RNA–Protein interactions for RNA: ENST00000463343.1

SF1-212, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 983 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-212ENST00000463343 CRCT1Q9UGL9 99 aa9.46□□□□□ -0.9
SF1-212ENST00000463343 DSCR10P59022 87 aa9.45□□□□□ -0.9
SF1-212ENST00000463343 K7EP34 96 aa9.44□□□□□ -0.9
SF1-212ENST00000463343 PRO0461Q9UI25 63 aa9.43□□□□□ -0.9
SF1-212ENST00000463343 FSIP2Q5CZC0 6907 aa9.43□□□□□ -0.9
SF1-212ENST00000463343 Q75L30 129 aa9.42□□□□□ -0.9
SF1-212ENST00000463343 LINC00313P59037 77 aa9.41□□□□□ -0.9
SF1-212ENST00000463343 LCE2CQ5TA81 110 aa9.4□□□□□ -0.9
SF1-212ENST00000463343 NOTCH2NLQ7Z3S9 236 aa9.4□□□□□ -0.9
SF1-212ENST00000463343 IGHV6-1A0A0B4J1U7 121 aa9.38□□□□□ -0.91
SF1-212ENST00000463343 A8MUU9 505 aa9.38□□□□□ -0.91
SF1-212ENST00000463343 J3KT08 172 aa9.38□□□□□ -0.91
SF1-212ENST00000463343 C20orf166-AS1Q96NR2 134 aa9.38□□□□□ -0.91
SF1-212ENST00000463343 KRTAP16-1A8MUX0 517 aa9.36□□□□□ -0.91
SF1-212ENST00000463343 A0A1B0GVX0 72 aa9.35□□□□□ -0.91
SF1-212ENST00000463343 GTF2H5Q6ZYL4 71 aa9.35□□□□□ -0.91
SF1-212ENST00000463343 NREPQ16612 68 aa9.34□□□□□ -0.91
SF1-212ENST00000463343 ATP11AUNQ6ZP68 121 aa9.34□□□□□ -0.91
SF1-212ENST00000463343 KRTAP19-2Q3LHN2 52 aa9.33□□□□□ -0.92
SF1-212ENST00000463343 C8orf87E5RJ46 101 aa9.31□□□□□ -0.92
SF1-212ENST00000463343 A8MWP4 228 aa9.29□□□□□ -0.92
SF1-212ENST00000463343 NDUFB1O75438 58 aa9.29□□□□□ -0.92
SF1-212ENST00000463343 IGKV3D-7A0A0C4DH55 119 aa9.28□□□□□ -0.92
SF1-212ENST00000463343 F8W1H4 67 aa9.28□□□□□ -0.92
SF1-212ENST00000463343 MT1HP80294 61 aa9.28□□□□□ -0.92
SF1-212ENST00000463343 PRR15Q8IV56 129 aa9.23□□□□□ -0.93
SF1-212ENST00000463343 C8orf17Q9NRJ1 99 aa9.23□□□□□ -0.93
SF1-212ENST00000463343 ETDBQ3ZM63 59 aa9.22□□□□□ -0.93
SF1-212ENST00000463343 Q6ZVQ6 151 aa9.22□□□□□ -0.93
SF1-212ENST00000463343 LORP23490 312 aaPredicted RBP9.2□□□□□ -0.94
SF1-212ENST00000463343 LINC00846Q9NV44 126 aa9.19□□□□□ -0.94
SF1-212ENST00000463343 BPY2O14599 106 aa9.18□□□□□ -0.94
SF1-212ENST00000463343 KRTAP10-6P60371 365 aaPredicted RBP9.17□□□□□ -0.94
SF1-212ENST00000463343 K7EQZ3 153 aa9.16□□□□□ -0.94
SF1-212ENST00000463343 Q8N9P0 234 aaPredicted RBP9.16□□□□□ -0.94
SF1-212ENST00000463343 MMP24-AS1A0A0U1RRL7 71 aa9.14□□□□□ -0.95
SF1-212ENST00000463343 UBL5Q9BZL1 73 aa9.12□□□□□ -0.95
SF1-212ENST00000463343 Q8N9L7 120 aa9.1□□□□□ -0.95
SF1-212ENST00000463343 TMEM254Q8TBM7 123 aa9.1□□□□□ -0.95
SF1-212ENST00000463343 ZCCHC13Q8WW36 166 aaKnown RBP9.1□□□□□ -0.95
SF1-212ENST00000463343 A0A1B0GV90 55 aa9.09□□□□□ -0.95
SF1-212ENST00000463343 MRPL34Q9BQ48 92 aaKnown RBP9.08□□□□□ -0.96
SF1-212ENST00000463343 hDV103S1A0JD37 113 aa9.07□□□□□ -0.96
SF1-212ENST00000463343 COX6B2Q6YFQ2 88 aa9.07□□□□□ -0.96
SF1-212ENST00000463343 M0R2T5 61 aa9.05□□□□□ -0.96
SF1-212ENST00000463343 FLGP20930 4061 aaPredicted RBP9.01□□□□□ -0.97
SF1-212ENST00000463343 WFDC13Q8IUB5 93 aa9.01□□□□□ -0.97
SF1-212ENST00000463343 HRES1P13985 223 aa9□□□□□ -0.97
SF1-212ENST00000463343 CASC2Q6XLA1 102 aa9□□□□□ -0.97
SF1-212ENST00000463343 SPINK7P58062 85 aa8.98□□□□□ -0.97
SF1-212ENST00000463343 NDUFS5O43920 106 aa8.97□□□□□ -0.97
SF1-212ENST00000463343 ACYP1P07311 99 aa8.97□□□□□ -0.97
SF1-212ENST00000463343 MPLKIPQ8TAP9 179 aa8.97□□□□□ -0.97
SF1-212ENST00000463343 CXCL6P80162 114 aa8.96□□□□□ -0.98
SF1-212ENST00000463343 FAM240AA0A1B0GVK7 77 aa8.93□□□□□ -0.98
SF1-212ENST00000463343 HCG22E2RYF7 251 aa8.93□□□□□ -0.98
SF1-212ENST00000463343 Q5W150 140 aa8.92□□□□□ -0.98
SF1-212ENST00000463343 RBM12B-AS1Q9P1G2 102 aa8.9□□□□□ -0.98
SF1-212ENST00000463343 FAM236DA0A1B0GTK5 79 aa8.87□□□□□ -0.99
SF1-212ENST00000463343 FAM236CP0DP71 79 aa8.87□□□□□ -0.99
SF1-212ENST00000463343 KRTAP9-7A8MTY7 169 aa8.81□□□□□ -1
SF1-212ENST00000463343 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.8□□□□□ -1
SF1-212ENST00000463343 ATP5EP2Q5VTU8 51 aa8.8□□□□□ -1
SF1-212ENST00000463343 IGKV2D-30A0A075B6S6 120 aa8.79□□□□□ -1
SF1-212ENST00000463343 IGKV2-30P06310 120 aa8.79□□□□□ -1
SF1-212ENST00000463343 LINC00643Q86TS7 51 aa8.78□□□□□ -1
SF1-212ENST00000463343 KRTAP9-8Q9BYQ0 159 aa8.76□□□□□ -1.01
SF1-212ENST00000463343 C7orf65Q6ZTY9 151 aa8.75□□□□□ -1.01
SF1-212ENST00000463343 TP53AIP1Q9HCN2 124 aa8.75□□□□□ -1.01
SF1-212ENST00000463343 HIST1H4AP62805 103 aaKnown RBP8.74□□□□□ -1.01
SF1-212ENST00000463343 J3QR89 54 aa8.71□□□□□ -1.02
SF1-212ENST00000463343 SSPOA2VEC9 5147 aa8.7□□□□□ -1.02
SF1-212ENST00000463343 USH2AO75445 5202 aa8.7□□□□□ -1.02
SF1-212ENST00000463343 A0A087WVE0 104 aa8.67□□□□□ -1.02
SF1-212ENST00000463343 C4orf26Q17RF5 130 aa8.63□□□□□ -1.03
SF1-212ENST00000463343 H1FX-AS1Q4G0G2 97 aa8.63□□□□□ -1.03
SF1-212ENST00000463343 FCGBPQ9Y6R7 5405 aaPredicted RBP8.59□□□□□ -1.03
SF1-212ENST00000463343 UQCRQO14949 82 aa8.58□□□□□ -1.04
SF1-212ENST00000463343 TRAV22A0A0B4J277 110 aa8.57□□□□□ -1.04
SF1-212ENST00000463343 MT2AP02795 61 aa8.56□□□□□ -1.04
SF1-212ENST00000463343 CYP4F30PQ9H0H9 118 aa8.56□□□□□ -1.04
SF1-212ENST00000463343 KRTAP3-1Q9BYR8 98 aa8.55□□□□□ -1.04
SF1-212ENST00000463343 LOC101927531A0A1B0GV80 90 aa8.51□□□□□ -1.05
SF1-212ENST00000463343 H0Y9P7 68 aa8.51□□□□□ -1.05
SF1-212ENST00000463343 K7ERU9 68 aa8.51□□□□□ -1.05
SF1-212ENST00000463343 LCE2BO14633 110 aa8.51□□□□□ -1.05
SF1-212ENST00000463343 KRTAP19-1Q8IUB9 90 aa8.51□□□□□ -1.05
SF1-212ENST00000463343 C1orf64Q8NEQ6 169 aa8.5□□□□□ -1.05
SF1-212ENST00000463343 KRTAP9-3Q9BYQ3 159 aa8.5□□□□□ -1.05
SF1-212ENST00000463343 OCR1Q9BZK8 76 aa8.49□□□□□ -1.05
SF1-212ENST00000463343 ATOX1O00244 68 aa8.47□□□□□ -1.05
SF1-212ENST00000463343 MT1FP04733 61 aa8.47□□□□□ -1.05
SF1-212ENST00000463343 MT-ATP8P03928 68 aa8.44□□□□□ -1.06
SF1-212ENST00000463343 KRTAP10-10P60014 251 aa8.44□□□□□ -1.06
SF1-212ENST00000463343 IMUPQ9GZP8 106 aa8.42□□□□□ -1.06
SF1-212ENST00000463343 LINC00208Q96KT6 92 aa8.41□□□□□ -1.06
SF1-212ENST00000463343 SCGB1A1P11684 91 aa8.39□□□□□ -1.07
SF1-212ENST00000463343 C5orf47Q569G3 176 aa8.39□□□□□ -1.07
SF1-212ENST00000463343 MP68P56378 58 aa8.38□□□□□ -1.07
SF1-212ENST00000463343 S4R3F8 94 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms