RNA–Protein interactions for RNA: ENST00000489215.5

PTPN18-213, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 460 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-213ENST00000489215 C8orf87E5RJ46 101 aa12.49□□□□□ -0.41
PTPN18-213ENST00000489215 KRTAP16-1A8MUX0 517 aa12.46□□□□□ -0.41
PTPN18-213ENST00000489215 A0A1B0GVX0 72 aa12.45□□□□□ -0.42
PTPN18-213ENST00000489215 C9orf118A6NHY6 69 aa12.44□□□□□ -0.42
PTPN18-213ENST00000489215 NDUFB1O75438 58 aa12.43□□□□□ -0.42
PTPN18-213ENST00000489215 M0R2T5 61 aa12.42□□□□□ -0.42
PTPN18-213ENST00000489215 NOTCH2NLQ7Z3S9 236 aa12.41□□□□□ -0.42
PTPN18-213ENST00000489215 C14orf132Q9NPU4 83 aa12.39□□□□□ -0.43
PTPN18-213ENST00000489215 H3BT86 120 aa12.37□□□□□ -0.43
PTPN18-213ENST00000489215 A0A1W2PPM0 123 aa12.36□□□□□ -0.43
PTPN18-213ENST00000489215 TAX1BP3O14907 124 aa12.35□□□□□ -0.43
PTPN18-213ENST00000489215 LCE2DQ5TA82 110 aaPredicted RBP12.34□□□□□ -0.43
PTPN18-213ENST00000489215 A8MWP4 228 aa12.31□□□□□ -0.44
PTPN18-213ENST00000489215 NREPQ16612 68 aa12.31□□□□□ -0.44
PTPN18-213ENST00000489215 KRTAP10-6P60371 365 aaPredicted RBP12.29□□□□□ -0.44
PTPN18-213ENST00000489215 LORP23490 312 aaPredicted RBP12.28□□□□□ -0.44
PTPN18-213ENST00000489215 C8orf17Q9NRJ1 99 aa12.23□□□□□ -0.45
PTPN18-213ENST00000489215 Q8N9P0 234 aaPredicted RBP12.22□□□□□ -0.45
PTPN18-213ENST00000489215 RBM12B-AS1Q9P1G2 102 aa12.22□□□□□ -0.45
PTPN18-213ENST00000489215 IGKV3D-7A0A0C4DH55 119 aa12.21□□□□□ -0.45
PTPN18-213ENST00000489215 ZCCHC13Q8WW36 166 aaKnown RBP12.21□□□□□ -0.45
PTPN18-213ENST00000489215 SPCS1Q9Y6A9 102 aa12.2□□□□□ -0.46
PTPN18-213ENST00000489215 PRR15Q8IV56 129 aa12.19□□□□□ -0.46
PTPN18-213ENST00000489215 COL5A1-AS1Q5SY13 56 aa12.18□□□□□ -0.46
PTPN18-213ENST00000489215 MTURNQ8N3F0 131 aa12.18□□□□□ -0.46
PTPN18-213ENST00000489215 FAM236DA0A1B0GTK5 79 aa12.17□□□□□ -0.46
PTPN18-213ENST00000489215 FAM236CP0DP71 79 aa12.17□□□□□ -0.46
PTPN18-213ENST00000489215 Q6ZVQ6 151 aa12.15□□□□□ -0.46
PTPN18-213ENST00000489215 FLGP20930 4061 aaPredicted RBP12.15□□□□□ -0.47
PTPN18-213ENST00000489215 KRTAP9-6A0A140TA67 174 aa12.13□□□□□ -0.47
PTPN18-213ENST00000489215 HRES1P13985 223 aa12.12□□□□□ -0.47
PTPN18-213ENST00000489215 MPLKIPQ8TAP9 179 aa12.11□□□□□ -0.47
PTPN18-213ENST00000489215 BPY2O14599 106 aa12.08□□□□□ -0.48
PTPN18-213ENST00000489215 TMEM254Q8TBM7 123 aa12.08□□□□□ -0.48
PTPN18-213ENST00000489215 SPINK7P58062 85 aa12.07□□□□□ -0.48
PTPN18-213ENST00000489215 MRPL34Q9BQ48 92 aaKnown RBP12.06□□□□□ -0.48
PTPN18-213ENST00000489215 MMP24-AS1A0A0U1RRL7 71 aa12.04□□□□□ -0.48
PTPN18-213ENST00000489215 hDV103S1A0JD37 113 aa12.03□□□□□ -0.48
PTPN18-213ENST00000489215 K7EQZ3 153 aa12.02□□□□□ -0.49
PTPN18-213ENST00000489215 SMCPP49901 116 aaPredicted RBP12.01□□□□□ -0.49
PTPN18-213ENST00000489215 K7EP34 96 aa12□□□□□ -0.49
PTPN18-213ENST00000489215 GTF2H5Q6ZYL4 71 aa11.96□□□□□ -0.49
PTPN18-213ENST00000489215 PRO0461Q9UI25 63 aa11.96□□□□□ -0.49
PTPN18-213ENST00000489215 NDUFS5O43920 106 aa11.95□□□□□ -0.5
PTPN18-213ENST00000489215 UBL5Q9BZL1 73 aa11.94□□□□□ -0.5
PTPN18-213ENST00000489215 CRCT1Q9UGL9 99 aa11.93□□□□□ -0.5
PTPN18-213ENST00000489215 KRTAP9-8Q9BYQ0 159 aa11.88□□□□□ -0.51
PTPN18-213ENST00000489215 F8W1H4 67 aa11.87□□□□□ -0.51
PTPN18-213ENST00000489215 WFDC13Q8IUB5 93 aa11.87□□□□□ -0.51
PTPN18-213ENST00000489215 CASC2Q6XLA1 102 aa11.86□□□□□ -0.51
PTPN18-213ENST00000489215 LINC00846Q9NV44 126 aa11.86□□□□□ -0.51
PTPN18-213ENST00000489215 PCP4L1A6NKN8 68 aa11.85□□□□□ -0.51
PTPN18-213ENST00000489215 Q8N9L7 120 aa11.82□□□□□ -0.52
PTPN18-213ENST00000489215 FSIP2Q5CZC0 6907 aa11.79□□□□□ -0.52
PTPN18-213ENST00000489215 HCG22E2RYF7 251 aa11.77□□□□□ -0.53
PTPN18-213ENST00000489215 CXCL6P80162 114 aa11.76□□□□□ -0.53
PTPN18-213ENST00000489215 C7orf65Q6ZTY9 151 aa11.75□□□□□ -0.53
PTPN18-213ENST00000489215 ETDBQ3ZM63 59 aa11.72□□□□□ -0.53
PTPN18-213ENST00000489215 Q5W150 140 aa11.72□□□□□ -0.53
PTPN18-213ENST00000489215 IGKV2D-30A0A075B6S6 120 aa11.71□□□□□ -0.53
PTPN18-213ENST00000489215 MT2AP02795 61 aa11.71□□□□□ -0.53
PTPN18-213ENST00000489215 IGKV2-30P06310 120 aa11.71□□□□□ -0.53
PTPN18-213ENST00000489215 H1FX-AS1Q4G0G2 97 aa11.67□□□□□ -0.54
PTPN18-213ENST00000489215 KRTAP10-10P60014 251 aa11.64□□□□□ -0.55
PTPN18-213ENST00000489215 MT1FP04733 61 aa11.6□□□□□ -0.55
PTPN18-213ENST00000489215 TP53AIP1Q9HCN2 124 aa11.6□□□□□ -0.55
PTPN18-213ENST00000489215 ACYP1P07311 99 aa11.59□□□□□ -0.55
PTPN18-213ENST00000489215 KRTAP9-3Q9BYQ3 159 aa11.51□□□□□ -0.57
PTPN18-213ENST00000489215 C4orf26Q17RF5 130 aa11.49□□□□□ -0.57
PTPN18-213ENST00000489215 FAM240AA0A1B0GVK7 77 aa11.48□□□□□ -0.57
PTPN18-213ENST00000489215 ATP5EP2Q5VTU8 51 aa11.44□□□□□ -0.58
PTPN18-213ENST00000489215 LCE2BO14633 110 aa11.39□□□□□ -0.59
PTPN18-213ENST00000489215 C1orf64Q8NEQ6 169 aa11.34□□□□□ -0.59
PTPN18-213ENST00000489215 HIST1H4AP62805 103 aaKnown RBP11.31□□□□□ -0.6
PTPN18-213ENST00000489215 TRAV22A0A0B4J277 110 aa11.3□□□□□ -0.6
PTPN18-213ENST00000489215 USH2AO75445 5202 aa11.3□□□□□ -0.6
PTPN18-213ENST00000489215 LOC101927531A0A1B0GV80 90 aa11.26□□□□□ -0.61
PTPN18-213ENST00000489215 LINC00643Q86TS7 51 aa11.26□□□□□ -0.61
PTPN18-213ENST00000489215 KRTAP3-1Q9BYR8 98 aa11.26□□□□□ -0.61
PTPN18-213ENST00000489215 CYP4F30PQ9H0H9 118 aa11.26□□□□□ -0.61
PTPN18-213ENST00000489215 S4R3F8 94 aa11.26□□□□□ -0.61
PTPN18-213ENST00000489215 UQCRQO14949 82 aa11.23□□□□□ -0.61
PTPN18-213ENST00000489215 C5orf47Q569G3 176 aa11.22□□□□□ -0.61
PTPN18-213ENST00000489215 CSAG1Q6PB30 78 aa11.22□□□□□ -0.61
PTPN18-213ENST00000489215 ATOX1O00244 68 aa11.2□□□□□ -0.62
PTPN18-213ENST00000489215 A0A1B0GV90 55 aa11.18□□□□□ -0.62
PTPN18-213ENST00000489215 KRTAP19-1Q8IUB9 90 aa11.18□□□□□ -0.62
PTPN18-213ENST00000489215 SSPOA2VEC9 5147 aa11.17□□□□□ -0.62
PTPN18-213ENST00000489215 LCA10Q71F78 164 aa11.14□□□□□ -0.63
PTPN18-213ENST00000489215 H0Y9P7 68 aa11.11□□□□□ -0.63
PTPN18-213ENST00000489215 J3QR89 54 aa11.11□□□□□ -0.63
PTPN18-213ENST00000489215 FAM236AA0A1B0GUQ0 79 aa11.1□□□□□ -0.63
PTPN18-213ENST00000489215 FAM236BA0A1B0GV22 79 aa11.1□□□□□ -0.63
PTPN18-213ENST00000489215 A0A087WVE0 104 aa11.08□□□□□ -0.64
PTPN18-213ENST00000489215 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.07□□□□□ -0.64
PTPN18-213ENST00000489215 KRTAP19-6Q3LI70 58 aa11.05□□□□□ -0.64
PTPN18-213ENST00000489215 MP68P56378 58 aa10.98□□□□□ -0.65
PTPN18-213ENST00000489215 KRTAP3-3Q9BYR6 98 aa10.96□□□□□ -0.65
PTPN18-213ENST00000489215 A8MUN3 132 aa10.95□□□□□ -0.66
PTPN18-213ENST00000489215 LINC00208Q96KT6 92 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms