RNA–Protein interactions for RNA: ENST00000485921.5

ABCF3-216, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-216ENST00000485921 IGHV6-1A0A0B4J1U7 121 aa12.72□□□□□ -0.37
ABCF3-216ENST00000485921 LINC00313P59037 77 aa12.72□□□□□ -0.37
ABCF3-216ENST00000485921 A0A1B0GVX0 72 aa12.7□□□□□ -0.38
ABCF3-216ENST00000485921 PCOTHQ58A44 107 aa12.69□□□□□ -0.38
ABCF3-216ENST00000485921 NOTCH2NLQ7Z3S9 236 aa12.68□□□□□ -0.38
ABCF3-216ENST00000485921 NDUFB1O75438 58 aa12.67□□□□□ -0.38
ABCF3-216ENST00000485921 Q75L30 129 aa12.67□□□□□ -0.38
ABCF3-216ENST00000485921 MUC2Q02817 5179 aa12.67□□□□□ -0.38
ABCF3-216ENST00000485921 A8MWP4 228 aa12.66□□□□□ -0.38
ABCF3-216ENST00000485921 C8orf87E5RJ46 101 aa12.64□□□□□ -0.39
ABCF3-216ENST00000485921 Q6ZVQ6 151 aa12.64□□□□□ -0.39
ABCF3-216ENST00000485921 C20orf166-AS1Q96NR2 134 aa12.64□□□□□ -0.39
ABCF3-216ENST00000485921 IGKV3D-7A0A0C4DH55 119 aa12.62□□□□□ -0.39
ABCF3-216ENST00000485921 KRTAP16-1A8MUX0 517 aa12.62□□□□□ -0.39
ABCF3-216ENST00000485921 LINC00846Q9NV44 126 aa12.62□□□□□ -0.39
ABCF3-216ENST00000485921 A8MUU9 505 aa12.61□□□□□ -0.39
ABCF3-216ENST00000485921 KRTAP4-1Q9BYQ7 146 aa12.61□□□□□ -0.39
ABCF3-216ENST00000485921 BPY2O14599 106 aa12.59□□□□□ -0.39
ABCF3-216ENST00000485921 UBL5Q9BZL1 73 aa12.58□□□□□ -0.4
ABCF3-216ENST00000485921 ATP11AUNQ6ZP68 121 aa12.57□□□□□ -0.4
ABCF3-216ENST00000485921 PRR15Q8IV56 129 aa12.57□□□□□ -0.4
ABCF3-216ENST00000485921 C8orf17Q9NRJ1 99 aa12.55□□□□□ -0.4
ABCF3-216ENST00000485921 K7EQZ3 153 aa12.51□□□□□ -0.41
ABCF3-216ENST00000485921 A0A0U1RQV1 116 aa12.46□□□□□ -0.41
ABCF3-216ENST00000485921 MMP24-AS1A0A0U1RRL7 71 aa12.44□□□□□ -0.42
ABCF3-216ENST00000485921 Q8N9L7 120 aa12.44□□□□□ -0.42
ABCF3-216ENST00000485921 ACYP1P07311 99 aa12.43□□□□□ -0.42
ABCF3-216ENST00000485921 FAM240AA0A1B0GVK7 77 aa12.4□□□□□ -0.42
ABCF3-216ENST00000485921 Q8N9P0 234 aaPredicted RBP12.4□□□□□ -0.42
ABCF3-216ENST00000485921 TMEM254Q8TBM7 123 aa12.38□□□□□ -0.43
ABCF3-216ENST00000485921 hDV103S1A0JD37 113 aa12.37□□□□□ -0.43
ABCF3-216ENST00000485921 MRPL34Q9BQ48 92 aaKnown RBP12.36□□□□□ -0.43
ABCF3-216ENST00000485921 FAT4Q6V0I7 4981 aa12.35□□□□□ -0.43
ABCF3-216ENST00000485921 CXCL6P80162 114 aa12.34□□□□□ -0.43
ABCF3-216ENST00000485921 WFDC13Q8IUB5 93 aa12.31□□□□□ -0.44
ABCF3-216ENST00000485921 ZCCHC13Q8WW36 166 aaKnown RBP12.31□□□□□ -0.44
ABCF3-216ENST00000485921 CASC2Q6XLA1 102 aa12.3□□□□□ -0.44
ABCF3-216ENST00000485921 HCG22E2RYF7 251 aa12.25□□□□□ -0.45
ABCF3-216ENST00000485921 NDUFS5O43920 106 aa12.25□□□□□ -0.45
ABCF3-216ENST00000485921 J3QR89 54 aa12.22□□□□□ -0.45
ABCF3-216ENST00000485921 KRTAP19-2Q3LHN2 52 aa12.22□□□□□ -0.45
ABCF3-216ENST00000485921 ATP5EP2Q5VTU8 51 aa12.21□□□□□ -0.45
ABCF3-216ENST00000485921 LCE2CQ5TA81 110 aa12.17□□□□□ -0.46
ABCF3-216ENST00000485921 LINC00643Q86TS7 51 aa12.17□□□□□ -0.46
ABCF3-216ENST00000485921 LCE2AQ5TA79 106 aaPredicted RBP12.12□□□□□ -0.47
ABCF3-216ENST00000485921 SPINK7P58062 85 aa12.11□□□□□ -0.47
ABCF3-216ENST00000485921 COX6B2Q6YFQ2 88 aa12.11□□□□□ -0.47
ABCF3-216ENST00000485921 HIST1H4AP62805 103 aaKnown RBP12.09□□□□□ -0.47
ABCF3-216ENST00000485921 Q5W150 140 aa12.07□□□□□ -0.48
ABCF3-216ENST00000485921 HRES1P13985 223 aa12.06□□□□□ -0.48
ABCF3-216ENST00000485921 MT1HP80294 61 aa11.99□□□□□ -0.49
ABCF3-216ENST00000485921 MPLKIPQ8TAP9 179 aa11.99□□□□□ -0.49
ABCF3-216ENST00000485921 TP53AIP1Q9HCN2 124 aa11.99□□□□□ -0.49
ABCF3-216ENST00000485921 RBM12B-AS1Q9P1G2 102 aa11.99□□□□□ -0.49
ABCF3-216ENST00000485921 K7ERU9 68 aa11.98□□□□□ -0.49
ABCF3-216ENST00000485921 A0A087WVE0 104 aa11.96□□□□□ -0.49
ABCF3-216ENST00000485921 IGKV2D-30A0A075B6S6 120 aa11.94□□□□□ -0.5
ABCF3-216ENST00000485921 FAM236DA0A1B0GTK5 79 aa11.94□□□□□ -0.5
ABCF3-216ENST00000485921 IGKV2-30P06310 120 aa11.94□□□□□ -0.5
ABCF3-216ENST00000485921 FAM236CP0DP71 79 aa11.94□□□□□ -0.5
ABCF3-216ENST00000485921 FLGP20930 4061 aaPredicted RBP11.93□□□□□ -0.5
ABCF3-216ENST00000485921 C7orf65Q6ZTY9 151 aa11.91□□□□□ -0.5
ABCF3-216ENST00000485921 M0R2T5 61 aa11.83□□□□□ -0.52
ABCF3-216ENST00000485921 UQCRQO14949 82 aa11.79□□□□□ -0.52
ABCF3-216ENST00000485921 TRAV22A0A0B4J277 110 aa11.77□□□□□ -0.53
ABCF3-216ENST00000485921 MT-ATP8P03928 68 aa11.76□□□□□ -0.53
ABCF3-216ENST00000485921 IMUPQ9GZP8 106 aa11.73□□□□□ -0.53
ABCF3-216ENST00000485921 H0Y9P7 68 aa11.69□□□□□ -0.54
ABCF3-216ENST00000485921 OCR1Q9BZK8 76 aa11.69□□□□□ -0.54
ABCF3-216ENST00000485921 KRTAP10-6P60371 365 aaPredicted RBP11.68□□□□□ -0.54
ABCF3-216ENST00000485921 C4orf26Q17RF5 130 aa11.68□□□□□ -0.54
ABCF3-216ENST00000485921 CYP4F30PQ9H0H9 118 aa11.67□□□□□ -0.54
ABCF3-216ENST00000485921 LOC101927531A0A1B0GV80 90 aa11.66□□□□□ -0.54
ABCF3-216ENST00000485921 ATOX1O00244 68 aa11.66□□□□□ -0.54
ABCF3-216ENST00000485921 SCGB1A1P11684 91 aa11.66□□□□□ -0.54
ABCF3-216ENST00000485921 LORP23490 312 aaPredicted RBP11.64□□□□□ -0.55
ABCF3-216ENST00000485921 H1FX-AS1Q4G0G2 97 aa11.62□□□□□ -0.55
ABCF3-216ENST00000485921 MP68P56378 58 aa11.57□□□□□ -0.56
ABCF3-216ENST00000485921 C1orf64Q8NEQ6 169 aa11.57□□□□□ -0.56
ABCF3-216ENST00000485921 C5orf47Q569G3 176 aa11.55□□□□□ -0.56
ABCF3-216ENST00000485921 LINC00208Q96KT6 92 aa11.55□□□□□ -0.56
ABCF3-216ENST00000485921 FAM236AA0A1B0GUQ0 79 aa11.53□□□□□ -0.56
ABCF3-216ENST00000485921 FAM236BA0A1B0GV22 79 aa11.53□□□□□ -0.56
ABCF3-216ENST00000485921 KRTAP3-1Q9BYR8 98 aa11.52□□□□□ -0.57
ABCF3-216ENST00000485921 H3BPC8 53 aa11.45□□□□□ -0.58
ABCF3-216ENST00000485921 SMIM20Q8N5G0 67 aa11.44□□□□□ -0.58
ABCF3-216ENST00000485921 KRTAP9-8Q9BYQ0 159 aa11.42□□□□□ -0.58
ABCF3-216ENST00000485921 TRAV7A0A075B6U4 112 aa11.41□□□□□ -0.58
ABCF3-216ENST00000485921 KLKP1Q107X0 134 aa11.41□□□□□ -0.58
ABCF3-216ENST00000485921 KRTAP9-2Q9BYQ4 174 aa11.37□□□□□ -0.59
ABCF3-216ENST00000485921 S4R3F8 94 aa11.34□□□□□ -0.59
ABCF3-216ENST00000485921 LCE2DQ5TA82 110 aaPredicted RBP11.33□□□□□ -0.6
ABCF3-216ENST00000485921 MT2AP02795 61 aa11.31□□□□□ -0.6
ABCF3-216ENST00000485921 LCA10Q71F78 164 aa11.27□□□□□ -0.61
ABCF3-216ENST00000485921 A8MUN3 132 aa11.23□□□□□ -0.61
ABCF3-216ENST00000485921 MT1FP04733 61 aa11.23□□□□□ -0.61
ABCF3-216ENST00000485921 KRTAP10-10P60014 251 aa11.21□□□□□ -0.61
ABCF3-216ENST00000485921 SERP2Q8N6R1 65 aa11.21□□□□□ -0.61
ABCF3-216ENST00000485921 CSAG1Q6PB30 78 aa11.2□□□□□ -0.62
ABCF3-216ENST00000485921 KRTAP3-3Q9BYR6 98 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms