RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 PRO0461Q9UI25 63 aa12.39□□□□□ -0.43
SMARCB1-205ENST00000417137 DSCR10P59022 87 aa12.38□□□□□ -0.43
SMARCB1-205ENST00000417137 NREPQ16612 68 aa12.37□□□□□ -0.43
SMARCB1-205ENST00000417137 IGHV6-1A0A0B4J1U7 121 aa12.35□□□□□ -0.43
SMARCB1-205ENST00000417137 NDUFB1O75438 58 aa12.34□□□□□ -0.43
SMARCB1-205ENST00000417137 ATP11AUNQ6ZP68 121 aa12.34□□□□□ -0.43
SMARCB1-205ENST00000417137 A0A1B0GVX0 72 aa12.33□□□□□ -0.44
SMARCB1-205ENST00000417137 F8W1H4 67 aa12.33□□□□□ -0.44
SMARCB1-205ENST00000417137 KRTAP4-1Q9BYQ7 146 aa12.33□□□□□ -0.44
SMARCB1-205ENST00000417137 LCE2AQ5TA79 106 aaPredicted RBP12.32□□□□□ -0.44
SMARCB1-205ENST00000417137 C20orf166-AS1Q96NR2 134 aa12.32□□□□□ -0.44
SMARCB1-205ENST00000417137 C8orf87E5RJ46 101 aa12.31□□□□□ -0.44
SMARCB1-205ENST00000417137 A8MUU9 505 aa12.29□□□□□ -0.44
SMARCB1-205ENST00000417137 FAT4Q6V0I7 4981 aa12.27□□□□□ -0.45
SMARCB1-205ENST00000417137 A8MWP4 228 aa12.26□□□□□ -0.45
SMARCB1-205ENST00000417137 NOTCH2NLQ7Z3S9 236 aa12.26□□□□□ -0.45
SMARCB1-205ENST00000417137 KRTAP9-6A0A140TA67 174 aa12.24□□□□□ -0.45
SMARCB1-205ENST00000417137 KRTAP16-1A8MUX0 517 aa12.23□□□□□ -0.45
SMARCB1-205ENST00000417137 IGKV3D-7A0A0C4DH55 119 aa12.18□□□□□ -0.46
SMARCB1-205ENST00000417137 ETDBQ3ZM63 59 aa12.18□□□□□ -0.46
SMARCB1-205ENST00000417137 BPY2O14599 106 aa12.17□□□□□ -0.46
SMARCB1-205ENST00000417137 PRR15Q8IV56 129 aa12.17□□□□□ -0.46
SMARCB1-205ENST00000417137 Q6ZVQ6 151 aa12.16□□□□□ -0.46
SMARCB1-205ENST00000417137 C8orf17Q9NRJ1 99 aa12.15□□□□□ -0.46
SMARCB1-205ENST00000417137 UBL5Q9BZL1 73 aa12.14□□□□□ -0.47
SMARCB1-205ENST00000417137 LINC00846Q9NV44 126 aa12.11□□□□□ -0.47
SMARCB1-205ENST00000417137 K7EQZ3 153 aa12.06□□□□□ -0.48
SMARCB1-205ENST00000417137 Q8N9P0 234 aaPredicted RBP12.05□□□□□ -0.48
SMARCB1-205ENST00000417137 MMP24-AS1A0A0U1RRL7 71 aa12.01□□□□□ -0.49
SMARCB1-205ENST00000417137 A0A1B0GV90 55 aa12.01□□□□□ -0.49
SMARCB1-205ENST00000417137 TMEM254Q8TBM7 123 aa12□□□□□ -0.49
SMARCB1-205ENST00000417137 hDV103S1A0JD37 113 aa11.99□□□□□ -0.49
SMARCB1-205ENST00000417137 ZCCHC13Q8WW36 166 aaKnown RBP11.98□□□□□ -0.49
SMARCB1-205ENST00000417137 MRPL34Q9BQ48 92 aaKnown RBP11.98□□□□□ -0.49
SMARCB1-205ENST00000417137 KRTAP19-2Q3LHN2 52 aa11.96□□□□□ -0.49
SMARCB1-205ENST00000417137 ACYP1P07311 99 aa11.95□□□□□ -0.5
SMARCB1-205ENST00000417137 COX6B2Q6YFQ2 88 aa11.95□□□□□ -0.5
SMARCB1-205ENST00000417137 Q8N9L7 120 aa11.95□□□□□ -0.5
SMARCB1-205ENST00000417137 LCE2CQ5TA81 110 aa11.93□□□□□ -0.5
SMARCB1-205ENST00000417137 NDUFS5O43920 106 aa11.89□□□□□ -0.51
SMARCB1-205ENST00000417137 CXCL6P80162 114 aa11.89□□□□□ -0.51
SMARCB1-205ENST00000417137 CASC2Q6XLA1 102 aa11.89□□□□□ -0.51
SMARCB1-205ENST00000417137 FAM240AA0A1B0GVK7 77 aa11.88□□□□□ -0.51
SMARCB1-205ENST00000417137 WFDC13Q8IUB5 93 aa11.87□□□□□ -0.51
SMARCB1-205ENST00000417137 LCE2DQ5TA82 110 aaPredicted RBP11.85□□□□□ -0.51
SMARCB1-205ENST00000417137 HCG22E2RYF7 251 aa11.82□□□□□ -0.52
SMARCB1-205ENST00000417137 SPINK7P58062 85 aa11.8□□□□□ -0.52
SMARCB1-205ENST00000417137 MT1HP80294 61 aa11.79□□□□□ -0.52
SMARCB1-205ENST00000417137 RBM12B-AS1Q9P1G2 102 aa11.78□□□□□ -0.52
SMARCB1-205ENST00000417137 HRES1P13985 223 aa11.75□□□□□ -0.53
SMARCB1-205ENST00000417137 FSIP2Q5CZC0 6907 aa11.75□□□□□ -0.53
SMARCB1-205ENST00000417137 ATP5EP2Q5VTU8 51 aa11.74□□□□□ -0.53
SMARCB1-205ENST00000417137 CRCT1Q9UGL9 99 aa11.73□□□□□ -0.53
SMARCB1-205ENST00000417137 FAM236DA0A1B0GTK5 79 aa11.72□□□□□ -0.53
SMARCB1-205ENST00000417137 FAM236CP0DP71 79 aa11.72□□□□□ -0.53
SMARCB1-205ENST00000417137 M0R2T5 61 aa11.7□□□□□ -0.54
SMARCB1-205ENST00000417137 MPLKIPQ8TAP9 179 aa11.7□□□□□ -0.54
SMARCB1-205ENST00000417137 J3QR89 54 aa11.69□□□□□ -0.54
SMARCB1-205ENST00000417137 Q5W150 140 aa11.66□□□□□ -0.54
SMARCB1-205ENST00000417137 LINC00643Q86TS7 51 aa11.66□□□□□ -0.54
SMARCB1-205ENST00000417137 TP53AIP1Q9HCN2 124 aa11.63□□□□□ -0.55
SMARCB1-205ENST00000417137 HIST1H4AP62805 103 aaKnown RBP11.61□□□□□ -0.55
SMARCB1-205ENST00000417137 IGKV2D-30A0A075B6S6 120 aa11.59□□□□□ -0.55
SMARCB1-205ENST00000417137 IGKV2-30P06310 120 aa11.59□□□□□ -0.55
SMARCB1-205ENST00000417137 C7orf65Q6ZTY9 151 aa11.59□□□□□ -0.55
SMARCB1-205ENST00000417137 FLGP20930 4061 aaPredicted RBP11.55□□□□□ -0.56
SMARCB1-205ENST00000417137 KRTAP10-6P60371 365 aaPredicted RBP11.52□□□□□ -0.57
SMARCB1-205ENST00000417137 LORP23490 312 aaPredicted RBP11.47□□□□□ -0.57
SMARCB1-205ENST00000417137 A0A087WVE0 104 aa11.42□□□□□ -0.58
SMARCB1-205ENST00000417137 K7ERU9 68 aa11.39□□□□□ -0.59
SMARCB1-205ENST00000417137 UQCRQO14949 82 aa11.38□□□□□ -0.59
SMARCB1-205ENST00000417137 TRAV22A0A0B4J277 110 aa11.37□□□□□ -0.59
SMARCB1-205ENST00000417137 H1FX-AS1Q4G0G2 97 aa11.36□□□□□ -0.59
SMARCB1-205ENST00000417137 C4orf26Q17RF5 130 aa11.33□□□□□ -0.6
SMARCB1-205ENST00000417137 LOC101927531A0A1B0GV80 90 aa11.3□□□□□ -0.6
SMARCB1-205ENST00000417137 ATOX1O00244 68 aa11.29□□□□□ -0.6
SMARCB1-205ENST00000417137 CYP4F30PQ9H0H9 118 aa11.28□□□□□ -0.6
SMARCB1-205ENST00000417137 H0Y9P7 68 aa11.26□□□□□ -0.61
SMARCB1-205ENST00000417137 IMUPQ9GZP8 106 aa11.23□□□□□ -0.61
SMARCB1-205ENST00000417137 SCGB1A1P11684 91 aa11.21□□□□□ -0.61
SMARCB1-205ENST00000417137 C1orf64Q8NEQ6 169 aa11.21□□□□□ -0.61
SMARCB1-205ENST00000417137 KRTAP9-8Q9BYQ0 159 aa11.21□□□□□ -0.61
SMARCB1-205ENST00000417137 OCR1Q9BZK8 76 aa11.2□□□□□ -0.62
SMARCB1-205ENST00000417137 MP68P56378 58 aa11.17□□□□□ -0.62
SMARCB1-205ENST00000417137 MT-ATP8P03928 68 aa11.15□□□□□ -0.62
SMARCB1-205ENST00000417137 C5orf47Q569G3 176 aa11.15□□□□□ -0.62
SMARCB1-205ENST00000417137 KRTAP3-1Q9BYR8 98 aa11.13□□□□□ -0.63
SMARCB1-205ENST00000417137 LINC00208Q96KT6 92 aa11.12□□□□□ -0.63
SMARCB1-205ENST00000417137 MT2AP02795 61 aa11.09□□□□□ -0.63
SMARCB1-205ENST00000417137 H3BPC8 53 aa11.05□□□□□ -0.64
SMARCB1-205ENST00000417137 S4R3F8 94 aa11.05□□□□□ -0.64
SMARCB1-205ENST00000417137 KRTAP10-10P60014 251 aa11.04□□□□□ -0.64
SMARCB1-205ENST00000417137 MT1FP04733 61 aa11□□□□□ -0.65
SMARCB1-205ENST00000417137 SMIM20Q8N5G0 67 aa11□□□□□ -0.65
SMARCB1-205ENST00000417137 FAM236AA0A1B0GUQ0 79 aa10.98□□□□□ -0.65
SMARCB1-205ENST00000417137 FAM236BA0A1B0GV22 79 aa10.98□□□□□ -0.65
SMARCB1-205ENST00000417137 KRTAP9-7A8MTY7 169 aa10.96□□□□□ -0.65
SMARCB1-205ENST00000417137 KLKP1Q107X0 134 aa10.96□□□□□ -0.65
SMARCB1-205ENST00000417137 CSAG1Q6PB30 78 aa10.95□□□□□ -0.66
SMARCB1-205ENST00000417137 LCA10Q71F78 164 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms