RNA–Protein interactions for RNA: ENST00000424766.5

PMS1-211, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 3

Gene PMS1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-211ENST00000424766 A0A1B0GVX0 72 aa11.11□□□□□ -0.63
PMS1-211ENST00000424766 DSCR10P59022 87 aa11.11□□□□□ -0.63
PMS1-211ENST00000424766 NDUFB1O75438 58 aa11.1□□□□□ -0.63
PMS1-211ENST00000424766 RPL37P61927 97 aaKnown RBP11.1□□□□□ -0.63
PMS1-211ENST00000424766 IGHV6-1A0A0B4J1U7 121 aa11.09□□□□□ -0.63
PMS1-211ENST00000424766 A8MWP4 228 aa11.07□□□□□ -0.64
PMS1-211ENST00000424766 C8orf87E5RJ46 101 aa11.07□□□□□ -0.64
PMS1-211ENST00000424766 Q75L30 129 aa11.07□□□□□ -0.64
PMS1-211ENST00000424766 Q6ZVQ6 151 aa11.06□□□□□ -0.64
PMS1-211ENST00000424766 NOTCH2NLQ7Z3S9 236 aa11.05□□□□□ -0.64
PMS1-211ENST00000424766 PCOTHQ58A44 107 aa11.04□□□□□ -0.64
PMS1-211ENST00000424766 C20orf166-AS1Q96NR2 134 aa11.04□□□□□ -0.64
PMS1-211ENST00000424766 LINC00846Q9NV44 126 aa11.04□□□□□ -0.64
PMS1-211ENST00000424766 UBL5Q9BZL1 73 aa11.03□□□□□ -0.64
PMS1-211ENST00000424766 IGKV3D-7A0A0C4DH55 119 aa11.02□□□□□ -0.65
PMS1-211ENST00000424766 A8MUU9 505 aa11.02□□□□□ -0.65
PMS1-211ENST00000424766 KRTAP16-1A8MUX0 517 aa11.02□□□□□ -0.65
PMS1-211ENST00000424766 BPY2O14599 106 aa11.02□□□□□ -0.65
PMS1-211ENST00000424766 PRR15Q8IV56 129 aa11□□□□□ -0.65
PMS1-211ENST00000424766 MUC17Q685J3 4493 aa10.98□□□□□ -0.65
PMS1-211ENST00000424766 ATP11AUNQ6ZP68 121 aa10.97□□□□□ -0.65
PMS1-211ENST00000424766 C8orf17Q9NRJ1 99 aa10.97□□□□□ -0.65
PMS1-211ENST00000424766 KRTAP4-1Q9BYQ7 146 aa10.96□□□□□ -0.65
PMS1-211ENST00000424766 ACYP1P07311 99 aa10.94□□□□□ -0.66
PMS1-211ENST00000424766 RNF213Q63HN8 5207 aa10.92□□□□□ -0.66
PMS1-211ENST00000424766 K7EQZ3 153 aa10.92□□□□□ -0.66
PMS1-211ENST00000424766 FAM240AA0A1B0GVK7 77 aa10.9□□□□□ -0.66
PMS1-211ENST00000424766 MMP24-AS1A0A0U1RRL7 71 aa10.87□□□□□ -0.67
PMS1-211ENST00000424766 A0A0U1RQV1 116 aa10.86□□□□□ -0.67
PMS1-211ENST00000424766 Q8N9P0 234 aaPredicted RBP10.86□□□□□ -0.67
PMS1-211ENST00000424766 TMEM254Q8TBM7 123 aa10.84□□□□□ -0.67
PMS1-211ENST00000424766 CXCL6P80162 114 aa10.83□□□□□ -0.68
PMS1-211ENST00000424766 Q8N9L7 120 aa10.83□□□□□ -0.68
PMS1-211ENST00000424766 hDV103S1A0JD37 113 aa10.82□□□□□ -0.68
PMS1-211ENST00000424766 MRPL34Q9BQ48 92 aaKnown RBP10.81□□□□□ -0.68
PMS1-211ENST00000424766 MUC2Q02817 5179 aa10.78□□□□□ -0.68
PMS1-211ENST00000424766 J3QR89 54 aa10.75□□□□□ -0.69
PMS1-211ENST00000424766 CASC2Q6XLA1 102 aa10.75□□□□□ -0.69
PMS1-211ENST00000424766 ZCCHC13Q8WW36 166 aaKnown RBP10.75□□□□□ -0.69
PMS1-211ENST00000424766 WFDC13Q8IUB5 93 aa10.74□□□□□ -0.69
PMS1-211ENST00000424766 ATP5EP2Q5VTU8 51 aa10.72□□□□□ -0.69
PMS1-211ENST00000424766 HCG22E2RYF7 251 aa10.71□□□□□ -0.69
PMS1-211ENST00000424766 LINC00643Q86TS7 51 aa10.69□□□□□ -0.7
PMS1-211ENST00000424766 NDUFS5O43920 106 aa10.68□□□□□ -0.7
PMS1-211ENST00000424766 KRTAP19-2Q3LHN2 52 aa10.63□□□□□ -0.71
PMS1-211ENST00000424766 LCE2CQ5TA81 110 aa10.59□□□□□ -0.71
PMS1-211ENST00000424766 HIST1H4AP62805 103 aaKnown RBP10.57□□□□□ -0.72
PMS1-211ENST00000424766 SPINK7P58062 85 aa10.56□□□□□ -0.72
PMS1-211ENST00000424766 LCE2AQ5TA79 106 aaPredicted RBP10.55□□□□□ -0.72
PMS1-211ENST00000424766 Q5W150 140 aa10.55□□□□□ -0.72
PMS1-211ENST00000424766 K7ERU9 68 aa10.54□□□□□ -0.72
PMS1-211ENST00000424766 COX6B2Q6YFQ2 88 aa10.53□□□□□ -0.72
PMS1-211ENST00000424766 TP53AIP1Q9HCN2 124 aa10.53□□□□□ -0.72
PMS1-211ENST00000424766 HRES1P13985 223 aa10.52□□□□□ -0.73
PMS1-211ENST00000424766 FAT4Q6V0I7 4981 aa10.51□□□□□ -0.73
PMS1-211ENST00000424766 MPLKIPQ8TAP9 179 aa10.49□□□□□ -0.73
PMS1-211ENST00000424766 RBM12B-AS1Q9P1G2 102 aa10.47□□□□□ -0.73
PMS1-211ENST00000424766 A0A087WVE0 104 aa10.45□□□□□ -0.74
PMS1-211ENST00000424766 MT1HP80294 61 aa10.42□□□□□ -0.74
PMS1-211ENST00000424766 C7orf65Q6ZTY9 151 aa10.41□□□□□ -0.74
PMS1-211ENST00000424766 IGKV2D-30A0A075B6S6 120 aa10.4□□□□□ -0.74
PMS1-211ENST00000424766 IGKV2-30P06310 120 aa10.4□□□□□ -0.74
PMS1-211ENST00000424766 FAM236DA0A1B0GTK5 79 aa10.38□□□□□ -0.75
PMS1-211ENST00000424766 FAM236CP0DP71 79 aa10.38□□□□□ -0.75
PMS1-211ENST00000424766 IMUPQ9GZP8 106 aa10.35□□□□□ -0.75
PMS1-211ENST00000424766 UQCRQO14949 82 aa10.34□□□□□ -0.75
PMS1-211ENST00000424766 TRAV22A0A0B4J277 110 aa10.31□□□□□ -0.76
PMS1-211ENST00000424766 MT-ATP8P03928 68 aa10.3□□□□□ -0.76
PMS1-211ENST00000424766 M0R2T5 61 aa10.27□□□□□ -0.77
PMS1-211ENST00000424766 OCR1Q9BZK8 76 aa10.25□□□□□ -0.77
PMS1-211ENST00000424766 ATOX1O00244 68 aa10.23□□□□□ -0.77
PMS1-211ENST00000424766 LOC101927531A0A1B0GV80 90 aa10.22□□□□□ -0.77
PMS1-211ENST00000424766 H0Y9P7 68 aa10.22□□□□□ -0.77
PMS1-211ENST00000424766 SCGB1A1P11684 91 aa10.22□□□□□ -0.77
PMS1-211ENST00000424766 FLGP20930 4061 aaPredicted RBP10.21□□□□□ -0.77
PMS1-211ENST00000424766 CYP4F30PQ9H0H9 118 aa10.21□□□□□ -0.77
PMS1-211ENST00000424766 C4orf26Q17RF5 130 aa10.19□□□□□ -0.78
PMS1-211ENST00000424766 KRTAP10-6P60371 365 aaPredicted RBP10.16□□□□□ -0.78
PMS1-211ENST00000424766 H1FX-AS1Q4G0G2 97 aa10.16□□□□□ -0.78
PMS1-211ENST00000424766 C5orf47Q569G3 176 aa10.16□□□□□ -0.78
PMS1-211ENST00000424766 LORP23490 312 aaPredicted RBP10.13□□□□□ -0.79
PMS1-211ENST00000424766 MP68P56378 58 aa10.13□□□□□ -0.79
PMS1-211ENST00000424766 C1orf64Q8NEQ6 169 aa10.12□□□□□ -0.79
PMS1-211ENST00000424766 FAM236AA0A1B0GUQ0 79 aa10.1□□□□□ -0.79
PMS1-211ENST00000424766 FAM236BA0A1B0GV22 79 aa10.1□□□□□ -0.79
PMS1-211ENST00000424766 LINC00208Q96KT6 92 aa10.1□□□□□ -0.79
PMS1-211ENST00000424766 H3BPC8 53 aa10.08□□□□□ -0.8
PMS1-211ENST00000424766 SMIM20Q8N5G0 67 aa10.08□□□□□ -0.8
PMS1-211ENST00000424766 KRTAP3-1Q9BYR8 98 aa10.05□□□□□ -0.8
PMS1-211ENST00000424766 TRAV7A0A075B6U4 112 aa10.02□□□□□ -0.81
PMS1-211ENST00000424766 KLKP1Q107X0 134 aa9.97□□□□□ -0.81
PMS1-211ENST00000424766 KRTAP9-8Q9BYQ0 159 aa9.95□□□□□ -0.82
PMS1-211ENST00000424766 S4R3F8 94 aa9.9□□□□□ -0.82
PMS1-211ENST00000424766 A8MUN3 132 aa9.86□□□□□ -0.83
PMS1-211ENST00000424766 SERP2Q8N6R1 65 aa9.85□□□□□ -0.83
PMS1-211ENST00000424766 KRTAP9-2Q9BYQ4 174 aa9.84□□□□□ -0.83
PMS1-211ENST00000424766 MT2AP02795 61 aa9.83□□□□□ -0.84
PMS1-211ENST00000424766 LCA10Q71F78 164 aa9.83□□□□□ -0.84
PMS1-211ENST00000424766 CSAG1Q6PB30 78 aa9.79□□□□□ -0.84
PMS1-211ENST00000424766 MT1FP04733 61 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms