RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 A0A1B0GV90 55 aa10.78□□□□□ -0.68
SF1-213ENST00000472725 Q75L30 129 aa10.78□□□□□ -0.68
SF1-213ENST00000472725 A8MWP4 228 aa10.77□□□□□ -0.69
SF1-213ENST00000472725 IGHV6-1A0A0B4J1U7 121 aa10.75□□□□□ -0.69
SF1-213ENST00000472725 DSCR10P59022 87 aa10.75□□□□□ -0.69
SF1-213ENST00000472725 C20orf166-AS1Q96NR2 134 aa10.74□□□□□ -0.69
SF1-213ENST00000472725 Q6ZVQ6 151 aa10.73□□□□□ -0.69
SF1-213ENST00000472725 UBL5Q9BZL1 73 aa10.72□□□□□ -0.69
SF1-213ENST00000472725 A8MUU9 505 aa10.71□□□□□ -0.69
SF1-213ENST00000472725 BPY2O14599 106 aa10.7□□□□□ -0.7
SF1-213ENST00000472725 LINC00846Q9NV44 126 aa10.7□□□□□ -0.7
SF1-213ENST00000472725 KRTAP16-1A8MUX0 517 aa10.69□□□□□ -0.7
SF1-213ENST00000472725 PCOTHQ58A44 107 aa10.69□□□□□ -0.7
SF1-213ENST00000472725 PRR15Q8IV56 129 aa10.69□□□□□ -0.7
SF1-213ENST00000472725 MUC17Q685J3 4493 aa10.69□□□□□ -0.7
SF1-213ENST00000472725 IGKV3D-7A0A0C4DH55 119 aa10.68□□□□□ -0.7
SF1-213ENST00000472725 NOTCH2NLQ7Z3S9 236 aa10.68□□□□□ -0.7
SF1-213ENST00000472725 ATP11AUNQ6ZP68 121 aa10.67□□□□□ -0.7
SF1-213ENST00000472725 ACYP1P07311 99 aa10.66□□□□□ -0.7
SF1-213ENST00000472725 C8orf17Q9NRJ1 99 aa10.64□□□□□ -0.71
SF1-213ENST00000472725 FAM240AA0A1B0GVK7 77 aa10.63□□□□□ -0.71
SF1-213ENST00000472725 A0A0U1RQV1 116 aa10.62□□□□□ -0.71
SF1-213ENST00000472725 RNF213Q63HN8 5207 aa10.61□□□□□ -0.71
SF1-213ENST00000472725 K7EQZ3 153 aa10.59□□□□□ -0.71
SF1-213ENST00000472725 KRTAP4-1Q9BYQ7 146 aa10.58□□□□□ -0.72
SF1-213ENST00000472725 Q8N9P0 234 aaPredicted RBP10.56□□□□□ -0.72
SF1-213ENST00000472725 MMP24-AS1A0A0U1RRL7 71 aa10.55□□□□□ -0.72
SF1-213ENST00000472725 CXCL6P80162 114 aa10.55□□□□□ -0.72
SF1-213ENST00000472725 TMEM254Q8TBM7 123 aa10.54□□□□□ -0.72
SF1-213ENST00000472725 hDV103S1A0JD37 113 aa10.51□□□□□ -0.73
SF1-213ENST00000472725 MUC2Q02817 5179 aa10.5□□□□□ -0.73
SF1-213ENST00000472725 MRPL34Q9BQ48 92 aaKnown RBP10.5□□□□□ -0.73
SF1-213ENST00000472725 J3QR89 54 aa10.48□□□□□ -0.73
SF1-213ENST00000472725 Q8N9L7 120 aa10.48□□□□□ -0.73
SF1-213ENST00000472725 ATP5EP2Q5VTU8 51 aa10.46□□□□□ -0.73
SF1-213ENST00000472725 CASC2Q6XLA1 102 aa10.44□□□□□ -0.74
SF1-213ENST00000472725 ZCCHC13Q8WW36 166 aaKnown RBP10.44□□□□□ -0.74
SF1-213ENST00000472725 HCG22E2RYF7 251 aa10.41□□□□□ -0.74
SF1-213ENST00000472725 LINC00643Q86TS7 51 aa10.39□□□□□ -0.75
SF1-213ENST00000472725 WFDC13Q8IUB5 93 aa10.39□□□□□ -0.75
SF1-213ENST00000472725 NDUFS5O43920 106 aa10.36□□□□□ -0.75
SF1-213ENST00000472725 KRTAP19-2Q3LHN2 52 aa10.3□□□□□ -0.76
SF1-213ENST00000472725 K7ERU9 68 aa10.26□□□□□ -0.77
SF1-213ENST00000472725 TP53AIP1Q9HCN2 124 aa10.26□□□□□ -0.77
SF1-213ENST00000472725 SPINK7P58062 85 aa10.25□□□□□ -0.77
SF1-213ENST00000472725 HIST1H4AP62805 103 aaKnown RBP10.25□□□□□ -0.77
SF1-213ENST00000472725 LCE2CQ5TA81 110 aa10.25□□□□□ -0.77
SF1-213ENST00000472725 LCE2AQ5TA79 106 aaPredicted RBP10.24□□□□□ -0.77
SF1-213ENST00000472725 COX6B2Q6YFQ2 88 aa10.23□□□□□ -0.77
SF1-213ENST00000472725 HRES1P13985 223 aa10.2□□□□□ -0.78
SF1-213ENST00000472725 Q5W150 140 aa10.2□□□□□ -0.78
SF1-213ENST00000472725 FAT4Q6V0I7 4981 aa10.2□□□□□ -0.78
SF1-213ENST00000472725 MPLKIPQ8TAP9 179 aa10.19□□□□□ -0.78
SF1-213ENST00000472725 RBM12B-AS1Q9P1G2 102 aa10.19□□□□□ -0.78
SF1-213ENST00000472725 C7orf65Q6ZTY9 151 aa10.13□□□□□ -0.79
SF1-213ENST00000472725 A0A087WVE0 104 aa10.11□□□□□ -0.79
SF1-213ENST00000472725 MT1HP80294 61 aa10.1□□□□□ -0.79
SF1-213ENST00000472725 FAM236DA0A1B0GTK5 79 aa10.09□□□□□ -0.79
SF1-213ENST00000472725 FAM236CP0DP71 79 aa10.09□□□□□ -0.79
SF1-213ENST00000472725 IGKV2D-30A0A075B6S6 120 aa10.08□□□□□ -0.8
SF1-213ENST00000472725 IGKV2-30P06310 120 aa10.08□□□□□ -0.8
SF1-213ENST00000472725 IMUPQ9GZP8 106 aa10.08□□□□□ -0.8
SF1-213ENST00000472725 UQCRQO14949 82 aa10.06□□□□□ -0.8
SF1-213ENST00000472725 TRAV22A0A0B4J277 110 aa10.03□□□□□ -0.8
SF1-213ENST00000472725 ATOX1O00244 68 aa9.98□□□□□ -0.81
SF1-213ENST00000472725 M0R2T5 61 aa9.96□□□□□ -0.82
SF1-213ENST00000472725 MT-ATP8P03928 68 aa9.96□□□□□ -0.82
SF1-213ENST00000472725 LOC101927531A0A1B0GV80 90 aa9.95□□□□□ -0.82
SF1-213ENST00000472725 OCR1Q9BZK8 76 aa9.95□□□□□ -0.82
SF1-213ENST00000472725 SCGB1A1P11684 91 aa9.92□□□□□ -0.82
SF1-213ENST00000472725 FLGP20930 4061 aaPredicted RBP9.92□□□□□ -0.82
SF1-213ENST00000472725 H0Y9P7 68 aa9.91□□□□□ -0.82
SF1-213ENST00000472725 CYP4F30PQ9H0H9 118 aa9.91□□□□□ -0.82
SF1-213ENST00000472725 C5orf47Q569G3 176 aa9.88□□□□□ -0.83
SF1-213ENST00000472725 H1FX-AS1Q4G0G2 97 aa9.87□□□□□ -0.83
SF1-213ENST00000472725 MP68P56378 58 aa9.86□□□□□ -0.83
SF1-213ENST00000472725 C4orf26Q17RF5 130 aa9.86□□□□□ -0.83
SF1-213ENST00000472725 KRTAP10-6P60371 365 aaPredicted RBP9.85□□□□□ -0.83
SF1-213ENST00000472725 H3BPC8 53 aa9.83□□□□□ -0.84
SF1-213ENST00000472725 LORP23490 312 aaPredicted RBP9.83□□□□□ -0.84
SF1-213ENST00000472725 SMIM20Q8N5G0 67 aa9.83□□□□□ -0.84
SF1-213ENST00000472725 C1orf64Q8NEQ6 169 aa9.82□□□□□ -0.84
SF1-213ENST00000472725 FAM236AA0A1B0GUQ0 79 aa9.8□□□□□ -0.84
SF1-213ENST00000472725 FAM236BA0A1B0GV22 79 aa9.8□□□□□ -0.84
SF1-213ENST00000472725 LINC00208Q96KT6 92 aa9.79□□□□□ -0.84
SF1-213ENST00000472725 TRAV7A0A075B6U4 112 aa9.73□□□□□ -0.85
SF1-213ENST00000472725 KRTAP3-1Q9BYR8 98 aa9.72□□□□□ -0.85
SF1-213ENST00000472725 KLKP1Q107X0 134 aa9.64□□□□□ -0.87
SF1-213ENST00000472725 KRTAP9-8Q9BYQ0 159 aa9.64□□□□□ -0.87
SF1-213ENST00000472725 A8MUN3 132 aa9.63□□□□□ -0.87
SF1-213ENST00000472725 S4R3F8 94 aa9.62□□□□□ -0.87
SF1-213ENST00000472725 LCE2DQ5TA82 110 aaPredicted RBP9.6□□□□□ -0.87
SF1-213ENST00000472725 SERP2Q8N6R1 65 aa9.57□□□□□ -0.88
SF1-213ENST00000472725 KRTAP9-2Q9BYQ4 174 aa9.55□□□□□ -0.88
SF1-213ENST00000472725 MT2AP02795 61 aa9.53□□□□□ -0.88
SF1-213ENST00000472725 LCA10Q71F78 164 aa9.53□□□□□ -0.88
SF1-213ENST00000472725 CSAG1Q6PB30 78 aa9.52□□□□□ -0.89
SF1-213ENST00000472725 KRTAP10-10P60014 251 aa9.45□□□□□ -0.9
SF1-213ENST00000472725 DMAC1Q96GE9 116 aa9.45□□□□□ -0.9
SF1-213ENST00000472725 MT1FP04733 61 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms