RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 PRO0461Q9UI25 63 aa8.03□□□□□ -1.12
RNF4-210ENST00000508235 IGHV6-1A0A0B4J1U7 121 aa8.02□□□□□ -1.13
RNF4-210ENST00000508235 C8orf87E5RJ46 101 aa8.02□□□□□ -1.13
RNF4-210ENST00000508235 NDUFB1O75438 58 aa8.02□□□□□ -1.13
RNF4-210ENST00000508235 NREPQ16612 68 aa8.02□□□□□ -1.13
RNF4-210ENST00000508235 A0A1B0GVX0 72 aa8.01□□□□□ -1.13
RNF4-210ENST00000508235 C20orf166-AS1Q96NR2 134 aa8.01□□□□□ -1.13
RNF4-210ENST00000508235 F8W1H4 67 aa8□□□□□ -1.13
RNF4-210ENST00000508235 KRTAP4-1Q9BYQ7 146 aa8□□□□□ -1.13
RNF4-210ENST00000508235 A8MUU9 505 aa7.98□□□□□ -1.13
RNF4-210ENST00000508235 A8MWP4 228 aa7.97□□□□□ -1.13
RNF4-210ENST00000508235 MUC17Q685J3 4493 aa7.96□□□□□ -1.14
RNF4-210ENST00000508235 NOTCH2NLQ7Z3S9 236 aa7.95□□□□□ -1.14
RNF4-210ENST00000508235 KRTAP16-1A8MUX0 517 aa7.94□□□□□ -1.14
RNF4-210ENST00000508235 MUC2Q02817 5179 aa7.91□□□□□ -1.14
RNF4-210ENST00000508235 IGKV3D-7A0A0C4DH55 119 aa7.91□□□□□ -1.14
RNF4-210ENST00000508235 KRTAP3-3Q9BYR6 98 aa7.91□□□□□ -1.14
RNF4-210ENST00000508235 KRTAP3-2Q9BYR7 98 aa7.91□□□□□ -1.14
RNF4-210ENST00000508235 BPY2O14599 106 aa7.9□□□□□ -1.14
RNF4-210ENST00000508235 ETDBQ3ZM63 59 aa7.89□□□□□ -1.15
RNF4-210ENST00000508235 Q6ZVQ6 151 aa7.89□□□□□ -1.15
RNF4-210ENST00000508235 PRR15Q8IV56 129 aa7.89□□□□□ -1.15
RNF4-210ENST00000508235 UBL5Q9BZL1 73 aa7.89□□□□□ -1.15
RNF4-210ENST00000508235 C8orf17Q9NRJ1 99 aa7.89□□□□□ -1.15
RNF4-210ENST00000508235 LINC00846Q9NV44 126 aa7.85□□□□□ -1.15
RNF4-210ENST00000508235 K7EQZ3 153 aa7.84□□□□□ -1.15
RNF4-210ENST00000508235 Q8N9P0 234 aaPredicted RBP7.83□□□□□ -1.16
RNF4-210ENST00000508235 LCE2AQ5TA79 106 aaPredicted RBP7.81□□□□□ -1.16
RNF4-210ENST00000508235 MMP24-AS1A0A0U1RRL7 71 aa7.8□□□□□ -1.16
RNF4-210ENST00000508235 TMEM254Q8TBM7 123 aa7.8□□□□□ -1.16
RNF4-210ENST00000508235 hDV103S1A0JD37 113 aa7.79□□□□□ -1.16
RNF4-210ENST00000508235 ZCCHC13Q8WW36 166 aaKnown RBP7.79□□□□□ -1.16
RNF4-210ENST00000508235 MRPL34Q9BQ48 92 aaKnown RBP7.79□□□□□ -1.16
RNF4-210ENST00000508235 A0A1B0GV90 55 aa7.77□□□□□ -1.17
RNF4-210ENST00000508235 KRTAP19-2Q3LHN2 52 aa7.77□□□□□ -1.17
RNF4-210ENST00000508235 COX6B2Q6YFQ2 88 aa7.77□□□□□ -1.17
RNF4-210ENST00000508235 ACYP1P07311 99 aa7.76□□□□□ -1.17
RNF4-210ENST00000508235 LCE2CQ5TA81 110 aa7.75□□□□□ -1.17
RNF4-210ENST00000508235 FAT4Q6V0I7 4981 aa7.74□□□□□ -1.17
RNF4-210ENST00000508235 Q8N9L7 120 aa7.74□□□□□ -1.17
RNF4-210ENST00000508235 FAM240AA0A1B0GVK7 77 aa7.73□□□□□ -1.17
RNF4-210ENST00000508235 CXCL6P80162 114 aa7.73□□□□□ -1.17
RNF4-210ENST00000508235 CASC2Q6XLA1 102 aa7.73□□□□□ -1.17
RNF4-210ENST00000508235 NDUFS5O43920 106 aa7.72□□□□□ -1.17
RNF4-210ENST00000508235 WFDC13Q8IUB5 93 aa7.71□□□□□ -1.18
RNF4-210ENST00000508235 HCG22E2RYF7 251 aa7.68□□□□□ -1.18
RNF4-210ENST00000508235 RBM12B-AS1Q9P1G2 102 aa7.68□□□□□ -1.18
RNF4-210ENST00000508235 MT1HP80294 61 aa7.67□□□□□ -1.18
RNF4-210ENST00000508235 SPINK7P58062 85 aa7.66□□□□□ -1.18
RNF4-210ENST00000508235 ATP5EP2Q5VTU8 51 aa7.65□□□□□ -1.18
RNF4-210ENST00000508235 HRES1P13985 223 aa7.63□□□□□ -1.19
RNF4-210ENST00000508235 FAM236DA0A1B0GTK5 79 aa7.62□□□□□ -1.19
RNF4-210ENST00000508235 FAM236CP0DP71 79 aa7.62□□□□□ -1.19
RNF4-210ENST00000508235 M0R2T5 61 aa7.61□□□□□ -1.19
RNF4-210ENST00000508235 MPLKIPQ8TAP9 179 aa7.6□□□□□ -1.19
RNF4-210ENST00000508235 J3QR89 54 aa7.59□□□□□ -1.19
RNF4-210ENST00000508235 Q5W150 140 aa7.56□□□□□ -1.2
RNF4-210ENST00000508235 LINC00643Q86TS7 51 aa7.56□□□□□ -1.2
RNF4-210ENST00000508235 TP53AIP1Q9HCN2 124 aa7.56□□□□□ -1.2
RNF4-210ENST00000508235 HIST1H4AP62805 103 aaKnown RBP7.54□□□□□ -1.2
RNF4-210ENST00000508235 C7orf65Q6ZTY9 151 aa7.54□□□□□ -1.2
RNF4-210ENST00000508235 IGKV2D-30A0A075B6S6 120 aa7.52□□□□□ -1.21
RNF4-210ENST00000508235 IGKV2-30P06310 120 aa7.52□□□□□ -1.21
RNF4-210ENST00000508235 KRTAP10-6P60371 365 aaPredicted RBP7.49□□□□□ -1.21
RNF4-210ENST00000508235 LORP23490 312 aaPredicted RBP7.47□□□□□ -1.21
RNF4-210ENST00000508235 A0A087WVE0 104 aa7.4□□□□□ -1.22
RNF4-210ENST00000508235 TRAV22A0A0B4J277 110 aa7.4□□□□□ -1.22
RNF4-210ENST00000508235 UQCRQO14949 82 aa7.39□□□□□ -1.23
RNF4-210ENST00000508235 KRTAP9-2Q9BYQ4 174 aa7.39□□□□□ -1.23
RNF4-210ENST00000508235 K7ERU9 68 aa7.38□□□□□ -1.23
RNF4-210ENST00000508235 H1FX-AS1Q4G0G2 97 aa7.38□□□□□ -1.23
RNF4-210ENST00000508235 C4orf26Q17RF5 130 aa7.36□□□□□ -1.23
RNF4-210ENST00000508235 FLGP20930 4061 aaPredicted RBP7.36□□□□□ -1.23
RNF4-210ENST00000508235 LOC101927531A0A1B0GV80 90 aa7.35□□□□□ -1.23
RNF4-210ENST00000508235 ATOX1O00244 68 aa7.35□□□□□ -1.23
RNF4-210ENST00000508235 CYP4F30PQ9H0H9 118 aa7.32□□□□□ -1.24
RNF4-210ENST00000508235 H0Y9P7 68 aa7.31□□□□□ -1.24
RNF4-210ENST00000508235 KRTAP9-8Q9BYQ0 159 aa7.29□□□□□ -1.24
RNF4-210ENST00000508235 IMUPQ9GZP8 106 aa7.29□□□□□ -1.24
RNF4-210ENST00000508235 C1orf64Q8NEQ6 169 aa7.28□□□□□ -1.24
RNF4-210ENST00000508235 SCGB1A1P11684 91 aa7.27□□□□□ -1.25
RNF4-210ENST00000508235 OCR1Q9BZK8 76 aa7.27□□□□□ -1.25
RNF4-210ENST00000508235 MP68P56378 58 aa7.25□□□□□ -1.25
RNF4-210ENST00000508235 C5orf47Q569G3 176 aa7.24□□□□□ -1.25
RNF4-210ENST00000508235 MT2AP02795 61 aa7.21□□□□□ -1.26
RNF4-210ENST00000508235 MT-ATP8P03928 68 aa7.21□□□□□ -1.26
RNF4-210ENST00000508235 LINC00208Q96KT6 92 aa7.21□□□□□ -1.26
RNF4-210ENST00000508235 KRTAP3-1Q9BYR8 98 aa7.21□□□□□ -1.26
RNF4-210ENST00000508235 H3BPC8 53 aa7.19□□□□□ -1.26
RNF4-210ENST00000508235 S4R3F8 94 aa7.18□□□□□ -1.26
RNF4-210ENST00000508235 KRTAP10-10P60014 251 aa7.17□□□□□ -1.26
RNF4-210ENST00000508235 MT1FP04733 61 aa7.15□□□□□ -1.26
RNF4-210ENST00000508235 SMIM20Q8N5G0 67 aa7.15□□□□□ -1.26
RNF4-210ENST00000508235 FAM236AA0A1B0GUQ0 79 aa7.13□□□□□ -1.27
RNF4-210ENST00000508235 FAM236BA0A1B0GV22 79 aa7.13□□□□□ -1.27
RNF4-210ENST00000508235 CSAG1Q6PB30 78 aa7.11□□□□□ -1.27
RNF4-210ENST00000508235 LCA10Q71F78 164 aa7.11□□□□□ -1.27
RNF4-210ENST00000508235 A8MUN3 132 aa7.1□□□□□ -1.27
RNF4-210ENST00000508235 KLKP1Q107X0 134 aa7.1□□□□□ -1.27
RNF4-210ENST00000508235 TRAV7A0A075B6U4 112 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms