RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 DNAL4O96015 105 aa4.98□□□□□ -1.61
HDLBP-227ENST00000458564 CEND1Q8N111 149 aa4.98□□□□□ -1.61
HDLBP-227ENST00000458564 C14orf144Q96I85 54 aa4.98□□□□□ -1.61
HDLBP-227ENST00000458564 A0A1B0GV72 72 aa4.97□□□□□ -1.61
HDLBP-227ENST00000458564 S100A6P06703 90 aa4.96□□□□□ -1.62
HDLBP-227ENST00000458564 Q8N9P0 234 aaPredicted RBP4.96□□□□□ -1.62
HDLBP-227ENST00000458564 FXYD2P54710 66 aa4.95□□□□□ -1.62
HDLBP-227ENST00000458564 UBE2V1Q13404 147 aa4.95□□□□□ -1.62
HDLBP-227ENST00000458564 WFDC13Q8IUB5 93 aa4.95□□□□□ -1.62
HDLBP-227ENST00000458564 J3KT08 172 aa4.94□□□□□ -1.62
HDLBP-227ENST00000458564 SPATA45Q537H7 98 aa4.94□□□□□ -1.62
HDLBP-227ENST00000458564 PAM16Q9Y3D7 125 aa4.94□□□□□ -1.62
HDLBP-227ENST00000458564 C21orf62-AS1Q17RA5 79 aa4.92□□□□□ -1.62
HDLBP-227ENST00000458564 NEBP20929 6669 aa4.91□□□□□ -1.62
HDLBP-227ENST00000458564 COX6CP09669 75 aa4.9□□□□□ -1.63
HDLBP-227ENST00000458564 VPS25Q9BRG1 176 aa4.9□□□□□ -1.63
HDLBP-227ENST00000458564 VAMP8Q9BV40 100 aa4.9□□□□□ -1.63
HDLBP-227ENST00000458564 PSMB2P49721 201 aa4.89□□□□□ -1.63
HDLBP-227ENST00000458564 RBM3P98179 157 aaKnown RBP4.89□□□□□ -1.63
HDLBP-227ENST00000458564 DSCR8Q96T75 97 aa4.89□□□□□ -1.63
HDLBP-227ENST00000458564 NDUFB1O75438 58 aa4.88□□□□□ -1.63
HDLBP-227ENST00000458564 Q6ZQT0 140 aa4.88□□□□□ -1.63
HDLBP-227ENST00000458564 MUC12Q9UKN1 5478 aa4.88□□□□□ -1.63
HDLBP-227ENST00000458564 K7ERJ3 54 aa4.87□□□□□ -1.63
HDLBP-227ENST00000458564 C8orf17Q9NRJ1 99 aa4.87□□□□□ -1.63
HDLBP-227ENST00000458564 HSD52Q0P140 79 aa4.86□□□□□ -1.63
HDLBP-227ENST00000458564 H1FX-AS1Q4G0G2 97 aa4.86□□□□□ -1.63
HDLBP-227ENST00000458564 C9JAW5 83 aa4.85□□□□□ -1.63
HDLBP-227ENST00000458564 LYRM7Q5U5X0 104 aa4.85□□□□□ -1.63
HDLBP-227ENST00000458564 IGKV3D-7A0A0C4DH55 119 aa4.84□□□□□ -1.63
HDLBP-227ENST00000458564 A0A1B0GW54 56 aa4.83□□□□□ -1.64
HDLBP-227ENST00000458564 Q6ZVQ6 151 aa4.83□□□□□ -1.64
HDLBP-227ENST00000458564 PRR15Q8IV56 129 aa4.8□□□□□ -1.64
HDLBP-227ENST00000458564 BAALC-AS2P0C853 105 aa4.79□□□□□ -1.64
HDLBP-227ENST00000458564 LOC110117498A0A087WWA1 95 aa4.78□□□□□ -1.64
HDLBP-227ENST00000458564 SCGB1C2P0DMR2 95 aa4.78□□□□□ -1.64
HDLBP-227ENST00000458564 TMEM254Q8TBM7 123 aa4.78□□□□□ -1.64
HDLBP-227ENST00000458564 MRPL34Q9BQ48 92 aaKnown RBP4.78□□□□□ -1.64
HDLBP-227ENST00000458564 MMP24-AS1A0A0U1RRL7 71 aa4.77□□□□□ -1.65
HDLBP-227ENST00000458564 A6NN06 94 aa4.77□□□□□ -1.65
HDLBP-227ENST00000458564 JMJD7-PLA2G4BH0Y9G9 81 aa4.76□□□□□ -1.65
HDLBP-227ENST00000458564 PDE6GP18545 87 aa4.76□□□□□ -1.65
HDLBP-227ENST00000458564 MT1BP07438 61 aa4.75□□□□□ -1.65
HDLBP-227ENST00000458564 TMA7Q9Y2S6 64 aaKnown RBP4.75□□□□□ -1.65
HDLBP-227ENST00000458564 KRTAP20-1Q3LI63 56 aa4.74□□□□□ -1.65
HDLBP-227ENST00000458564 C7orf65Q6ZTY9 151 aa4.74□□□□□ -1.65
HDLBP-227ENST00000458564 hDV103S1A0JD37 113 aa4.73□□□□□ -1.65
HDLBP-227ENST00000458564 PYY3Q5JQD4 70 aa4.73□□□□□ -1.65
HDLBP-227ENST00000458564 IGKV2D-30A0A075B6S6 120 aa4.72□□□□□ -1.65
HDLBP-227ENST00000458564 IGKV2-30P06310 120 aa4.72□□□□□ -1.65
HDLBP-227ENST00000458564 KRTAP5-9P26371 169 aa4.72□□□□□ -1.65
HDLBP-227ENST00000458564 Q5VV11 94 aa4.72□□□□□ -1.65
HDLBP-227ENST00000458564 UQCR10Q9UDW1 63 aa4.72□□□□□ -1.65
HDLBP-227ENST00000458564 MDN1Q9NU22 5596 aa4.72□□□□□ -1.65
HDLBP-227ENST00000458564 KMT2DO14686 5537 aa4.71□□□□□ -1.65
HDLBP-227ENST00000458564 NREPQ16612 68 aa4.71□□□□□ -1.66
HDLBP-227ENST00000458564 KRTAP19-8Q3LI54 63 aa4.71□□□□□ -1.66
HDLBP-227ENST00000458564 SPRR2GQ9BYE4 73 aa4.71□□□□□ -1.66
HDLBP-227ENST00000458564 NDUFS5O43920 106 aa4.7□□□□□ -1.66
HDLBP-227ENST00000458564 KRTAP10-5P60370 271 aa4.7□□□□□ -1.66
HDLBP-227ENST00000458564 ATXN8Q156A1 80 aa4.7□□□□□ -1.66
HDLBP-227ENST00000458564 C14orf132Q9NPU4 83 aa4.7□□□□□ -1.66
HDLBP-227ENST00000458564 K7EQZ3 153 aa4.69□□□□□ -1.66
HDLBP-227ENST00000458564 Q5W150 140 aa4.69□□□□□ -1.66
HDLBP-227ENST00000458564 FAM236AA0A1B0GUQ0 79 aa4.68□□□□□ -1.66
HDLBP-227ENST00000458564 FAM236BA0A1B0GV22 79 aa4.68□□□□□ -1.66
HDLBP-227ENST00000458564 LOC105371267A0A1B0GV96 52 aa4.68□□□□□ -1.66
HDLBP-227ENST00000458564 C4orf26Q17RF5 130 aa4.67□□□□□ -1.66
HDLBP-227ENST00000458564 C5orf47Q569G3 176 aa4.67□□□□□ -1.66
HDLBP-227ENST00000458564 CSAG1Q6PB30 78 aa4.62□□□□□ -1.67
HDLBP-227ENST00000458564 NAA38Q9BRA0 125 aaKnown RBP4.62□□□□□ -1.67
HDLBP-227ENST00000458564 KRTAP3-1Q9BYR8 98 aa4.62□□□□□ -1.67
HDLBP-227ENST00000458564 S4R3F8 94 aa4.62□□□□□ -1.67
HDLBP-227ENST00000458564 BPY2O14599 106 aa4.61□□□□□ -1.67
HDLBP-227ENST00000458564 HCG22E2RYF7 251 aa4.6□□□□□ -1.67
HDLBP-227ENST00000458564 CXCL6P80162 114 aa4.6□□□□□ -1.67
HDLBP-227ENST00000458564 CASC2Q6XLA1 102 aa4.6□□□□□ -1.67
HDLBP-227ENST00000458564 M0R143 59 aa4.59□□□□□ -1.67
HDLBP-227ENST00000458564 KLKP1Q107X0 134 aa4.59□□□□□ -1.67
HDLBP-227ENST00000458564 LCA10Q71F78 164 aa4.59□□□□□ -1.67
HDLBP-227ENST00000458564 Q8N9L7 120 aa4.57□□□□□ -1.68
HDLBP-227ENST00000458564 KRTAP2-3P0C7H8 128 aa4.56□□□□□ -1.68
HDLBP-227ENST00000458564 KRTAP2-4Q9BYR9 128 aa4.56□□□□□ -1.68
HDLBP-227ENST00000458564 C1orf64Q8NEQ6 169 aa4.55□□□□□ -1.68
HDLBP-227ENST00000458564 H3BT86 120 aa4.54□□□□□ -1.68
HDLBP-227ENST00000458564 SMIM6P0DI80 62 aa4.54□□□□□ -1.68
HDLBP-227ENST00000458564 SMCPP49901 116 aaPredicted RBP4.54□□□□□ -1.68
HDLBP-227ENST00000458564 CRIPTQ9P021 101 aa4.53□□□□□ -1.68
HDLBP-227ENST00000458564 IMUPQ9GZP8 106 aa4.52□□□□□ -1.69
HDLBP-227ENST00000458564 KRTAP3-3Q9BYR6 98 aa4.51□□□□□ -1.69
HDLBP-227ENST00000458564 SPRR2FQ96RM1 72 aa4.47□□□□□ -1.69
HDLBP-227ENST00000458564 TSTD3H0UI37 97 aa4.46□□□□□ -1.7
HDLBP-227ENST00000458564 SPRR2EP22531 72 aa4.46□□□□□ -1.7
HDLBP-227ENST00000458564 SPRR2BP35325 72 aa4.46□□□□□ -1.7
HDLBP-227ENST00000458564 SPRR2AP35326 72 aa4.46□□□□□ -1.7
HDLBP-227ENST00000458564 TP53AIP1Q9HCN2 124 aa4.44□□□□□ -1.7
HDLBP-227ENST00000458564 A0A1W2PPM0 123 aa4.43□□□□□ -1.7
HDLBP-227ENST00000458564 C9orf118A6NHY6 69 aa4.43□□□□□ -1.7
HDLBP-227ENST00000458564 H0YAA0 97 aa4.42□□□□□ -1.7
HDLBP-227ENST00000458564 UBL5Q9BZL1 73 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms