RNA–Protein interactions for RNA: ENST00000470674.1

DDX1-205, Transcript of DEAD-box helicase 1, humanhuman

TSL 2

Gene DDX1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-205ENST00000470674 HIVEP2P31629 2446 aa2.83□□□□□ -1.96
DDX1-205ENST00000470674 OTOGQ6ZRI0 2925 aa2.83□□□□□ -1.96
DDX1-205ENST00000470674 CASC10Q5T4H9 136 aa2.83□□□□□ -1.96
DDX1-205ENST00000470674 LINC00304Q8N9R0 145 aa2.83□□□□□ -1.96
DDX1-205ENST00000470674 RIF1Q5UIP0 2472 aaKnown RBP2.83□□□□□ -1.96
DDX1-205ENST00000470674 LRRK2Q5S007 2527 aa2.83□□□□□ -1.96
DDX1-205ENST00000470674 DOPEY1Q5JWR5 2465 aa2.82□□□□□ -1.96
DDX1-205ENST00000470674 CHTF8P0CG12 524 aa2.82□□□□□ -1.96
DDX1-205ENST00000470674 IGF2RP11717 2491 aa2.82□□□□□ -1.96
DDX1-205ENST00000470674 USP9XQ93008 2570 aaPredicted RBP2.82□□□□□ -1.96
DDX1-205ENST00000470674 MUC6Q6W4X9 2439 aa2.81□□□□□ -1.96
DDX1-205ENST00000470674 K7ERS5 55 aa2.81□□□□□ -1.96
DDX1-205ENST00000470674 P0C880 135 aa2.81□□□□□ -1.96
DDX1-205ENST00000470674 ANAPC11Q9NYG5 84 aa2.81□□□□□ -1.96
DDX1-205ENST00000470674 CFAP46Q8IYW2 2715 aa2.81□□□□□ -1.96
DDX1-205ENST00000470674 LAMA5O15230 3695 aa2.81□□□□□ -1.96
DDX1-205ENST00000470674 USP9YO00507 2555 aaPredicted RBP2.8□□□□□ -1.96
DDX1-205ENST00000470674 PANO1I0J062 215 aa2.8□□□□□ -1.96
DDX1-205ENST00000470674 KRTAP11-1Q8IUC1 163 aa2.8□□□□□ -1.96
DDX1-205ENST00000470674 SVEP1Q4LDE5 3571 aa2.8□□□□□ -1.96
DDX1-205ENST00000470674 NBEAL2Q6ZNJ1 2754 aa2.79□□□□□ -1.96
DDX1-205ENST00000470674 NUPR2A6NF83 97 aa2.79□□□□□ -1.96
DDX1-205ENST00000470674 ZANQ9Y493 2812 aa2.79□□□□□ -1.96
DDX1-205ENST00000470674 EPG5Q9HCE0 2579 aa2.79□□□□□ -1.96
DDX1-205ENST00000470674 FBN2P35556 2912 aa2.78□□□□□ -1.96
DDX1-205ENST00000470674 F8P00451 2351 aa2.78□□□□□ -1.96
DDX1-205ENST00000470674 Q6ZSA8 131 aa2.78□□□□□ -1.96
DDX1-205ENST00000470674 NF1P21359 2839 aa2.78□□□□□ -1.97
DDX1-205ENST00000470674 ZFHX2Q9C0A1 2572 aaPredicted RBP2.77□□□□□ -1.97
DDX1-205ENST00000470674 A0A1B0GU33 70 aa2.77□□□□□ -1.97
DDX1-205ENST00000470674 H0YAA0 97 aa2.77□□□□□ -1.97
DDX1-205ENST00000470674 SSBP3-AS1Q7Z2R9 100 aa2.77□□□□□ -1.97
DDX1-205ENST00000470674 CHD8Q9HCK8 2581 aa2.77□□□□□ -1.97
DDX1-205ENST00000470674 AKAP9Q99996 3911 aa2.76□□□□□ -1.97
DDX1-205ENST00000470674 NBPF19A0A087WUL8 3843 aa2.76□□□□□ -1.97
DDX1-205ENST00000470674 VPS13CQ709C8 3753 aa2.76□□□□□ -1.97
DDX1-205ENST00000470674 PIEZO1Q92508 2521 aa2.76□□□□□ -1.97
DDX1-205ENST00000470674 NAV2Q8IVL1 2488 aa2.76□□□□□ -1.97
DDX1-205ENST00000470674 UNC79Q9P2D8 2635 aa2.75□□□□□ -1.97
DDX1-205ENST00000470674 H1FX-AS1Q4G0G2 97 aa2.75□□□□□ -1.97
DDX1-205ENST00000470674 LCE3EQ5T5B0 92 aa2.75□□□□□ -1.97
DDX1-205ENST00000470674 SPINK6Q6UWN8 80 aa2.75□□□□□ -1.97
DDX1-205ENST00000470674 C20orf166-AS1Q96NR2 134 aa2.75□□□□□ -1.97
DDX1-205ENST00000470674 HIVEP1P15822 2718 aa2.74□□□□□ -1.97
DDX1-205ENST00000470674 ITPR3Q14573 2671 aa2.74□□□□□ -1.97
DDX1-205ENST00000470674 MTORP42345 2549 aa2.73□□□□□ -1.97
DDX1-205ENST00000470674 TTC28Q96AY4 2481 aa2.73□□□□□ -1.97
DDX1-205ENST00000470674 A0A087WTM6 91 aa2.73□□□□□ -1.97
DDX1-205ENST00000470674 PSORS1C2Q9UIG4 136 aa2.73□□□□□ -1.97
DDX1-205ENST00000470674 SONP18583 2426 aaKnown RBP2.72□□□□□ -1.97
DDX1-205ENST00000470674 CENPEQ02224 2701 aa2.72□□□□□ -1.97
DDX1-205ENST00000470674 NIPBLQ6KC79 2804 aaeCLIP2.72□□□□□ -1.97
DDX1-205ENST00000470674 ACACBO00763 2458 aa2.72□□□□□ -1.97
DDX1-205ENST00000470674 SPINT4Q6UDR6 99 aa2.72□□□□□ -1.97
DDX1-205ENST00000470674 SPACA4Q8TDM5 124 aa2.72□□□□□ -1.97
DDX1-205ENST00000470674 MUC3AQ02505 3323 aa2.71□□□□□ -1.97
DDX1-205ENST00000470674 UBR5O95071 2799 aaPredicted RBP2.71□□□□□ -1.98
DDX1-205ENST00000470674 COX6B2Q6YFQ2 88 aa2.71□□□□□ -1.98
DDX1-205ENST00000470674 CSMD2Q7Z408 3487 aa2.7□□□□□ -1.98
DDX1-205ENST00000470674 SETD2Q9BYW2 2564 aaPredicted RBP2.7□□□□□ -1.98
DDX1-205ENST00000470674 PKD1L2Q7Z442 2459 aa2.7□□□□□ -1.98
DDX1-205ENST00000470674 ANK3Q12955 4377 aaKnown RBP2.7□□□□□ -1.98
DDX1-205ENST00000470674 SPINK1P00995 79 aa2.69□□□□□ -1.98
DDX1-205ENST00000470674 CIRBP-AS1Q8TBR5 109 aa2.69□□□□□ -1.98
DDX1-205ENST00000470674 POLQO75417 2590 aa2.69□□□□□ -1.98
DDX1-205ENST00000470674 FLNAP21333 2647 aaKnown RBP2.68□□□□□ -1.98
DDX1-205ENST00000470674 FLNCQ14315 2725 aa2.68□□□□□ -1.98
DDX1-205ENST00000470674 ZNF462Q96JM2 2506 aa2.68□□□□□ -1.98
DDX1-205ENST00000470674 SRRM2Q9UQ35 2752 aaKnown RBP2.67□□□□□ -1.98
DDX1-205ENST00000470674 TYMSOSQ8TAI1 123 aa2.67□□□□□ -1.98
DDX1-205ENST00000470674 NOTCH2Q04721 2471 aa2.67□□□□□ -1.98
DDX1-205ENST00000470674 HECTD1Q9ULT8 2610 aa2.66□□□□□ -1.98
DDX1-205ENST00000470674 TENM4Q6N022 2769 aa2.66□□□□□ -1.98
DDX1-205ENST00000470674 KRTAP5-8O75690 187 aa2.66□□□□□ -1.98
DDX1-205ENST00000470674 RPL37P61927 97 aaKnown RBP2.66□□□□□ -1.98
DDX1-205ENST00000470674 UBE2DNLQ8IWF7 75 aa2.66□□□□□ -1.98
DDX1-205ENST00000470674 ABCA12Q86UK0 2595 aa2.66□□□□□ -1.98
DDX1-205ENST00000470674 HELZ2Q9BYK8 2649 aaKnown RBP2.66□□□□□ -1.98
DDX1-205ENST00000470674 PKD1L1Q8TDX9 2849 aa2.65□□□□□ -1.98
DDX1-205ENST00000470674 CCDC168Q8NDH2 2452 aa2.65□□□□□ -1.98
DDX1-205ENST00000470674 BAHCC1Q9P281 2608 aa2.65□□□□□ -1.98
DDX1-205ENST00000470674 KRTAP1-4P0C5Y4 121 aa2.65□□□□□ -1.99
DDX1-205ENST00000470674 KRTAP12-2P59991 146 aa2.65□□□□□ -1.99
DDX1-205ENST00000470674 TPRXLQ17RH7 258 aa2.65□□□□□ -1.99
DDX1-205ENST00000470674 CRIPTQ9P021 101 aa2.65□□□□□ -1.99
DDX1-205ENST00000470674 VWFP04275 2813 aa2.64□□□□□ -1.99
DDX1-205ENST00000470674 DNAH1Q9P2D7 4330 aa2.64□□□□□ -1.99
DDX1-205ENST00000470674 Q6ZRN7 208 aaPredicted RBP2.64□□□□□ -1.99
DDX1-205ENST00000470674 FAM208BQ5VWN6 2430 aa2.63□□□□□ -1.99
DDX1-205ENST00000470674 NBDYA0A0U1RRE5 68 aa2.63□□□□□ -1.99
DDX1-205ENST00000470674 LUZP6Q538Z0 58 aa2.63□□□□□ -1.99
DDX1-205ENST00000470674 APLNQ9ULZ1 77 aa2.63□□□□□ -1.99
DDX1-205ENST00000470674 FBN1P35555 2871 aaKnown RBP2.63□□□□□ -1.99
DDX1-205ENST00000470674 MYO18BQ8IUG5 2567 aa2.63□□□□□ -1.99
DDX1-205ENST00000470674 TENM3Q9P273 2699 aa2.61□□□□□ -1.99
DDX1-205ENST00000470674 IGSF10Q6WRI0 2623 aa2.61□□□□□ -1.99
DDX1-205ENST00000470674 MEGF8Q7Z7M0 2845 aa2.6□□□□□ -1.99
DDX1-205ENST00000470674 TEP1Q99973 2627 aaKnown RBP2.59□□□□□ -1.99
DDX1-205ENST00000470674 FLG2Q5D862 2391 aaPredicted RBP2.59□□□□□ -1.99
DDX1-205ENST00000470674 PDZD2O15018 2839 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms