RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 CDC42SE1Q9NRR8 79 aa5.17□□□□□ -1.58
HDAC6-234ENST00000493923 UBR4Q5T4S7 5183 aa5.16□□□□□ -1.58
HDAC6-234ENST00000493923 IGKV3OR2-268A0A0C4DH90 116 aa5.16□□□□□ -1.58
HDAC6-234ENST00000493923 LOC101927531A0A1B0GV80 90 aa5.16□□□□□ -1.58
HDAC6-234ENST00000493923 CHTF8P0CG12 524 aa5.15□□□□□ -1.59
HDAC6-234ENST00000493923 REG3AQ06141 175 aa5.15□□□□□ -1.59
HDAC6-234ENST00000493923 ASB16-AS1Q495Z4 193 aa5.15□□□□□ -1.59
HDAC6-234ENST00000493923 SMIM29Q86T20 159 aa5.15□□□□□ -1.59
HDAC6-234ENST00000493923 C9orf163Q8N9P6 203 aa5.15□□□□□ -1.59
HDAC6-234ENST00000493923 LINC00208Q96KT6 92 aa5.15□□□□□ -1.59
HDAC6-234ENST00000493923 GVQW2A0A096LPI5 108 aaPredicted RBP5.14□□□□□ -1.59
HDAC6-234ENST00000493923 C14orf177Q52M58 125 aa5.14□□□□□ -1.59
HDAC6-234ENST00000493923 PRR15LQ9BU68 103 aa5.14□□□□□ -1.59
HDAC6-234ENST00000493923 A0A087X002 238 aa5.13□□□□□ -1.59
HDAC6-234ENST00000493923 A6NED7 52 aa5.13□□□□□ -1.59
HDAC6-234ENST00000493923 RPL37AP61513 92 aaKnown RBP5.13□□□□□ -1.59
HDAC6-234ENST00000493923 KIAA0087Q14695 138 aa5.13□□□□□ -1.59
HDAC6-234ENST00000493923 C15orf56Q8N910 161 aa5.13□□□□□ -1.59
HDAC6-234ENST00000493923 Q8N9P0 234 aaPredicted RBP5.13□□□□□ -1.59
HDAC6-234ENST00000493923 NKAPP1Q8N9T2 125 aa5.13□□□□□ -1.59
HDAC6-234ENST00000493923 SPTSSBQ8NFR3 76 aa5.13□□□□□ -1.59
HDAC6-234ENST00000493923 KCNQ1DNQ9H478 68 aa5.13□□□□□ -1.59
HDAC6-234ENST00000493923 C8orf87E5RJ46 101 aa5.12□□□□□ -1.59
HDAC6-234ENST00000493923 MT1HL1P0DM35 61 aa5.12□□□□□ -1.59
HDAC6-234ENST00000493923 PRR3P79522 188 aaKnown RBP5.12□□□□□ -1.59
HDAC6-234ENST00000493923 KRTAP19-4Q3LI73 84 aa5.12□□□□□ -1.59
HDAC6-234ENST00000493923 CNBPP62633 177 aaKnown RBP5.11□□□□□ -1.59
HDAC6-234ENST00000493923 IGLV5-48A0A075B6I7 105 aa5.1□□□□□ -1.59
HDAC6-234ENST00000493923 C10orf25Q5T742 122 aa5.1□□□□□ -1.59
HDAC6-234ENST00000493923 Q8N9L7 120 aa5.1□□□□□ -1.59
HDAC6-234ENST00000493923 KRTAP4-9Q9BYQ8 210 aa5.1□□□□□ -1.59
HDAC6-234ENST00000493923 SPACA4Q8TDM5 124 aa5.09□□□□□ -1.59
HDAC6-234ENST00000493923 LRP2P98164 4655 aa5.09□□□□□ -1.59
HDAC6-234ENST00000493923 H3BS24 57 aa5.08□□□□□ -1.6
HDAC6-234ENST00000493923 SPAG11BQ08648 103 aa5.08□□□□□ -1.6
HDAC6-234ENST00000493923 CASC2Q6XLA1 102 aa5.08□□□□□ -1.6
HDAC6-234ENST00000493923 CHCHD10Q8WYQ3 142 aaPredicted RBP5.08□□□□□ -1.6
HDAC6-234ENST00000493923 C9orf116Q5BN46 136 aaPredicted RBP5.07□□□□□ -1.6
HDAC6-234ENST00000493923 PLAC8Q9NZF1 115 aa5.07□□□□□ -1.6
HDAC6-234ENST00000493923 Q8NBF4 154 aa5.06□□□□□ -1.6
HDAC6-234ENST00000493923 SPRR4Q96PI1 79 aa5.06□□□□□ -1.6
HDAC6-234ENST00000493923 DHRS4-AS1Q9P1J3 65 aa5.06□□□□□ -1.6
HDAC6-234ENST00000493923 LINC01558Q9Y6Z2 57 aa5.06□□□□□ -1.6
HDAC6-234ENST00000493923 A0A096LNI7 61 aa5.05□□□□□ -1.6
HDAC6-234ENST00000493923 IGKV2-24A0A0C4DH68 120 aa5.05□□□□□ -1.6
HDAC6-234ENST00000493923 SERTAD4-AS1Q5TG53 156 aa5.04□□□□□ -1.6
HDAC6-234ENST00000493923 PLA2G2DQ9UNK4 145 aa5.04□□□□□ -1.6
HDAC6-234ENST00000493923 MOBPQ13875 183 aa5.03□□□□□ -1.6
HDAC6-234ENST00000493923 LCE4AQ5TA78 99 aa5.03□□□□□ -1.6
HDAC6-234ENST00000493923 Q8NDZ9 215 aa5.03□□□□□ -1.6
HDAC6-234ENST00000493923 DSCR10P59022 87 aa5.02□□□□□ -1.61
HDAC6-234ENST00000493923 ST20-AS1Q8NBB2 130 aa5.02□□□□□ -1.61
HDAC6-234ENST00000493923 H0Y9P7 68 aa5.01□□□□□ -1.61
HDAC6-234ENST00000493923 PRR4Q16378 134 aa5.01□□□□□ -1.61
HDAC6-234ENST00000493923 C1orf137Q5JT78 98 aa5.01□□□□□ -1.61
HDAC6-234ENST00000493923 UNQ6190/PRO20217Q6UXQ8 127 aa5.01□□□□□ -1.61
HDAC6-234ENST00000493923 COA5Q86WW8 74 aa5.01□□□□□ -1.61
HDAC6-234ENST00000493923 RNF213Q63HN8 5207 aa5□□□□□ -1.61
HDAC6-234ENST00000493923 IGLV7-46A0A075B6I9 117 aa5□□□□□ -1.61
HDAC6-234ENST00000493923 A0A1W2PNN7 141 aa5□□□□□ -1.61
HDAC6-234ENST00000493923 LINC01554Q52M75 96 aa5□□□□□ -1.61
HDAC6-234ENST00000493923 A0A1W2PNM2 257 aa4.99□□□□□ -1.61
HDAC6-234ENST00000493923 K7EQZ3 153 aa4.99□□□□□ -1.61
HDAC6-234ENST00000493923 Q8N377 158 aa4.98□□□□□ -1.61
HDAC6-234ENST00000493923 C7orf33Q8WU49 177 aa4.98□□□□□ -1.61
HDAC6-234ENST00000493923 A8MU10 97 aa4.97□□□□□ -1.61
HDAC6-234ENST00000493923 KRTAP10-8P60410 259 aa4.97□□□□□ -1.61
HDAC6-234ENST00000493923 KRTAP11-1Q8IUC1 163 aa4.97□□□□□ -1.61
HDAC6-234ENST00000493923 KRTAP4-2Q9BYR5 136 aa4.97□□□□□ -1.61
HDAC6-234ENST00000493923 C6orf48Q9UBA6 75 aa4.97□□□□□ -1.61
HDAC6-234ENST00000493923 LPAP08519 4548 aa4.96□□□□□ -1.62
HDAC6-234ENST00000493923 KRTAP7-1Q8IUC3 87 aa4.95□□□□□ -1.62
HDAC6-234ENST00000493923 CAMK2N2Q96S95 79 aa4.95□□□□□ -1.62
HDAC6-234ENST00000493923 FAM168BA1KXE4 195 aa4.94□□□□□ -1.62
HDAC6-234ENST00000493923 RPL37AP8A6NKH3 93 aa4.94□□□□□ -1.62
HDAC6-234ENST00000493923 LINC00313P59037 77 aa4.94□□□□□ -1.62
HDAC6-234ENST00000493923 TP53AIP1Q9HCN2 124 aa4.94□□□□□ -1.62
HDAC6-234ENST00000493923 PSORS1C2Q9UIG4 136 aa4.94□□□□□ -1.62
HDAC6-234ENST00000493923 Q6ZRX8 168 aa4.93□□□□□ -1.62
HDAC6-234ENST00000493923 DEFB105AQ8NG35 78 aa4.93□□□□□ -1.62
HDAC6-234ENST00000493923 XAGE1AQ9HD64 81 aa4.93□□□□□ -1.62
HDAC6-234ENST00000493923 KRTAP9-7A8MTY7 169 aa4.92□□□□□ -1.62
HDAC6-234ENST00000493923 SPINK6Q6UWN8 80 aa4.92□□□□□ -1.62
HDAC6-234ENST00000493923 WFDC13Q8IUB5 93 aa4.92□□□□□ -1.62
HDAC6-234ENST00000493923 KRTAP4-11Q9BYQ6 195 aa4.91□□□□□ -1.62
HDAC6-234ENST00000493923 IGLV8-61A0A075B6I0 122 aa4.9□□□□□ -1.63
HDAC6-234ENST00000493923 IGLV5-37A0A075B6J1 123 aa4.9□□□□□ -1.63
HDAC6-234ENST00000493923 PRR26Q8N8Z3 221 aa4.9□□□□□ -1.63
HDAC6-234ENST00000493923 RETNLBQ9BQ08 111 aa4.9□□□□□ -1.63
HDAC6-234ENST00000493923 A8MWP4 228 aa4.89□□□□□ -1.63
HDAC6-234ENST00000493923 SPRR1AP35321 89 aa4.89□□□□□ -1.63
HDAC6-234ENST00000493923 REG3GQ6UW15 175 aa4.89□□□□□ -1.63
HDAC6-234ENST00000493923 SPAG11AQ6PDA7 123 aa4.88□□□□□ -1.63
HDAC6-234ENST00000493923 IGLV7-43P04211 117 aa4.87□□□□□ -1.63
HDAC6-234ENST00000493923 TLX1NBP0CAT3 122 aa4.87□□□□□ -1.63
HDAC6-234ENST00000493923 SPINK7P58062 85 aa4.87□□□□□ -1.63
HDAC6-234ENST00000493923 KRTAP1-4P0C5Y4 121 aa4.86□□□□□ -1.63
HDAC6-234ENST00000493923 KRTAP4-16G5E9R7 235 aaPredicted RBP4.85□□□□□ -1.63
HDAC6-234ENST00000493923 LCE5AQ5TCM9 118 aa4.85□□□□□ -1.63
HDAC6-234ENST00000493923 H0Y9J4 135 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms