00000516330 Q5W150 140 aa2.9□□□□□ -1.95
SCARNA18.1-201ENST00000516330 Q8N9L7 120 aa2.9□□□□□ -1.95
SCARNA18.1-201ENST00000516330 TP53AIP1Q9HCN2 124 aa2.9□□□□□ -1.95
SCARNA18.1-201ENST00000516330 FAM240AA0A1B0GVK7 77 aa2.89□□□□□ -1.95
SCARNA18.1-201ENST00000516330 KRTAP10-10P60014 251 aa2.89□□□□□ -1.95
SCARNA18.1-201ENST00000516330 ATP5EP2Q5VTU8 51 aa2.89□□□□□ -1.95
SCARNA18.1-201ENST00000516330 ACYP1P07311 99 aa2.88□□□□□ -1.95
SCARNA18.1-201ENST00000516330 KRTAP9-3Q9BYQ3 159 aa2.88□□□□□ -1.95
SCARNA18.1-201ENST00000516330 USH2AO75445 5202 aa2.87□□□□□ -1.95
SCARNA18.1-201ENST00000516330 ETDBQ3ZM63 59 aa2.87□□□□□ -1.95
SCARNA18.1-201ENST00000516330 TRAV22A0A0B4J277 110 aa2.84□□□□□ -1.95
SCARNA18.1-201ENST00000516330 PCP4L1A6NKN8 68 aa2.84□□□□□ -1.95
SCARNA18.1-201ENST00000516330 LCE2BO14633 110 aa2.84□□□□□ -1.95
SCARNA18.1-201ENST00000516330 SSPOA2VEC9 5147 aa2.84□□□□□ -1.96
SCARNA18.1-201ENST00000516330 LOC101927531A0A1B0GV80 90 aa2.83□□□□□ -1.96
SCARNA18.1-201ENST00000516330 C4orf26Q17RF5 130 aa2.83□□□□□ -1.96
SCARNA18.1-201ENST00000516330 ATOX1O00244 68 aa2.82□□□□□ -1.96
SCARNA18.1-201ENST00000516330 S4R3F8 94 aa2.82□□□□□ -1.96
SCARNA18.1-201ENST00000516330 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.81□□□□□ -1.96
SCARNA18.1-201ENST00000516330 KRTAP19-6Q3LI70 58 aa2.81□□□□□ -1.96
SCARNA18.1-201ENST00000516330 KRTAP19-1Q8IUB9 90 aa2.8□□□□□ -1.96
SCARNA18.1-201ENST00000516330 C1orf64Q8NEQ6 169 aa2.8□□□□□ -1.96
SCARNA18.1-201ENST00000516330 UQCRQO14949 82 aa2.79□□□□□ -1.96
SCARNA18.1-201ENST00000516330 CSAG1Q6PB30 78 aa2.79□□□□□ -1.96
SCARNA18.1-201ENST00000516330 LINC00643Q86TS7 51 aa2.79□□□□□ -1.96
SCARNA18.1-201ENST00000516330 FCGBPQ9Y6R7 5405 aaPredicted RBP2.79□□□□□ -1.96
SCARNA18.1-201ENST00000516330 KRTAP9-7A8MTY7 169 aa2.78□□□□□ -1.96
SCARNA18.1-201ENST00000516330 A8MUN3 132 aa2.78□□□□□ -1.96
SCARNA18.1-201ENST00000516330 CYP4F30PQ9H0H9 118 aa2.78□□□□□ -1.96
SCARNA18.1-201ENST00000516330 FAM236AA0A1B0GUQ0 79 aa2.77□□□□□ -1.97
SCARNA18.1-201ENST00000516330 FAM236BA0A1B0GV22 79 aa2.77□□□□□ -1.97
SCARNA18.1-201ENST00000516330 HIST1H4AP62805 103 aaKnown RBP2.77□□□□□ -1.97
SCARNA18.1-201ENST00000516330 C5orf47Q569G3 176 aa2.77□□□□□ -1.97
SCARNA18.1-201ENST00000516330 LCA10Q71F78 164 aa2.77□□□□□ -1.97
SCARNA18.1-201ENST00000516330 KRTAP3-1Q9BYR8 98 aa2.77□□□□□ -1.97
SCARNA18.1-201ENST00000516330 J3QR89 54 aa2.76□□□□□ -1.97
SCARNA18.1-201ENST00000516330 H0Y9P7 68 aa2.75□□□□□ -1.97
SCARNA18.1-201ENST00000516330 H0YAA0 97 aa2.75□□□□□ -1.97
SCARNA18.1-201ENST00000516330 KLKP1Q107X0 134 aa2.74□□□□□ -1.97
SCARNA18.1-201ENST00000516330 SPRR2GQ9BYE4 73 aa2.74□□□□□ -1.97
SCARNA18.1-201ENST00000516330 CRIPTQ9P021 101 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms