RNA–Protein interactions for RNA: ENST00000489961.1

VPS13D-210, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-210ENST00000489961 A0A1B0GVX0 72 aa5.86□□□□□ -1.47
VPS13D-210ENST00000489961 C8orf87E5RJ46 101 aa5.86□□□□□ -1.47
VPS13D-210ENST00000489961 A0A1B0GV90 55 aa5.85□□□□□ -1.47
VPS13D-210ENST00000489961 PCOTHQ58A44 107 aa5.85□□□□□ -1.47
VPS13D-210ENST00000489961 A8MWP4 228 aa5.84□□□□□ -1.47
VPS13D-210ENST00000489961 Q75L30 129 aa5.84□□□□□ -1.47
VPS13D-210ENST00000489961 Q6ZVQ6 151 aa5.83□□□□□ -1.48
VPS13D-210ENST00000489961 UBL5Q9BZL1 73 aa5.83□□□□□ -1.48
VPS13D-210ENST00000489961 MUC17Q685J3 4493 aa5.82□□□□□ -1.48
VPS13D-210ENST00000489961 BPY2O14599 106 aa5.82□□□□□ -1.48
VPS13D-210ENST00000489961 ATP11AUNQ6ZP68 121 aa5.82□□□□□ -1.48
VPS13D-210ENST00000489961 NOTCH2NLQ7Z3S9 236 aa5.82□□□□□ -1.48
VPS13D-210ENST00000489961 C20orf166-AS1Q96NR2 134 aa5.82□□□□□ -1.48
VPS13D-210ENST00000489961 IGKV3D-7A0A0C4DH55 119 aa5.81□□□□□ -1.48
VPS13D-210ENST00000489961 A8MUU9 505 aa5.81□□□□□ -1.48
VPS13D-210ENST00000489961 LINC00846Q9NV44 126 aa5.81□□□□□ -1.48
VPS13D-210ENST00000489961 A0A0U1RQV1 116 aa5.8□□□□□ -1.48
VPS13D-210ENST00000489961 KRTAP16-1A8MUX0 517 aa5.8□□□□□ -1.48
VPS13D-210ENST00000489961 PRR15Q8IV56 129 aa5.79□□□□□ -1.48
VPS13D-210ENST00000489961 C8orf17Q9NRJ1 99 aa5.79□□□□□ -1.48
VPS13D-210ENST00000489961 K7EQZ3 153 aa5.77□□□□□ -1.49
VPS13D-210ENST00000489961 KRTAP4-1Q9BYQ7 146 aa5.77□□□□□ -1.49
VPS13D-210ENST00000489961 RNF213Q63HN8 5207 aa5.77□□□□□ -1.49
VPS13D-210ENST00000489961 ACYP1P07311 99 aa5.75□□□□□ -1.49
VPS13D-210ENST00000489961 MMP24-AS1A0A0U1RRL7 71 aa5.73□□□□□ -1.49
VPS13D-210ENST00000489961 FAM240AA0A1B0GVK7 77 aa5.73□□□□□ -1.49
VPS13D-210ENST00000489961 hDV103S1A0JD37 113 aa5.72□□□□□ -1.49
VPS13D-210ENST00000489961 Q8N9L7 120 aa5.72□□□□□ -1.49
VPS13D-210ENST00000489961 Q8N9P0 234 aaPredicted RBP5.72□□□□□ -1.49
VPS13D-210ENST00000489961 TMEM254Q8TBM7 123 aa5.72□□□□□ -1.49
VPS13D-210ENST00000489961 MRPL34Q9BQ48 92 aaKnown RBP5.71□□□□□ -1.5
VPS13D-210ENST00000489961 CXCL6P80162 114 aa5.7□□□□□ -1.5
VPS13D-210ENST00000489961 CASC2Q6XLA1 102 aa5.68□□□□□ -1.5
VPS13D-210ENST00000489961 WFDC13Q8IUB5 93 aa5.68□□□□□ -1.5
VPS13D-210ENST00000489961 ZCCHC13Q8WW36 166 aaKnown RBP5.68□□□□□ -1.5
VPS13D-210ENST00000489961 MUC2Q02817 5179 aa5.68□□□□□ -1.5
VPS13D-210ENST00000489961 J3QR89 54 aa5.67□□□□□ -1.5
VPS13D-210ENST00000489961 NDUFS5O43920 106 aa5.67□□□□□ -1.5
VPS13D-210ENST00000489961 HCG22E2RYF7 251 aa5.66□□□□□ -1.5
VPS13D-210ENST00000489961 ATP5EP2Q5VTU8 51 aa5.65□□□□□ -1.5
VPS13D-210ENST00000489961 LINC00643Q86TS7 51 aa5.62□□□□□ -1.51
VPS13D-210ENST00000489961 COX6B2Q6YFQ2 88 aa5.61□□□□□ -1.51
VPS13D-210ENST00000489961 HIST1H4AP62805 103 aaKnown RBP5.59□□□□□ -1.51
VPS13D-210ENST00000489961 KRTAP19-2Q3LHN2 52 aa5.59□□□□□ -1.51
VPS13D-210ENST00000489961 SPINK7P58062 85 aa5.58□□□□□ -1.52
VPS13D-210ENST00000489961 LCE2CQ5TA81 110 aa5.58□□□□□ -1.52
VPS13D-210ENST00000489961 LCE2AQ5TA79 106 aaPredicted RBP5.57□□□□□ -1.52
VPS13D-210ENST00000489961 RBM12B-AS1Q9P1G2 102 aa5.56□□□□□ -1.52
VPS13D-210ENST00000489961 HRES1P13985 223 aa5.55□□□□□ -1.52
VPS13D-210ENST00000489961 TP53AIP1Q9HCN2 124 aa5.55□□□□□ -1.52
VPS13D-210ENST00000489961 FAT4Q6V0I7 4981 aa5.54□□□□□ -1.52
VPS13D-210ENST00000489961 K7ERU9 68 aa5.54□□□□□ -1.52
VPS13D-210ENST00000489961 Q5W150 140 aa5.54□□□□□ -1.52
VPS13D-210ENST00000489961 FAM236DA0A1B0GTK5 79 aa5.53□□□□□ -1.52
VPS13D-210ENST00000489961 FAM236CP0DP71 79 aa5.53□□□□□ -1.52
VPS13D-210ENST00000489961 MPLKIPQ8TAP9 179 aa5.52□□□□□ -1.53
VPS13D-210ENST00000489961 IGKV2D-30A0A075B6S6 120 aa5.51□□□□□ -1.53
VPS13D-210ENST00000489961 IGKV2-30P06310 120 aa5.51□□□□□ -1.53
VPS13D-210ENST00000489961 MT1HP80294 61 aa5.51□□□□□ -1.53
VPS13D-210ENST00000489961 C7orf65Q6ZTY9 151 aa5.51□□□□□ -1.53
VPS13D-210ENST00000489961 A0A087WVE0 104 aa5.5□□□□□ -1.53
VPS13D-210ENST00000489961 M0R2T5 61 aa5.47□□□□□ -1.53
VPS13D-210ENST00000489961 TRAV22A0A0B4J277 110 aa5.45□□□□□ -1.54
VPS13D-210ENST00000489961 UQCRQO14949 82 aa5.45□□□□□ -1.54
VPS13D-210ENST00000489961 IMUPQ9GZP8 106 aa5.43□□□□□ -1.54
VPS13D-210ENST00000489961 MT-ATP8P03928 68 aa5.41□□□□□ -1.54
VPS13D-210ENST00000489961 LOC101927531A0A1B0GV80 90 aa5.4□□□□□ -1.54
VPS13D-210ENST00000489961 H0Y9P7 68 aa5.4□□□□□ -1.54
VPS13D-210ENST00000489961 ATOX1O00244 68 aa5.4□□□□□ -1.54
VPS13D-210ENST00000489961 SCGB1A1P11684 91 aa5.4□□□□□ -1.54
VPS13D-210ENST00000489961 C4orf26Q17RF5 130 aa5.38□□□□□ -1.55
VPS13D-210ENST00000489961 OCR1Q9BZK8 76 aa5.38□□□□□ -1.55
VPS13D-210ENST00000489961 FLGP20930 4061 aaPredicted RBP5.38□□□□□ -1.55
VPS13D-210ENST00000489961 KRTAP10-6P60371 365 aaPredicted RBP5.37□□□□□ -1.55
VPS13D-210ENST00000489961 H1FX-AS1Q4G0G2 97 aa5.37□□□□□ -1.55
VPS13D-210ENST00000489961 CYP4F30PQ9H0H9 118 aa5.37□□□□□ -1.55
VPS13D-210ENST00000489961 MP68P56378 58 aa5.36□□□□□ -1.55
VPS13D-210ENST00000489961 LORP23490 312 aaPredicted RBP5.35□□□□□ -1.55
VPS13D-210ENST00000489961 C5orf47Q569G3 176 aa5.34□□□□□ -1.55
VPS13D-210ENST00000489961 C1orf64Q8NEQ6 169 aa5.34□□□□□ -1.55
VPS13D-210ENST00000489961 LINC00208Q96KT6 92 aa5.33□□□□□ -1.56
VPS13D-210ENST00000489961 FAM236AA0A1B0GUQ0 79 aa5.32□□□□□ -1.56
VPS13D-210ENST00000489961 FAM236BA0A1B0GV22 79 aa5.32□□□□□ -1.56
VPS13D-210ENST00000489961 H3BPC8 53 aa5.31□□□□□ -1.56
VPS13D-210ENST00000489961 SMIM20Q8N5G0 67 aa5.3□□□□□ -1.56
VPS13D-210ENST00000489961 KRTAP3-1Q9BYR8 98 aa5.28□□□□□ -1.56
VPS13D-210ENST00000489961 TRAV7A0A075B6U4 112 aa5.27□□□□□ -1.57
VPS13D-210ENST00000489961 KLKP1Q107X0 134 aa5.25□□□□□ -1.57
VPS13D-210ENST00000489961 KRTAP9-8Q9BYQ0 159 aa5.24□□□□□ -1.57
VPS13D-210ENST00000489961 S4R3F8 94 aa5.24□□□□□ -1.57
VPS13D-210ENST00000489961 KRTAP9-2Q9BYQ4 174 aa5.23□□□□□ -1.57
VPS13D-210ENST00000489961 LCE2DQ5TA82 110 aaPredicted RBP5.22□□□□□ -1.57
VPS13D-210ENST00000489961 A8MUN3 132 aa5.21□□□□□ -1.58
VPS13D-210ENST00000489961 MT2AP02795 61 aa5.2□□□□□ -1.58
VPS13D-210ENST00000489961 LCA10Q71F78 164 aa5.19□□□□□ -1.58
VPS13D-210ENST00000489961 SERP2Q8N6R1 65 aa5.18□□□□□ -1.58
VPS13D-210ENST00000489961 KRTAP10-10P60014 251 aa5.17□□□□□ -1.58
VPS13D-210ENST00000489961 CSAG1Q6PB30 78 aa5.17□□□□□ -1.58
VPS13D-210ENST00000489961 MT1FP04733 61 aa5.16□□□□□ -1.58
VPS13D-210ENST00000489961 SNURFQ9Y675 71 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 230.4 ms