RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 DSCR10P59022 87 aa10.6□□□□□ -0.71
COL9A3-202ENST00000452372 LINC00313P59037 77 aa10.59□□□□□ -0.71
COL9A3-202ENST00000452372 C20orf166-AS1Q96NR2 134 aa10.58□□□□□ -0.72
COL9A3-202ENST00000452372 J3KT08 172 aa10.57□□□□□ -0.72
COL9A3-202ENST00000452372 KRTAP19-2Q3LHN2 52 aa10.57□□□□□ -0.72
COL9A3-202ENST00000452372 A8MUU9 505 aa10.56□□□□□ -0.72
COL9A3-202ENST00000452372 ATP11AUNQ6ZP68 121 aa10.56□□□□□ -0.72
COL9A3-202ENST00000452372 K7EP34 96 aa10.55□□□□□ -0.72
COL9A3-202ENST00000452372 SMCPP49901 116 aaPredicted RBP10.55□□□□□ -0.72
COL9A3-202ENST00000452372 IGHV6-1A0A0B4J1U7 121 aa10.54□□□□□ -0.72
COL9A3-202ENST00000452372 LCE2DQ5TA82 110 aaPredicted RBP10.53□□□□□ -0.72
COL9A3-202ENST00000452372 NOTCH2NLQ7Z3S9 236 aa10.53□□□□□ -0.72
COL9A3-202ENST00000452372 A0A1B0GVX0 72 aa10.52□□□□□ -0.73
COL9A3-202ENST00000452372 KRTAP16-1A8MUX0 517 aa10.51□□□□□ -0.73
COL9A3-202ENST00000452372 PRO0461Q9UI25 63 aa10.51□□□□□ -0.73
COL9A3-202ENST00000452372 C8orf87E5RJ46 101 aa10.49□□□□□ -0.73
COL9A3-202ENST00000452372 NREPQ16612 68 aa10.49□□□□□ -0.73
COL9A3-202ENST00000452372 NDUFB1O75438 58 aa10.47□□□□□ -0.73
COL9A3-202ENST00000452372 GTF2H5Q6ZYL4 71 aa10.47□□□□□ -0.73
COL9A3-202ENST00000452372 A8MWP4 228 aa10.44□□□□□ -0.74
COL9A3-202ENST00000452372 MT1HP80294 61 aa10.42□□□□□ -0.74
COL9A3-202ENST00000452372 FSIP2Q5CZC0 6907 aa10.41□□□□□ -0.74
COL9A3-202ENST00000452372 IGKV3D-7A0A0C4DH55 119 aa10.4□□□□□ -0.74
COL9A3-202ENST00000452372 F8W1H4 67 aa10.38□□□□□ -0.75
COL9A3-202ENST00000452372 PRR15Q8IV56 129 aa10.37□□□□□ -0.75
COL9A3-202ENST00000452372 C8orf17Q9NRJ1 99 aa10.37□□□□□ -0.75
COL9A3-202ENST00000452372 Q6ZVQ6 151 aa10.33□□□□□ -0.76
COL9A3-202ENST00000452372 FLGP20930 4061 aaPredicted RBP10.33□□□□□ -0.76
COL9A3-202ENST00000452372 CRCT1Q9UGL9 99 aa10.32□□□□□ -0.76
COL9A3-202ENST00000452372 BPY2O14599 106 aa10.31□□□□□ -0.76
COL9A3-202ENST00000452372 Q8N9P0 234 aaPredicted RBP10.31□□□□□ -0.76
COL9A3-202ENST00000452372 ETDBQ3ZM63 59 aa10.29□□□□□ -0.76
COL9A3-202ENST00000452372 K7EQZ3 153 aa10.28□□□□□ -0.76
COL9A3-202ENST00000452372 LORP23490 312 aaPredicted RBP10.28□□□□□ -0.76
COL9A3-202ENST00000452372 LINC00846Q9NV44 126 aa10.28□□□□□ -0.76
COL9A3-202ENST00000452372 MMP24-AS1A0A0U1RRL7 71 aa10.26□□□□□ -0.77
COL9A3-202ENST00000452372 COX6B2Q6YFQ2 88 aa10.26□□□□□ -0.77
COL9A3-202ENST00000452372 KRTAP10-6P60371 365 aaPredicted RBP10.25□□□□□ -0.77
COL9A3-202ENST00000452372 UBL5Q9BZL1 73 aa10.25□□□□□ -0.77
COL9A3-202ENST00000452372 ZCCHC13Q8WW36 166 aaKnown RBP10.24□□□□□ -0.77
COL9A3-202ENST00000452372 TMEM254Q8TBM7 123 aa10.23□□□□□ -0.77
COL9A3-202ENST00000452372 MRPL34Q9BQ48 92 aaKnown RBP10.22□□□□□ -0.77
COL9A3-202ENST00000452372 hDV103S1A0JD37 113 aa10.2□□□□□ -0.78
COL9A3-202ENST00000452372 Q8N9L7 120 aa10.18□□□□□ -0.78
COL9A3-202ENST00000452372 HRES1P13985 223 aa10.13□□□□□ -0.79
COL9A3-202ENST00000452372 MPLKIPQ8TAP9 179 aa10.11□□□□□ -0.79
COL9A3-202ENST00000452372 M0R2T5 61 aa10.1□□□□□ -0.79
COL9A3-202ENST00000452372 NDUFS5O43920 106 aa10.1□□□□□ -0.79
COL9A3-202ENST00000452372 SPINK7P58062 85 aa10.1□□□□□ -0.79
COL9A3-202ENST00000452372 CASC2Q6XLA1 102 aa10.1□□□□□ -0.79
COL9A3-202ENST00000452372 WFDC13Q8IUB5 93 aa10.1□□□□□ -0.79
COL9A3-202ENST00000452372 A0A1B0GV90 55 aa10.08□□□□□ -0.8
COL9A3-202ENST00000452372 RBM12B-AS1Q9P1G2 102 aa10.07□□□□□ -0.8
COL9A3-202ENST00000452372 ACYP1P07311 99 aa10.06□□□□□ -0.8
COL9A3-202ENST00000452372 CXCL6P80162 114 aa10.06□□□□□ -0.8
COL9A3-202ENST00000452372 HCG22E2RYF7 251 aa10.03□□□□□ -0.8
COL9A3-202ENST00000452372 FAM236DA0A1B0GTK5 79 aa10.02□□□□□ -0.81
COL9A3-202ENST00000452372 FAM236CP0DP71 79 aa10.02□□□□□ -0.81
COL9A3-202ENST00000452372 FAM240AA0A1B0GVK7 77 aa10.01□□□□□ -0.81
COL9A3-202ENST00000452372 Q5W150 140 aa9.98□□□□□ -0.81
COL9A3-202ENST00000452372 ATP5EP2Q5VTU8 51 aa9.89□□□□□ -0.83
COL9A3-202ENST00000452372 IGKV2D-30A0A075B6S6 120 aa9.88□□□□□ -0.83
COL9A3-202ENST00000452372 IGKV2-30P06310 120 aa9.88□□□□□ -0.83
COL9A3-202ENST00000452372 KRTAP9-8Q9BYQ0 159 aa9.88□□□□□ -0.83
COL9A3-202ENST00000452372 C7orf65Q6ZTY9 151 aa9.87□□□□□ -0.83
COL9A3-202ENST00000452372 TP53AIP1Q9HCN2 124 aa9.86□□□□□ -0.83
COL9A3-202ENST00000452372 USH2AO75445 5202 aa9.86□□□□□ -0.83
COL9A3-202ENST00000452372 LINC00643Q86TS7 51 aa9.82□□□□□ -0.84
COL9A3-202ENST00000452372 SSPOA2VEC9 5147 aa9.8□□□□□ -0.84
COL9A3-202ENST00000452372 HIST1H4AP62805 103 aaKnown RBP9.79□□□□□ -0.84
COL9A3-202ENST00000452372 J3QR89 54 aa9.76□□□□□ -0.85
COL9A3-202ENST00000452372 H1FX-AS1Q4G0G2 97 aa9.72□□□□□ -0.85
COL9A3-202ENST00000452372 C4orf26Q17RF5 130 aa9.69□□□□□ -0.86
COL9A3-202ENST00000452372 A0A087WVE0 104 aa9.68□□□□□ -0.86
COL9A3-202ENST00000452372 MT2AP02795 61 aa9.68□□□□□ -0.86
COL9A3-202ENST00000452372 TRAV22A0A0B4J277 110 aa9.65□□□□□ -0.86
COL9A3-202ENST00000452372 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.62□□□□□ -0.87
COL9A3-202ENST00000452372 UQCRQO14949 82 aa9.62□□□□□ -0.87
COL9A3-202ENST00000452372 FCGBPQ9Y6R7 5405 aaPredicted RBP9.61□□□□□ -0.87
COL9A3-202ENST00000452372 MT1FP04733 61 aa9.61□□□□□ -0.87
COL9A3-202ENST00000452372 CYP4F30PQ9H0H9 118 aa9.61□□□□□ -0.87
COL9A3-202ENST00000452372 LOC101927531A0A1B0GV80 90 aa9.58□□□□□ -0.88
COL9A3-202ENST00000452372 LCE2BO14633 110 aa9.58□□□□□ -0.88
COL9A3-202ENST00000452372 KRTAP9-3Q9BYQ3 159 aa9.58□□□□□ -0.88
COL9A3-202ENST00000452372 KRTAP3-1Q9BYR8 98 aa9.58□□□□□ -0.88
COL9A3-202ENST00000452372 C1orf64Q8NEQ6 169 aa9.56□□□□□ -0.88
COL9A3-202ENST00000452372 KRTAP9-7A8MTY7 169 aa9.55□□□□□ -0.88
COL9A3-202ENST00000452372 H0Y9P7 68 aa9.54□□□□□ -0.88
COL9A3-202ENST00000452372 ATOX1O00244 68 aa9.54□□□□□ -0.88
COL9A3-202ENST00000452372 KRTAP10-10P60014 251 aa9.52□□□□□ -0.89
COL9A3-202ENST00000452372 K7ERU9 68 aa9.51□□□□□ -0.89
COL9A3-202ENST00000452372 OCR1Q9BZK8 76 aa9.51□□□□□ -0.89
COL9A3-202ENST00000452372 KRTAP19-1Q8IUB9 90 aa9.47□□□□□ -0.89
COL9A3-202ENST00000452372 IMUPQ9GZP8 106 aa9.43□□□□□ -0.9
COL9A3-202ENST00000452372 S4R3F8 94 aa9.43□□□□□ -0.9
COL9A3-202ENST00000452372 LINC00208Q96KT6 92 aa9.42□□□□□ -0.9
COL9A3-202ENST00000452372 MP68P56378 58 aa9.41□□□□□ -0.9
COL9A3-202ENST00000452372 C5orf47Q569G3 176 aa9.41□□□□□ -0.9
COL9A3-202ENST00000452372 SCGB1A1P11684 91 aa9.4□□□□□ -0.9
COL9A3-202ENST00000452372 MT-ATP8P03928 68 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms