RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 TRBV20-1A0A075B6N2 111 aa1.25□□□□□ -2.21
SMC4-224ENST00000494612 A6NN06 94 aa1.25□□□□□ -2.21
SMC4-224ENST00000494612 NDUFA1O15239 70 aa1.25□□□□□ -2.21
SMC4-224ENST00000494612 NCR2O95944 276 aa1.25□□□□□ -2.21
SMC4-224ENST00000494612 ADCYAP1P18509 176 aa1.25□□□□□ -2.21
SMC4-224ENST00000494612 SPATA45Q537H7 98 aa1.25□□□□□ -2.21
SMC4-224ENST00000494612 OCIAD2Q56VL3 154 aa1.25□□□□□ -2.21
SMC4-224ENST00000494612 CSAG1Q6PB30 78 aa1.25□□□□□ -2.21
SMC4-224ENST00000494612 C5orf38Q86SI9 138 aa1.25□□□□□ -2.21
SMC4-224ENST00000494612 MRPL35Q9NZE8 188 aaKnown RBP1.25□□□□□ -2.21
SMC4-224ENST00000494612 UBE2D4Q9Y2X8 147 aa1.25□□□□□ -2.21
SMC4-224ENST00000494612 BCE1O60756 84 aa1.24□□□□□ -2.21
SMC4-224ENST00000494612 SIX6O95475 246 aa1.24□□□□□ -2.21
SMC4-224ENST00000494612 IGKCP01834 107 aa1.24□□□□□ -2.21
SMC4-224ENST00000494612 COX6B2Q6YFQ2 88 aa1.24□□□□□ -2.21
SMC4-224ENST00000494612 ATP11AUNQ6ZP68 121 aa1.24□□□□□ -2.21
SMC4-224ENST00000494612 PSMG3Q9BT73 122 aaPredicted RBP1.24□□□□□ -2.21
SMC4-224ENST00000494612 NDUFA12Q9UI09 145 aa1.24□□□□□ -2.21
SMC4-224ENST00000494612 F2Z2F3 143 aa1.23□□□□□ -2.21
SMC4-224ENST00000494612 I3L3M4 83 aa1.23□□□□□ -2.21
SMC4-224ENST00000494612 MPC2O95563 127 aa1.23□□□□□ -2.21
SMC4-224ENST00000494612 SERF2P84101 59 aa1.23□□□□□ -2.21
SMC4-224ENST00000494612 SPAG11AQ6PDA7 123 aa1.23□□□□□ -2.21
SMC4-224ENST00000494612 BAGE2Q86Y30 109 aa1.23□□□□□ -2.21
SMC4-224ENST00000494612 ATOH7Q8N100 152 aa1.23□□□□□ -2.21
SMC4-224ENST00000494612 PPP1R1CQ8WVI7 109 aa1.23□□□□□ -2.21
SMC4-224ENST00000494612 RPL39LQ96EH5 51 aaKnown RBP1.23□□□□□ -2.21
SMC4-224ENST00000494612 TCEAL7Q9BRU2 100 aa1.23□□□□□ -2.21
SMC4-224ENST00000494612 CDC42SE2Q9NRR3 84 aa1.23□□□□□ -2.21
SMC4-224ENST00000494612 TMEM242Q9NWH2 141 aa1.23□□□□□ -2.21
SMC4-224ENST00000494612 C6orf48Q9UBA6 75 aa1.23□□□□□ -2.21
SMC4-224ENST00000494612 C22orf24Q9Y442 160 aa1.23□□□□□ -2.21
SMC4-224ENST00000494612 FLGP20930 4061 aaPredicted RBP1.23□□□□□ -2.21
SMC4-224ENST00000494612 TRBV30A0A0K0K1B3 111 aa1.22□□□□□ -2.21
SMC4-224ENST00000494612 CTXND1A0A1B0GTU2 59 aa1.22□□□□□ -2.21
SMC4-224ENST00000494612 C7orf77A4D0Y5 90 aa1.22□□□□□ -2.21
SMC4-224ENST00000494612 FCER1GP30273 86 aa1.22□□□□□ -2.21
SMC4-224ENST00000494612 KCNRGQ8N5I3 272 aa1.22□□□□□ -2.21
SMC4-224ENST00000494612 ST20Q9HBF5 79 aa1.22□□□□□ -2.21
SMC4-224ENST00000494612 GPR98Q8WXG9 6306 aa1.22□□□□□ -2.21
SMC4-224ENST00000494612 NCR3O14931 201 aa1.21□□□□□ -2.22
SMC4-224ENST00000494612 PDE6GP18545 87 aa1.21□□□□□ -2.22
SMC4-224ENST00000494612 PRLHP81277 87 aa1.21□□□□□ -2.22
SMC4-224ENST00000494612 KRTAP19-2Q3LHN2 52 aa1.21□□□□□ -2.22
SMC4-224ENST00000494612 Q6ZUT4 128 aa1.21□□□□□ -2.22
SMC4-224ENST00000494612 TMEM191AQ9H0A3 160 aa1.21□□□□□ -2.22
SMC4-224ENST00000494612 TOMM7Q9P0U1 55 aa1.21□□□□□ -2.22
SMC4-224ENST00000494612 SPINK1P00995 79 aa1.2□□□□□ -2.22
SMC4-224ENST00000494612 GNG4P50150 75 aa1.2□□□□□ -2.22
SMC4-224ENST00000494612 RPL7L1Q6DKI1 246 aaKnown RBP1.2□□□□□ -2.22
SMC4-224ENST00000494612 C9orf62Q8N4C0 152 aa1.2□□□□□ -2.22
SMC4-224ENST00000494612 LINC00846Q9NV44 126 aa1.2□□□□□ -2.22
SMC4-224ENST00000494612 A0A1B0GV90 55 aa1.19□□□□□ -2.22
SMC4-224ENST00000494612 PPP1R17O96001 155 aa1.19□□□□□ -2.22
SMC4-224ENST00000494612 FAM213BQ8TBF2 198 aa1.19□□□□□ -2.22
SMC4-224ENST00000494612 PPDPFLQ8WWR9 84 aa1.19□□□□□ -2.22
SMC4-224ENST00000494612 CNFNQ9BYD5 112 aa1.19□□□□□ -2.22
SMC4-224ENST00000494612 GNG13Q9P2W3 67 aa1.19□□□□□ -2.22
SMC4-224ENST00000494612 MUC12Q9UKN1 5478 aa1.19□□□□□ -2.22
SMC4-224ENST00000494612 FXYD6-FXYD2A0A087WZ82 144 aa1.18□□□□□ -2.22
SMC4-224ENST00000494612 C9orf92A6NGG3 77 aa1.18□□□□□ -2.22
SMC4-224ENST00000494612 F8VRH5 84 aa1.18□□□□□ -2.22
SMC4-224ENST00000494612 CCKP06307 115 aa1.18□□□□□ -2.22
SMC4-224ENST00000494612 IFI27P40305 119 aaPredicted RBP1.18□□□□□ -2.22
SMC4-224ENST00000494612 POLR2KP53803 58 aaKnown RBP1.18□□□□□ -2.22
SMC4-224ENST00000494612 RPS29P62273 56 aaKnown RBP1.18□□□□□ -2.22
SMC4-224ENST00000494612 RPL39P62891 51 aaKnown RBP1.18□□□□□ -2.22
SMC4-224ENST00000494612 Q8IZM0 81 aa1.18□□□□□ -2.22
SMC4-224ENST00000494612 DMAC1Q96GE9 116 aa1.18□□□□□ -2.22
SMC4-224ENST00000494612 SPRR4Q96PI1 79 aa1.18□□□□□ -2.22
SMC4-224ENST00000494612 MANBALQ9NQG1 85 aa1.18□□□□□ -2.22
SMC4-224ENST00000494612 A0A1B0GUT8 65 aa1.17□□□□□ -2.22
SMC4-224ENST00000494612 HIGD1CA8MV81 97 aa1.17□□□□□ -2.22
SMC4-224ENST00000494612 UMAD1C9J7I0 102 aa1.17□□□□□ -2.22
SMC4-224ENST00000494612 SNCGO76070 127 aa1.17□□□□□ -2.22
SMC4-224ENST00000494612 C9orf153Q5TBE3 101 aa1.17□□□□□ -2.22
SMC4-224ENST00000494612 LINC01545Q5VT33 79 aa1.17□□□□□ -2.22
SMC4-224ENST00000494612 TMEM141Q96I45 108 aa1.17□□□□□ -2.22
SMC4-224ENST00000494612 C2orf88Q9BSF0 95 aa1.17□□□□□ -2.22
SMC4-224ENST00000494612 LOC101927531A0A1B0GV80 90 aa1.16□□□□□ -2.22
SMC4-224ENST00000494612 DLEU1O43261 78 aa1.16□□□□□ -2.22
SMC4-224ENST00000494612 KRTAP20-1Q3LI63 56 aa1.16□□□□□ -2.22
SMC4-224ENST00000494612 Q5BKY6 102 aa1.16□□□□□ -2.22
SMC4-224ENST00000494612 MEIG1Q5JSS6 88 aa1.16□□□□□ -2.22
SMC4-224ENST00000494612 SSBP3-AS1Q7Z2R9 100 aa1.16□□□□□ -2.22
SMC4-224ENST00000494612 C20orf78Q9BR46 151 aa1.16□□□□□ -2.22
SMC4-224ENST00000494612 SMIM2Q9BVW6 85 aa1.16□□□□□ -2.22
SMC4-224ENST00000494612 ETDCA0A1B0GVM5 59 aa1.15□□□□□ -2.23
SMC4-224ENST00000494612 CCDC179H3BU77 68 aa1.15□□□□□ -2.23
SMC4-224ENST00000494612 RPL37P61927 97 aaKnown RBP1.15□□□□□ -2.23
SMC4-224ENST00000494612 SEC11AP67812 179 aa1.15□□□□□ -2.23
SMC4-224ENST00000494612 Q6ZQY7 126 aa1.15□□□□□ -2.23
SMC4-224ENST00000494612 COX7B2Q8TF08 81 aa1.15□□□□□ -2.23
SMC4-224ENST00000494612 COPS9Q8WXC6 57 aa1.15□□□□□ -2.23
SMC4-224ENST00000494612 S100ZQ8WXG8 99 aa1.15□□□□□ -2.23
SMC4-224ENST00000494612 SEC11CQ9BY50 192 aa1.15□□□□□ -2.23
SMC4-224ENST00000494612 CDKN2A-AS1Q9UH64 79 aa1.15□□□□□ -2.23
SMC4-224ENST00000494612 MDN1Q9NU22 5596 aa1.15□□□□□ -2.23
SMC4-224ENST00000494612 KANTRA0A1W2PQU2 76 aa1.14□□□□□ -2.23
SMC4-224ENST00000494612 C20orf202A1L168 122 aa1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms