RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 LINC00472Q9H8W2 130 aa6.84□□□□□ -1.31
HDAC6-224ENST00000481929 TRBV7-4A0A0J9YYF1 115 aa6.83□□□□□ -1.32
HDAC6-224ENST00000481929 MT1BP07438 61 aa6.83□□□□□ -1.32
HDAC6-224ENST00000481929 RAB37Q96AX2 223 aa6.83□□□□□ -1.32
HDAC6-224ENST00000481929 UQCR10Q9UDW1 63 aa6.83□□□□□ -1.32
HDAC6-224ENST00000481929 DLEU1O43261 78 aa6.82□□□□□ -1.32
HDAC6-224ENST00000481929 FABP2P12104 132 aa6.82□□□□□ -1.32
HDAC6-224ENST00000481929 Q5VV11 94 aa6.82□□□□□ -1.32
HDAC6-224ENST00000481929 A0A1B0GVX0 72 aa6.81□□□□□ -1.32
HDAC6-224ENST00000481929 KRTAP10-5P60370 271 aa6.81□□□□□ -1.32
HDAC6-224ENST00000481929 H1FX-AS1Q4G0G2 97 aa6.81□□□□□ -1.32
HDAC6-224ENST00000481929 C2orf91Q6ZV80 131 aa6.81□□□□□ -1.32
HDAC6-224ENST00000481929 ANKRD29Q8N6D5 301 aa6.78□□□□□ -1.32
HDAC6-224ENST00000481929 H0YGX0 51 aa6.77□□□□□ -1.33
HDAC6-224ENST00000481929 LYRM7Q5U5X0 104 aa6.76□□□□□ -1.33
HDAC6-224ENST00000481929 HIGD1BQ9P298 99 aa6.75□□□□□ -1.33
HDAC6-224ENST00000481929 TRACP01848 142 aa6.74□□□□□ -1.33
HDAC6-224ENST00000481929 FAM236AA0A1B0GUQ0 79 aa6.72□□□□□ -1.33
HDAC6-224ENST00000481929 FAM236BA0A1B0GV22 79 aa6.72□□□□□ -1.33
HDAC6-224ENST00000481929 A0A1B0GV72 72 aa6.72□□□□□ -1.33
HDAC6-224ENST00000481929 SPRR2EP22531 72 aa6.72□□□□□ -1.33
HDAC6-224ENST00000481929 SPRR2BP35325 72 aa6.72□□□□□ -1.33
HDAC6-224ENST00000481929 SPRR2AP35326 72 aa6.72□□□□□ -1.33
HDAC6-224ENST00000481929 KRTAP19-8Q3LI54 63 aa6.72□□□□□ -1.33
HDAC6-224ENST00000481929 DSCR8Q96T75 97 aa6.72□□□□□ -1.33
HDAC6-224ENST00000481929 KRTAP2-2Q9BYT5 123 aa6.72□□□□□ -1.33
HDAC6-224ENST00000481929 KRTAP2-1Q9BYU5 128 aa6.72□□□□□ -1.33
HDAC6-224ENST00000481929 A0A1B0GX51 115 aa6.71□□□□□ -1.34
HDAC6-224ENST00000481929 CCKP06307 115 aa6.71□□□□□ -1.34
HDAC6-224ENST00000481929 HSD52Q0P140 79 aa6.7□□□□□ -1.34
HDAC6-224ENST00000481929 HIST1H4GQ99525 98 aa6.7□□□□□ -1.34
HDAC6-224ENST00000481929 M0R143 59 aa6.68□□□□□ -1.34
HDAC6-224ENST00000481929 IGKV3D-7A0A0C4DH55 119 aa6.67□□□□□ -1.34
HDAC6-224ENST00000481929 FXYD2P54710 66 aa6.67□□□□□ -1.34
HDAC6-224ENST00000481929 CEND1Q8N111 149 aa6.67□□□□□ -1.34
HDAC6-224ENST00000481929 BATFQ16520 125 aa6.66□□□□□ -1.34
HDAC6-224ENST00000481929 SPRR2FQ96RM1 72 aa6.66□□□□□ -1.34
HDAC6-224ENST00000481929 SPRR2GQ9BYE4 73 aa6.66□□□□□ -1.34
HDAC6-224ENST00000481929 J3KT08 172 aa6.65□□□□□ -1.34
HDAC6-224ENST00000481929 NDUFB1O75438 58 aa6.63□□□□□ -1.35
HDAC6-224ENST00000481929 VPS25Q9BRG1 176 aa6.62□□□□□ -1.35
HDAC6-224ENST00000481929 IMUPQ9GZP8 106 aa6.62□□□□□ -1.35
HDAC6-224ENST00000481929 C8orf17Q9NRJ1 99 aa6.61□□□□□ -1.35
HDAC6-224ENST00000481929 ORMDL1Q9P0S3 153 aa6.61□□□□□ -1.35
HDAC6-224ENST00000481929 A0A0B4J2C4 111 aa6.6□□□□□ -1.35
HDAC6-224ENST00000481929 H3BQ85 93 aa6.6□□□□□ -1.35
HDAC6-224ENST00000481929 DNAL4O96015 105 aa6.6□□□□□ -1.35
HDAC6-224ENST00000481929 COL5A1-AS1Q5SY13 56 aa6.6□□□□□ -1.35
HDAC6-224ENST00000481929 K7ERJ3 54 aa6.59□□□□□ -1.35
HDAC6-224ENST00000481929 TAX1BP3O14907 124 aa6.59□□□□□ -1.35
HDAC6-224ENST00000481929 C5orf47Q569G3 176 aa6.58□□□□□ -1.36
HDAC6-224ENST00000481929 TMEM256-PLSCR3K7ERE1 68 aa6.57□□□□□ -1.36
HDAC6-224ENST00000481929 TMEM238LA0A1B0GVL6 79 aa6.56□□□□□ -1.36
HDAC6-224ENST00000481929 A6NJY4 79 aa6.56□□□□□ -1.36
HDAC6-224ENST00000481929 Q6ZVQ6 151 aa6.56□□□□□ -1.36
HDAC6-224ENST00000481929 A0A1B0GV90 55 aa6.53□□□□□ -1.36
HDAC6-224ENST00000481929 TRIAP1O43715 76 aa6.53□□□□□ -1.36
HDAC6-224ENST00000481929 C21orf62-AS1Q17RA5 79 aa6.53□□□□□ -1.36
HDAC6-224ENST00000481929 NAA38Q9BRA0 125 aaKnown RBP6.53□□□□□ -1.36
HDAC6-224ENST00000481929 IGKV2D-30A0A075B6S6 120 aa6.52□□□□□ -1.37
HDAC6-224ENST00000481929 C9orf118A6NHY6 69 aa6.52□□□□□ -1.37
HDAC6-224ENST00000481929 IGKV2-30P06310 120 aa6.52□□□□□ -1.37
HDAC6-224ENST00000481929 LCE1AQ5T7P2 110 aa6.52□□□□□ -1.37
HDAC6-224ENST00000481929 PRO1854Q9UHT4 67 aa6.52□□□□□ -1.37
HDAC6-224ENST00000481929 SPRR2DP22532 72 aa6.5□□□□□ -1.37
HDAC6-224ENST00000481929 UBE2V1Q13404 147 aa6.5□□□□□ -1.37
HDAC6-224ENST00000481929 C7orf65Q6ZTY9 151 aa6.49□□□□□ -1.37
HDAC6-224ENST00000481929 GPR98Q8WXG9 6306 aa6.48□□□□□ -1.37
HDAC6-224ENST00000481929 RBM3P98179 157 aaKnown RBP6.48□□□□□ -1.37
HDAC6-224ENST00000481929 Q6ZQT0 140 aa6.48□□□□□ -1.37
HDAC6-224ENST00000481929 A0A1W2PPM0 123 aa6.47□□□□□ -1.37
HDAC6-224ENST00000481929 KLKP1Q107X0 134 aa6.47□□□□□ -1.37
HDAC6-224ENST00000481929 SMCPP49901 116 aaPredicted RBP6.46□□□□□ -1.38
HDAC6-224ENST00000481929 MRPL34Q9BQ48 92 aaKnown RBP6.46□□□□□ -1.38
HDAC6-224ENST00000481929 C4orf26Q17RF5 130 aa6.45□□□□□ -1.38
HDAC6-224ENST00000481929 CSAG1Q6PB30 78 aa6.45□□□□□ -1.38
HDAC6-224ENST00000481929 KRTAP8-1Q8IUC2 63 aa6.45□□□□□ -1.38
HDAC6-224ENST00000481929 TMEM254Q8TBM7 123 aa6.45□□□□□ -1.38
HDAC6-224ENST00000481929 NDUFS5O43920 106 aa6.44□□□□□ -1.38
HDAC6-224ENST00000481929 S4R3F8 94 aa6.43□□□□□ -1.38
HDAC6-224ENST00000481929 C9JAW5 83 aa6.42□□□□□ -1.38
HDAC6-224ENST00000481929 PSMB2P49721 201 aa6.42□□□□□ -1.38
HDAC6-224ENST00000481929 PRR15Q8IV56 129 aa6.42□□□□□ -1.38
HDAC6-224ENST00000481929 MMP24-AS1A0A0U1RRL7 71 aa6.41□□□□□ -1.38
HDAC6-224ENST00000481929 K7EP34 96 aa6.41□□□□□ -1.38
HDAC6-224ENST00000481929 SPCS1Q9Y6A9 102 aa6.41□□□□□ -1.38
HDAC6-224ENST00000481929 SCGB1C2P0DMR2 95 aa6.39□□□□□ -1.39
HDAC6-224ENST00000481929 COX6CP09669 75 aa6.38□□□□□ -1.39
HDAC6-224ENST00000481929 LCE3BQ5TA77 95 aa6.37□□□□□ -1.39
HDAC6-224ENST00000481929 hDV103S1A0JD37 113 aa6.36□□□□□ -1.39
HDAC6-224ENST00000481929 Q5W150 140 aa6.36□□□□□ -1.39
HDAC6-224ENST00000481929 GTF2H5Q6ZYL4 71 aa6.36□□□□□ -1.39
HDAC6-224ENST00000481929 LCA10Q71F78 164 aa6.35□□□□□ -1.39
HDAC6-224ENST00000481929 PRO2289Q9P1D8 64 aa6.35□□□□□ -1.39
HDAC6-224ENST00000481929 CRIPTQ9P021 101 aa6.34□□□□□ -1.39
HDAC6-224ENST00000481929 PRO0461Q9UI25 63 aa6.34□□□□□ -1.39
HDAC6-224ENST00000481929 ATXN8Q156A1 80 aa6.33□□□□□ -1.4
HDAC6-224ENST00000481929 A0A1B0GW54 56 aa6.32□□□□□ -1.4
HDAC6-224ENST00000481929 KRTAP3-1Q9BYR8 98 aa6.31□□□□□ -1.4
HDAC6-224ENST00000481929 F8W1H4 67 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms