RNA–Protein interactions for RNA: ENST00000420166.5

HMGXB4-203, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 1,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-203ENST00000420166 LINC00313P59037 77 aa11.03□□□□□ -0.64
HMGXB4-203ENST00000420166 IGHV6-1A0A0B4J1U7 121 aa11.02□□□□□ -0.65
HMGXB4-203ENST00000420166 F8W1H4 67 aa11.02□□□□□ -0.65
HMGXB4-203ENST00000420166 NREPQ16612 68 aa11.02□□□□□ -0.65
HMGXB4-203ENST00000420166 A0A1B0GVX0 72 aa11.01□□□□□ -0.65
HMGXB4-203ENST00000420166 NOTCH2NLQ7Z3S9 236 aa11□□□□□ -0.65
HMGXB4-203ENST00000420166 C20orf166-AS1Q96NR2 134 aa11□□□□□ -0.65
HMGXB4-203ENST00000420166 A0A0U1RQV1 116 aa10.99□□□□□ -0.65
HMGXB4-203ENST00000420166 A8MUU9 505 aa10.98□□□□□ -0.65
HMGXB4-203ENST00000420166 KRTAP16-1A8MUX0 517 aa10.97□□□□□ -0.65
HMGXB4-203ENST00000420166 C8orf87E5RJ46 101 aa10.97□□□□□ -0.65
HMGXB4-203ENST00000420166 NDUFB1O75438 58 aa10.96□□□□□ -0.65
HMGXB4-203ENST00000420166 A8MWP4 228 aa10.95□□□□□ -0.66
HMGXB4-203ENST00000420166 ATP11AUNQ6ZP68 121 aa10.94□□□□□ -0.66
HMGXB4-203ENST00000420166 ETDBQ3ZM63 59 aa10.93□□□□□ -0.66
HMGXB4-203ENST00000420166 IGKV3D-7A0A0C4DH55 119 aa10.91□□□□□ -0.66
HMGXB4-203ENST00000420166 Q6ZVQ6 151 aa10.9□□□□□ -0.66
HMGXB4-203ENST00000420166 PRR15Q8IV56 129 aa10.87□□□□□ -0.67
HMGXB4-203ENST00000420166 C8orf17Q9NRJ1 99 aa10.87□□□□□ -0.67
HMGXB4-203ENST00000420166 BPY2O14599 106 aa10.86□□□□□ -0.67
HMGXB4-203ENST00000420166 LINC00846Q9NV44 126 aa10.86□□□□□ -0.67
HMGXB4-203ENST00000420166 FAT4Q6V0I7 4981 aa10.84□□□□□ -0.67
HMGXB4-203ENST00000420166 A0A1B0GV90 55 aa10.83□□□□□ -0.68
HMGXB4-203ENST00000420166 UBL5Q9BZL1 73 aa10.82□□□□□ -0.68
HMGXB4-203ENST00000420166 K7EQZ3 153 aa10.81□□□□□ -0.68
HMGXB4-203ENST00000420166 MMP24-AS1A0A0U1RRL7 71 aa10.77□□□□□ -0.69
HMGXB4-203ENST00000420166 Q8N9P0 234 aaPredicted RBP10.76□□□□□ -0.69
HMGXB4-203ENST00000420166 KRTAP19-2Q3LHN2 52 aa10.74□□□□□ -0.69
HMGXB4-203ENST00000420166 Q8N9L7 120 aa10.73□□□□□ -0.69
HMGXB4-203ENST00000420166 LCE2AQ5TA79 106 aaPredicted RBP10.72□□□□□ -0.69
HMGXB4-203ENST00000420166 TMEM254Q8TBM7 123 aa10.72□□□□□ -0.69
HMGXB4-203ENST00000420166 hDV103S1A0JD37 113 aa10.7□□□□□ -0.7
HMGXB4-203ENST00000420166 LCE2CQ5TA81 110 aa10.7□□□□□ -0.7
HMGXB4-203ENST00000420166 ZCCHC13Q8WW36 166 aaKnown RBP10.69□□□□□ -0.7
HMGXB4-203ENST00000420166 MRPL34Q9BQ48 92 aaKnown RBP10.69□□□□□ -0.7
HMGXB4-203ENST00000420166 ACYP1P07311 99 aa10.66□□□□□ -0.7
HMGXB4-203ENST00000420166 FAM240AA0A1B0GVK7 77 aa10.65□□□□□ -0.7
HMGXB4-203ENST00000420166 CXCL6P80162 114 aa10.63□□□□□ -0.71
HMGXB4-203ENST00000420166 WFDC13Q8IUB5 93 aa10.63□□□□□ -0.71
HMGXB4-203ENST00000420166 CASC2Q6XLA1 102 aa10.62□□□□□ -0.71
HMGXB4-203ENST00000420166 COX6B2Q6YFQ2 88 aa10.6□□□□□ -0.71
HMGXB4-203ENST00000420166 NDUFS5O43920 106 aa10.58□□□□□ -0.72
HMGXB4-203ENST00000420166 HCG22E2RYF7 251 aa10.57□□□□□ -0.72
HMGXB4-203ENST00000420166 MT1HP80294 61 aa10.53□□□□□ -0.72
HMGXB4-203ENST00000420166 HRES1P13985 223 aa10.52□□□□□ -0.73
HMGXB4-203ENST00000420166 SPINK7P58062 85 aa10.51□□□□□ -0.73
HMGXB4-203ENST00000420166 ATP5EP2Q5VTU8 51 aa10.51□□□□□ -0.73
HMGXB4-203ENST00000420166 MPLKIPQ8TAP9 179 aa10.48□□□□□ -0.73
HMGXB4-203ENST00000420166 Q5W150 140 aa10.45□□□□□ -0.74
HMGXB4-203ENST00000420166 RBM12B-AS1Q9P1G2 102 aa10.44□□□□□ -0.74
HMGXB4-203ENST00000420166 J3QR89 54 aa10.43□□□□□ -0.74
HMGXB4-203ENST00000420166 LINC00643Q86TS7 51 aa10.42□□□□□ -0.74
HMGXB4-203ENST00000420166 FAM236DA0A1B0GTK5 79 aa10.4□□□□□ -0.74
HMGXB4-203ENST00000420166 FAM236CP0DP71 79 aa10.4□□□□□ -0.74
HMGXB4-203ENST00000420166 FLGP20930 4061 aaPredicted RBP10.37□□□□□ -0.75
HMGXB4-203ENST00000420166 HIST1H4AP62805 103 aaKnown RBP10.37□□□□□ -0.75
HMGXB4-203ENST00000420166 M0R2T5 61 aa10.36□□□□□ -0.75
HMGXB4-203ENST00000420166 TP53AIP1Q9HCN2 124 aa10.35□□□□□ -0.75
HMGXB4-203ENST00000420166 IGKV2D-30A0A075B6S6 120 aa10.34□□□□□ -0.75
HMGXB4-203ENST00000420166 IGKV2-30P06310 120 aa10.34□□□□□ -0.75
HMGXB4-203ENST00000420166 C7orf65Q6ZTY9 151 aa10.34□□□□□ -0.75
HMGXB4-203ENST00000420166 KRTAP9-2Q9BYQ4 174 aa10.34□□□□□ -0.75
HMGXB4-203ENST00000420166 A0A087WVE0 104 aa10.27□□□□□ -0.77
HMGXB4-203ENST00000420166 KRTAP10-6P60371 365 aaPredicted RBP10.27□□□□□ -0.77
HMGXB4-203ENST00000420166 LORP23490 312 aaPredicted RBP10.25□□□□□ -0.77
HMGXB4-203ENST00000420166 LCE2DQ5TA82 110 aaPredicted RBP10.23□□□□□ -0.77
HMGXB4-203ENST00000420166 K7ERU9 68 aa10.2□□□□□ -0.78
HMGXB4-203ENST00000420166 TRAV22A0A0B4J277 110 aa10.18□□□□□ -0.78
HMGXB4-203ENST00000420166 UQCRQO14949 82 aa10.15□□□□□ -0.78
HMGXB4-203ENST00000420166 KRTAP9-6A0A140TA67 174 aa10.14□□□□□ -0.79
HMGXB4-203ENST00000420166 C4orf26Q17RF5 130 aa10.12□□□□□ -0.79
HMGXB4-203ENST00000420166 H1FX-AS1Q4G0G2 97 aa10.1□□□□□ -0.79
HMGXB4-203ENST00000420166 LOC101927531A0A1B0GV80 90 aa10.07□□□□□ -0.8
HMGXB4-203ENST00000420166 H0Y9P7 68 aa10.07□□□□□ -0.8
HMGXB4-203ENST00000420166 CYP4F30PQ9H0H9 118 aa10.07□□□□□ -0.8
HMGXB4-203ENST00000420166 ATOX1O00244 68 aa10.05□□□□□ -0.8
HMGXB4-203ENST00000420166 OCR1Q9BZK8 76 aa10.05□□□□□ -0.8
HMGXB4-203ENST00000420166 MT-ATP8P03928 68 aa10.04□□□□□ -0.8
HMGXB4-203ENST00000420166 IMUPQ9GZP8 106 aa10.03□□□□□ -0.8
HMGXB4-203ENST00000420166 KRTAP9-8Q9BYQ0 159 aa10.02□□□□□ -0.81
HMGXB4-203ENST00000420166 C1orf64Q8NEQ6 169 aa9.98□□□□□ -0.81
HMGXB4-203ENST00000420166 KRTAP3-1Q9BYR8 98 aa9.98□□□□□ -0.81
HMGXB4-203ENST00000420166 SCGB1A1P11684 91 aa9.97□□□□□ -0.81
HMGXB4-203ENST00000420166 MP68P56378 58 aa9.94□□□□□ -0.82
HMGXB4-203ENST00000420166 LINC00208Q96KT6 92 aa9.94□□□□□ -0.82
HMGXB4-203ENST00000420166 MT2AP02795 61 aa9.93□□□□□ -0.82
HMGXB4-203ENST00000420166 C5orf47Q569G3 176 aa9.92□□□□□ -0.82
HMGXB4-203ENST00000420166 FAM236AA0A1B0GUQ0 79 aa9.87□□□□□ -0.83
HMGXB4-203ENST00000420166 FAM236BA0A1B0GV22 79 aa9.87□□□□□ -0.83
HMGXB4-203ENST00000420166 MT1FP04733 61 aa9.86□□□□□ -0.83
HMGXB4-203ENST00000420166 H3BPC8 53 aa9.85□□□□□ -0.83
HMGXB4-203ENST00000420166 S4R3F8 94 aa9.85□□□□□ -0.83
HMGXB4-203ENST00000420166 KLKP1Q107X0 134 aa9.83□□□□□ -0.84
HMGXB4-203ENST00000420166 KRTAP10-10P60014 251 aa9.81□□□□□ -0.84
HMGXB4-203ENST00000420166 SMIM20Q8N5G0 67 aa9.8□□□□□ -0.84
HMGXB4-203ENST00000420166 LCA10Q71F78 164 aa9.78□□□□□ -0.84
HMGXB4-203ENST00000420166 TRAV7A0A075B6U4 112 aa9.77□□□□□ -0.85
HMGXB4-203ENST00000420166 A8MUN3 132 aa9.71□□□□□ -0.86
HMGXB4-203ENST00000420166 CSAG1Q6PB30 78 aa9.71□□□□□ -0.86
HMGXB4-203ENST00000420166 KRTAP3-3Q9BYR6 98 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms