RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 SMCPP49901 116 aaPredicted RBP3.38□□□□□ -1.87
HDAC1-204ENST00000471488 DSCR10P59022 87 aa3.38□□□□□ -1.87
HDAC1-204ENST00000471488 TMEM258P61165 79 aa3.38□□□□□ -1.87
HDAC1-204ENST00000471488 LINC01545Q5VT33 79 aa3.38□□□□□ -1.87
HDAC1-204ENST00000471488 TEN1Q86WV5 123 aa3.38□□□□□ -1.87
HDAC1-204ENST00000471488 CLEC2BQ92478 149 aa3.38□□□□□ -1.87
HDAC1-204ENST00000471488 IMUPQ9GZP8 106 aa3.37□□□□□ -1.87
HDAC1-204ENST00000471488 NHP2Q9NX24 153 aaKnown RBP3.37□□□□□ -1.87
HDAC1-204ENST00000471488 MUC12Q9UKN1 5478 aa3.37□□□□□ -1.87
HDAC1-204ENST00000471488 FAM236AA0A1B0GUQ0 79 aa3.36□□□□□ -1.87
HDAC1-204ENST00000471488 FAM236BA0A1B0GV22 79 aa3.36□□□□□ -1.87
HDAC1-204ENST00000471488 A8MUU9 505 aa3.36□□□□□ -1.87
HDAC1-204ENST00000471488 RAB37Q96AX2 223 aa3.36□□□□□ -1.87
HDAC1-204ENST00000471488 TRAV13-2A0A0B4J235 113 aa3.35□□□□□ -1.87
HDAC1-204ENST00000471488 TRBV7-6A0A0J9YX20 115 aa3.35□□□□□ -1.87
HDAC1-204ENST00000471488 ZNF815PA8K554 130 aa3.35□□□□□ -1.87
HDAC1-204ENST00000471488 Q6JHZ5 121 aa3.35□□□□□ -1.87
HDAC1-204ENST00000471488 CEND1Q8N111 149 aa3.35□□□□□ -1.87
HDAC1-204ENST00000471488 ANKRD29Q8N6D5 301 aa3.35□□□□□ -1.87
HDAC1-204ENST00000471488 COX7CP15954 63 aa3.34□□□□□ -1.87
HDAC1-204ENST00000471488 LITAFQ99732 161 aa3.34□□□□□ -1.87
HDAC1-204ENST00000471488 FAM240AA0A1B0GVK7 77 aa3.33□□□□□ -1.88
HDAC1-204ENST00000471488 KRTAP16-1A8MUX0 517 aa3.33□□□□□ -1.88
HDAC1-204ENST00000471488 HRES1P13985 223 aa3.33□□□□□ -1.88
HDAC1-204ENST00000471488 FXYD2P54710 66 aa3.33□□□□□ -1.88
HDAC1-204ENST00000471488 LYRM7Q5U5X0 104 aa3.33□□□□□ -1.88
HDAC1-204ENST00000471488 SCGB1D4Q6XE38 83 aa3.33□□□□□ -1.88
HDAC1-204ENST00000471488 Q6ZQY7 126 aa3.33□□□□□ -1.88
HDAC1-204ENST00000471488 TTTY13Q9BZ97 58 aa3.33□□□□□ -1.88
HDAC1-204ENST00000471488 TIMM17BO60830 172 aa3.32□□□□□ -1.88
HDAC1-204ENST00000471488 TRACP01848 142 aa3.32□□□□□ -1.88
HDAC1-204ENST00000471488 SMIM11BQ8TCY0 68 aa3.32□□□□□ -1.88
HDAC1-204ENST00000471488 A8MWP4 228 aa3.31□□□□□ -1.88
HDAC1-204ENST00000471488 PMAIP1Q13794 54 aa3.31□□□□□ -1.88
HDAC1-204ENST00000471488 hADV29S1A0JD25 119 aa3.3□□□□□ -1.88
HDAC1-204ENST00000471488 K7ERJ3 54 aa3.3□□□□□ -1.88
HDAC1-204ENST00000471488 SCGB1C2P0DMR2 95 aa3.3□□□□□ -1.88
HDAC1-204ENST00000471488 LINC00313P59037 77 aa3.3□□□□□ -1.88
HDAC1-204ENST00000471488 A0A087WSZ3 146 aa3.29□□□□□ -1.88
HDAC1-204ENST00000471488 HIST1H4AP62805 103 aaKnown RBP3.29□□□□□ -1.88
HDAC1-204ENST00000471488 NOTCH2NLQ7Z3S9 236 aa3.29□□□□□ -1.88
HDAC1-204ENST00000471488 MPLKIPQ8TAP9 179 aa3.29□□□□□ -1.88
HDAC1-204ENST00000471488 COPS9Q8WXC6 57 aa3.29□□□□□ -1.88
HDAC1-204ENST00000471488 SERP1Q9Y6X1 66 aa3.29□□□□□ -1.88
HDAC1-204ENST00000471488 A6NN06 94 aa3.28□□□□□ -1.88
HDAC1-204ENST00000471488 ATOX1O00244 68 aa3.28□□□□□ -1.88
HDAC1-204ENST00000471488 GHRHP01286 108 aa3.28□□□□□ -1.88
HDAC1-204ENST00000471488 LINC00575Q6W349 94 aa3.28□□□□□ -1.88
HDAC1-204ENST00000471488 MUSTN1Q8IVN3 82 aa3.28□□□□□ -1.88
HDAC1-204ENST00000471488 SMIM26A0A096LP01 95 aa3.27□□□□□ -1.89
HDAC1-204ENST00000471488 IGKV4-1P06312 121 aa3.27□□□□□ -1.89
HDAC1-204ENST00000471488 PRR15Q8IV56 129 aa3.27□□□□□ -1.89
HDAC1-204ENST00000471488 DSCR8Q96T75 97 aa3.27□□□□□ -1.89
HDAC1-204ENST00000471488 ACYP1P07311 99 aa3.26□□□□□ -1.89
HDAC1-204ENST00000471488 DEFB116Q30KQ4 102 aa3.26□□□□□ -1.89
HDAC1-204ENST00000471488 MDN1Q9NU22 5596 aa3.25□□□□□ -1.89
HDAC1-204ENST00000471488 IGHV6-1A0A0B4J1U7 121 aa3.25□□□□□ -1.89
HDAC1-204ENST00000471488 H3BT86 120 aa3.25□□□□□ -1.89
HDAC1-204ENST00000471488 PSMB2P49721 201 aa3.25□□□□□ -1.89
HDAC1-204ENST00000471488 LINC00643Q86TS7 51 aa3.25□□□□□ -1.89
HDAC1-204ENST00000471488 SERP2Q8N6R1 65 aa3.25□□□□□ -1.89
HDAC1-204ENST00000471488 SPINK7P58062 85 aa3.24□□□□□ -1.89
HDAC1-204ENST00000471488 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.24□□□□□ -1.89
HDAC1-204ENST00000471488 CYSTM1Q9H1C7 97 aa3.24□□□□□ -1.89
HDAC1-204ENST00000471488 WFDC13Q8IUB5 93 aa3.23□□□□□ -1.89
HDAC1-204ENST00000471488 A0A1W2PNM2 257 aa3.22□□□□□ -1.89
HDAC1-204ENST00000471488 H3BS24 57 aa3.22□□□□□ -1.89
HDAC1-204ENST00000471488 KRTAP2-3P0C7H8 128 aa3.22□□□□□ -1.89
HDAC1-204ENST00000471488 BRK1Q8WUW1 75 aa3.22□□□□□ -1.89
HDAC1-204ENST00000471488 KRTAP2-4Q9BYR9 128 aa3.22□□□□□ -1.89
HDAC1-204ENST00000471488 ATP5EP56381 51 aaPredicted RBP3.2□□□□□ -1.9
HDAC1-204ENST00000471488 HIST1H4GQ99525 98 aa3.2□□□□□ -1.9
HDAC1-204ENST00000471488 KMT2DO14686 5537 aa3.19□□□□□ -1.9
HDAC1-204ENST00000471488 ATXN8Q156A1 80 aa3.19□□□□□ -1.9
HDAC1-204ENST00000471488 ZCCHC13Q8WW36 166 aaKnown RBP3.19□□□□□ -1.9
HDAC1-204ENST00000471488 A0A0B4J2C4 111 aa3.17□□□□□ -1.9
HDAC1-204ENST00000471488 Q5VV11 94 aa3.17□□□□□ -1.9
HDAC1-204ENST00000471488 KTN1-AS1Q86SY8 53 aa3.17□□□□□ -1.9
HDAC1-204ENST00000471488 C8orf87E5RJ46 101 aa3.16□□□□□ -1.9
HDAC1-204ENST00000471488 KRTAP5-9P26371 169 aa3.16□□□□□ -1.9
HDAC1-204ENST00000471488 PRO1854Q9UHT4 67 aa3.16□□□□□ -1.9
HDAC1-204ENST00000471488 H7BZZ5 65 aa3.15□□□□□ -1.91
HDAC1-204ENST00000471488 CCKP06307 115 aa3.15□□□□□ -1.91
HDAC1-204ENST00000471488 SPRR2EP22531 72 aa3.15□□□□□ -1.91
HDAC1-204ENST00000471488 SPRR2BP35325 72 aa3.15□□□□□ -1.91
HDAC1-204ENST00000471488 SPRR2AP35326 72 aa3.15□□□□□ -1.91
HDAC1-204ENST00000471488 FAM218AQ96MZ4 157 aa3.15□□□□□ -1.91
HDAC1-204ENST00000471488 NDUFS5O43920 106 aa3.14□□□□□ -1.91
HDAC1-204ENST00000471488 H1FX-AS1Q4G0G2 97 aa3.14□□□□□ -1.91
HDAC1-204ENST00000471488 A0A1B0GVX0 72 aa3.13□□□□□ -1.91
HDAC1-204ENST00000471488 NDUFC1O43677 76 aa3.13□□□□□ -1.91
HDAC1-204ENST00000471488 KLKP1Q107X0 134 aa3.13□□□□□ -1.91
HDAC1-204ENST00000471488 SPRR2FQ96RM1 72 aa3.12□□□□□ -1.91
HDAC1-204ENST00000471488 TRBV7-4A0A0J9YYF1 115 aa3.11□□□□□ -1.91
HDAC1-204ENST00000471488 MT1BP07438 61 aa3.11□□□□□ -1.91
HDAC1-204ENST00000471488 KRTAP10-5P60370 271 aa3.11□□□□□ -1.91
HDAC1-204ENST00000471488 LINC00472Q9H8W2 130 aa3.11□□□□□ -1.91
HDAC1-204ENST00000471488 Q6ZVQ6 151 aa3.1□□□□□ -1.91
HDAC1-204ENST00000471488 KRTAP2-2Q9BYT5 123 aa3.1□□□□□ -1.91
HDAC1-204ENST00000471488 KRTAP2-1Q9BYU5 128 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms