RNA–Protein interactions for RNA: ENST00000427455.1

HERPUD2-205, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-205ENST00000427455 LINC00313P59037 77 aa13.39□□□□□ -0.27
HERPUD2-205ENST00000427455 C20orf166-AS1Q96NR2 134 aa13.38□□□□□ -0.27
HERPUD2-205ENST00000427455 PRO0461Q9UI25 63 aa13.37□□□□□ -0.27
HERPUD2-205ENST00000427455 IGHV6-1A0A0B4J1U7 121 aa13.36□□□□□ -0.27
HERPUD2-205ENST00000427455 GTF2H5Q6ZYL4 71 aa13.36□□□□□ -0.27
HERPUD2-205ENST00000427455 A8MUU9 505 aa13.35□□□□□ -0.27
HERPUD2-205ENST00000427455 A0A1B0GVX0 72 aa13.34□□□□□ -0.27
HERPUD2-205ENST00000427455 ATP11AUNQ6ZP68 121 aa13.34□□□□□ -0.27
HERPUD2-205ENST00000427455 C8orf87E5RJ46 101 aa13.31□□□□□ -0.28
HERPUD2-205ENST00000427455 NOTCH2NLQ7Z3S9 236 aa13.31□□□□□ -0.28
HERPUD2-205ENST00000427455 KRTAP16-1A8MUX0 517 aa13.3□□□□□ -0.28
HERPUD2-205ENST00000427455 NREPQ16612 68 aa13.3□□□□□ -0.28
HERPUD2-205ENST00000427455 NDUFB1O75438 58 aa13.28□□□□□ -0.28
HERPUD2-205ENST00000427455 A8MWP4 228 aa13.25□□□□□ -0.29
HERPUD2-205ENST00000427455 F8W1H4 67 aa13.21□□□□□ -0.29
HERPUD2-205ENST00000427455 IGKV3D-7A0A0C4DH55 119 aa13.19□□□□□ -0.3
HERPUD2-205ENST00000427455 LCE2AQ5TA79 106 aaPredicted RBP13.19□□□□□ -0.3
HERPUD2-205ENST00000427455 PRR15Q8IV56 129 aa13.14□□□□□ -0.31
HERPUD2-205ENST00000427455 C8orf17Q9NRJ1 99 aa13.14□□□□□ -0.31
HERPUD2-205ENST00000427455 KRTAP19-2Q3LHN2 52 aa13.12□□□□□ -0.31
HERPUD2-205ENST00000427455 Q6ZVQ6 151 aa13.12□□□□□ -0.31
HERPUD2-205ENST00000427455 BPY2O14599 106 aa13.1□□□□□ -0.31
HERPUD2-205ENST00000427455 ETDBQ3ZM63 59 aa13.09□□□□□ -0.31
HERPUD2-205ENST00000427455 LCE2CQ5TA81 110 aa13.08□□□□□ -0.32
HERPUD2-205ENST00000427455 K7EQZ3 153 aa13.06□□□□□ -0.32
HERPUD2-205ENST00000427455 LINC00846Q9NV44 126 aa13.06□□□□□ -0.32
HERPUD2-205ENST00000427455 UBL5Q9BZL1 73 aa13.05□□□□□ -0.32
HERPUD2-205ENST00000427455 Q8N9P0 234 aaPredicted RBP13.04□□□□□ -0.32
HERPUD2-205ENST00000427455 MMP24-AS1A0A0U1RRL7 71 aa13.02□□□□□ -0.33
HERPUD2-205ENST00000427455 COX6B2Q6YFQ2 88 aa12.98□□□□□ -0.33
HERPUD2-205ENST00000427455 TMEM254Q8TBM7 123 aa12.98□□□□□ -0.33
HERPUD2-205ENST00000427455 ZCCHC13Q8WW36 166 aaKnown RBP12.98□□□□□ -0.33
HERPUD2-205ENST00000427455 MRPL34Q9BQ48 92 aaKnown RBP12.95□□□□□ -0.34
HERPUD2-205ENST00000427455 hDV103S1A0JD37 113 aa12.94□□□□□ -0.34
HERPUD2-205ENST00000427455 Q8N9L7 120 aa12.94□□□□□ -0.34
HERPUD2-205ENST00000427455 MT1HP80294 61 aa12.91□□□□□ -0.34
HERPUD2-205ENST00000427455 A0A1B0GV90 55 aa12.88□□□□□ -0.35
HERPUD2-205ENST00000427455 FLGP20930 4061 aaPredicted RBP12.83□□□□□ -0.36
HERPUD2-205ENST00000427455 CASC2Q6XLA1 102 aa12.83□□□□□ -0.36
HERPUD2-205ENST00000427455 WFDC13Q8IUB5 93 aa12.83□□□□□ -0.36
HERPUD2-205ENST00000427455 NDUFS5O43920 106 aa12.82□□□□□ -0.36
HERPUD2-205ENST00000427455 ACYP1P07311 99 aa12.8□□□□□ -0.36
HERPUD2-205ENST00000427455 HRES1P13985 223 aa12.8□□□□□ -0.36
HERPUD2-205ENST00000427455 CXCL6P80162 114 aa12.8□□□□□ -0.36
HERPUD2-205ENST00000427455 FAM240AA0A1B0GVK7 77 aa12.78□□□□□ -0.36
HERPUD2-205ENST00000427455 SPINK7P58062 85 aa12.77□□□□□ -0.37
HERPUD2-205ENST00000427455 HCG22E2RYF7 251 aa12.76□□□□□ -0.37
HERPUD2-205ENST00000427455 MPLKIPQ8TAP9 179 aa12.76□□□□□ -0.37
HERPUD2-205ENST00000427455 RBM12B-AS1Q9P1G2 102 aa12.74□□□□□ -0.37
HERPUD2-205ENST00000427455 M0R2T5 61 aa12.72□□□□□ -0.37
HERPUD2-205ENST00000427455 FAM236DA0A1B0GTK5 79 aa12.7□□□□□ -0.38
HERPUD2-205ENST00000427455 FAM236CP0DP71 79 aa12.7□□□□□ -0.38
HERPUD2-205ENST00000427455 ATP5EP2Q5VTU8 51 aa12.63□□□□□ -0.39
HERPUD2-205ENST00000427455 Q5W150 140 aa12.63□□□□□ -0.39
HERPUD2-205ENST00000427455 KRTAP10-6P60371 365 aaPredicted RBP12.6□□□□□ -0.39
HERPUD2-205ENST00000427455 LORP23490 312 aaPredicted RBP12.58□□□□□ -0.4
HERPUD2-205ENST00000427455 IGKV2D-30A0A075B6S6 120 aa12.54□□□□□ -0.4
HERPUD2-205ENST00000427455 IGKV2-30P06310 120 aa12.54□□□□□ -0.4
HERPUD2-205ENST00000427455 C7orf65Q6ZTY9 151 aa12.54□□□□□ -0.4
HERPUD2-205ENST00000427455 LINC00643Q86TS7 51 aa12.51□□□□□ -0.41
HERPUD2-205ENST00000427455 TP53AIP1Q9HCN2 124 aa12.51□□□□□ -0.41
HERPUD2-205ENST00000427455 KRTAP9-2Q9BYQ4 174 aa12.5□□□□□ -0.41
HERPUD2-205ENST00000427455 J3QR89 54 aa12.47□□□□□ -0.41
HERPUD2-205ENST00000427455 HIST1H4AP62805 103 aaKnown RBP12.47□□□□□ -0.41
HERPUD2-205ENST00000427455 LCE2DQ5TA82 110 aaPredicted RBP12.37□□□□□ -0.43
HERPUD2-205ENST00000427455 A0A087WVE0 104 aa12.33□□□□□ -0.44
HERPUD2-205ENST00000427455 H1FX-AS1Q4G0G2 97 aa12.29□□□□□ -0.44
HERPUD2-205ENST00000427455 TRAV22A0A0B4J277 110 aa12.28□□□□□ -0.44
HERPUD2-205ENST00000427455 C4orf26Q17RF5 130 aa12.27□□□□□ -0.45
HERPUD2-205ENST00000427455 KRTAP9-8Q9BYQ0 159 aa12.26□□□□□ -0.45
HERPUD2-205ENST00000427455 UQCRQO14949 82 aa12.23□□□□□ -0.45
HERPUD2-205ENST00000427455 LOC101927531A0A1B0GV80 90 aa12.18□□□□□ -0.46
HERPUD2-205ENST00000427455 K7ERU9 68 aa12.17□□□□□ -0.46
HERPUD2-205ENST00000427455 CYP4F30PQ9H0H9 118 aa12.17□□□□□ -0.46
HERPUD2-205ENST00000427455 ATOX1O00244 68 aa12.15□□□□□ -0.46
HERPUD2-205ENST00000427455 H0Y9P7 68 aa12.14□□□□□ -0.47
HERPUD2-205ENST00000427455 MT2AP02795 61 aa12.14□□□□□ -0.47
HERPUD2-205ENST00000427455 C1orf64Q8NEQ6 169 aa12.1□□□□□ -0.47
HERPUD2-205ENST00000427455 KRTAP3-1Q9BYR8 98 aa12.08□□□□□ -0.48
HERPUD2-205ENST00000427455 OCR1Q9BZK8 76 aa12.08□□□□□ -0.48
HERPUD2-205ENST00000427455 MT1FP04733 61 aa12.05□□□□□ -0.48
HERPUD2-205ENST00000427455 IMUPQ9GZP8 106 aa12.02□□□□□ -0.49
HERPUD2-205ENST00000427455 KRTAP10-10P60014 251 aa12□□□□□ -0.49
HERPUD2-205ENST00000427455 MT-ATP8P03928 68 aa11.98□□□□□ -0.49
HERPUD2-205ENST00000427455 SCGB1A1P11684 91 aa11.98□□□□□ -0.49
HERPUD2-205ENST00000427455 MP68P56378 58 aa11.98□□□□□ -0.49
HERPUD2-205ENST00000427455 LINC00208Q96KT6 92 aa11.97□□□□□ -0.49
HERPUD2-205ENST00000427455 S4R3F8 94 aa11.96□□□□□ -0.49
HERPUD2-205ENST00000427455 FSIP2Q5CZC0 6907 aa11.95□□□□□ -0.5
HERPUD2-205ENST00000427455 KRTAP9-6A0A140TA67 174 aa11.95□□□□□ -0.5
HERPUD2-205ENST00000427455 C5orf47Q569G3 176 aa11.94□□□□□ -0.5
HERPUD2-205ENST00000427455 CRCT1Q9UGL9 99 aa11.88□□□□□ -0.51
HERPUD2-205ENST00000427455 LCA10Q71F78 164 aa11.87□□□□□ -0.51
HERPUD2-205ENST00000427455 KRTAP9-3Q9BYQ3 159 aa11.87□□□□□ -0.51
HERPUD2-205ENST00000427455 H3BPC8 53 aa11.86□□□□□ -0.51
HERPUD2-205ENST00000427455 KLKP1Q107X0 134 aa11.83□□□□□ -0.52
HERPUD2-205ENST00000427455 FAM236AA0A1B0GUQ0 79 aa11.81□□□□□ -0.52
HERPUD2-205ENST00000427455 FAM236BA0A1B0GV22 79 aa11.81□□□□□ -0.52
HERPUD2-205ENST00000427455 CSAG1Q6PB30 78 aa11.81□□□□□ -0.52
HERPUD2-205ENST00000427455 USH2AO75445 5202 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms