RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, human

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NIF3L1-206	ENST00000416651	C20orf166-AS1	Q96NR2	134 aa		4.23	□□□□□ -1.73
NIF3L1-206	ENST00000416651	KRTAP2-3	P0C7H8	128 aa		4.22	□□□□□ -1.73
NIF3L1-206	ENST00000416651	C5orf47	Q569G3	176 aa		4.22	□□□□□ -1.73
NIF3L1-206	ENST00000416651	MIR7-3HG	Q8N6C7	128 aa		4.22	□□□□□ -1.73
NIF3L1-206	ENST00000416651	KRTAP2-4	Q9BYR9	128 aa		4.22	□□□□□ -1.73
NIF3L1-206	ENST00000416651	TMEM170B	Q5T4T1	132 aa		4.21	□□□□□ -1.74
NIF3L1-206	ENST00000416651	ATP11AUN	Q6ZP68	121 aa		4.21	□□□□□ -1.74
NIF3L1-206	ENST00000416651	COPS9	Q8WXC6	57 aa		4.21	□□□□□ -1.74
NIF3L1-206	ENST00000416651	PRO1854	Q9UHT4	67 aa		4.21	□□□□□ -1.74
NIF3L1-206	ENST00000416651	C11orf86	A6NJI1	115 aa		4.2	□□□□□ -1.74
NIF3L1-206	ENST00000416651	OBSCN-AS1	Q96MR7	158 aa		4.2	□□□□□ -1.74
NIF3L1-206	ENST00000416651	TTTY13	Q9BZ97	58 aa		4.2	□□□□□ -1.74
NIF3L1-206	ENST00000416651	PRO0461	Q9UI25	63 aa		4.2	□□□□□ -1.74
NIF3L1-206	ENST00000416651	KRTAP16-1	A8MUX0	517 aa		4.19	□□□□□ -1.74
NIF3L1-206	ENST00000416651	LEPROT	O15243	131 aa		4.19	□□□□□ -1.74
NIF3L1-206	ENST00000416651	IFITM1	P13164	125 aa		4.19	□□□□□ -1.74
NIF3L1-206	ENST00000416651	SPRR1B	P22528	89 aa		4.19	□□□□□ -1.74
NIF3L1-206	ENST00000416651		Q6ZVQ6	151 aa		4.19	□□□□□ -1.74
NIF3L1-206	ENST00000416651		A0A0B4J2C4	111 aa		4.18	□□□□□ -1.74
NIF3L1-206	ENST00000416651		C9JAW5	83 aa		4.18	□□□□□ -1.74
NIF3L1-206	ENST00000416651		J3QQQ9	107 aa		4.18	□□□□□ -1.74
NIF3L1-206	ENST00000416651	MT-ATP8	P03928	68 aa		4.18	□□□□□ -1.74
NIF3L1-206	ENST00000416651		Q5XG85	94 aa		4.18	□□□□□ -1.74
NIF3L1-206	ENST00000416651	ANKRD29	Q8N6D5	301 aa		4.18	□□□□□ -1.74
NIF3L1-206	ENST00000416651	SPANXC	Q9NY87	97 aa		4.18	□□□□□ -1.74
NIF3L1-206	ENST00000416651	TCL1B	O95988	128 aa		4.17	□□□□□ -1.74
NIF3L1-206	ENST00000416651	CD164	Q04900	197 aa		4.17	□□□□□ -1.74
NIF3L1-206	ENST00000416651	TRBV10-2	A0A0K0K1G8	114 aa		4.16	□□□□□ -1.74
NIF3L1-206	ENST00000416651		H3BT86	120 aa		4.16	□□□□□ -1.74
NIF3L1-206	ENST00000416651	ACYP1	P07311	99 aa		4.16	□□□□□ -1.74
NIF3L1-206	ENST00000416651	SFTA2	Q6UW10	78 aa		4.16	□□□□□ -1.74
NIF3L1-206	ENST00000416651		V9GYY9	64 aa		4.16	□□□□□ -1.74
NIF3L1-206	ENST00000416651	FAM236D	A0A1B0GTK5	79 aa		4.15	□□□□□ -1.75
NIF3L1-206	ENST00000416651	FAM236C	P0DP71	79 aa		4.15	□□□□□ -1.75
NIF3L1-206	ENST00000416651	NDUFV3	P56181	108 aa	Known RBP	4.15	□□□□□ -1.75
NIF3L1-206	ENST00000416651	MEIG1	Q5JSS6	88 aa		4.15	□□□□□ -1.75
NIF3L1-206	ENST00000416651	DEFB105A	Q8NG35	78 aa		4.15	□□□□□ -1.75
NIF3L1-206	ENST00000416651	SS18L2	Q9UHA2	77 aa		4.15	□□□□□ -1.75
NIF3L1-206	ENST00000416651	LAMTOR3	Q9UHA4	124 aa		4.14	□□□□□ -1.75
NIF3L1-206	ENST00000416651	TRAV23DV6	A0A075B6W5	121 aa		4.13	□□□□□ -1.75
NIF3L1-206	ENST00000416651	FAM240A	A0A1B0GVK7	77 aa		4.13	□□□□□ -1.75
NIF3L1-206	ENST00000416651	TMEM223	A0PJW6	202 aa		4.13	□□□□□ -1.75
NIF3L1-206	ENST00000416651	ZNF73	O43830	326 aa	Predicted RBP	4.13	□□□□□ -1.75
NIF3L1-206	ENST00000416651	HRES1	P13985	223 aa		4.13	□□□□□ -1.75
NIF3L1-206	ENST00000416651	MUSTN1	Q8IVN3	82 aa		4.12	□□□□□ -1.75
NIF3L1-206	ENST00000416651		Q96NJ1	140 aa		4.12	□□□□□ -1.75
NIF3L1-206	ENST00000416651	IMUP	Q9GZP8	106 aa		4.12	□□□□□ -1.75
NIF3L1-206	ENST00000416651	TIMM17B	O60830	172 aa		4.11	□□□□□ -1.75
NIF3L1-206	ENST00000416651	SOSTDC1	Q6X4U4	206 aa		4.11	□□□□□ -1.75
NIF3L1-206	ENST00000416651		A0A0J9YXY3	114 aa		4.1	□□□□□ -1.75
NIF3L1-206	ENST00000416651	TSPEAR-AS2	P59090	65 aa		4.1	□□□□□ -1.75
NIF3L1-206	ENST00000416651	S100A7L2	Q5SY68	101 aa		4.1	□□□□□ -1.75
NIF3L1-206	ENST00000416651	OBSCN	Q5VST9	7968 aa		4.1	□□□□□ -1.75
NIF3L1-206	ENST00000416651	NPC2	P61916	151 aa		4.09	□□□□□ -1.75
NIF3L1-206	ENST00000416651		A8MUU9	505 aa		4.08	□□□□□ -1.76
NIF3L1-206	ENST00000416651	LST1	O00453	97 aa		4.08	□□□□□ -1.76
NIF3L1-206	ENST00000416651	DNAL4	O96015	105 aa		4.08	□□□□□ -1.76
NIF3L1-206	ENST00000416651	LINC00643	Q86TS7	51 aa		4.08	□□□□□ -1.76
NIF3L1-206	ENST00000416651	TRBV7-7	A0A0K0K1E9	115 aa		4.07	□□□□□ -1.76
NIF3L1-206	ENST00000416651	TEX49	A0A1B0GTD5	131 aa		4.07	□□□□□ -1.76
NIF3L1-206	ENST00000416651	IGFL1	Q6UW32	110 aa		4.07	□□□□□ -1.76
NIF3L1-206	ENST00000416651	SMIM20	Q8N5G0	67 aa		4.07	□□□□□ -1.76
NIF3L1-206	ENST00000416651	TRAV13-2	A0A0B4J235	113 aa		4.06	□□□□□ -1.76
NIF3L1-206	ENST00000416651		A6NN06	94 aa		4.06	□□□□□ -1.76
NIF3L1-206	ENST00000416651	CCDC179	H3BU77	68 aa		4.06	□□□□□ -1.76
NIF3L1-206	ENST00000416651	ATOX1	O00244	68 aa		4.06	□□□□□ -1.76
NIF3L1-206	ENST00000416651	UQCRQ	O14949	82 aa		4.06	□□□□□ -1.76
NIF3L1-206	ENST00000416651	OR13C6P	Q8NH95	151 aa		4.06	□□□□□ -1.76
NIF3L1-206	ENST00000416651	KRTAP2-1	Q9BYU5	128 aa		4.06	□□□□□ -1.76
NIF3L1-206	ENST00000416651	FAM236A	A0A1B0GUQ0	79 aa		4.05	□□□□□ -1.76
NIF3L1-206	ENST00000416651	FAM236B	A0A1B0GV22	79 aa		4.05	□□□□□ -1.76
NIF3L1-206	ENST00000416651		J3KT08	172 aa		4.05	□□□□□ -1.76
NIF3L1-206	ENST00000416651	TRAC	P01848	142 aa		4.05	□□□□□ -1.76
NIF3L1-206	ENST00000416651	NOTCH2NL	Q7Z3S9	236 aa		4.05	□□□□□ -1.76
NIF3L1-206	ENST00000416651	GPR98	Q8WXG9	6306 aa		4.04	□□□□□ -1.76
NIF3L1-206	ENST00000416651	C6orf99	Q4VX62	202 aa		4.04	□□□□□ -1.76
NIF3L1-206	ENST00000416651	CLEC2B	Q92478	149 aa		4.04	□□□□□ -1.76
NIF3L1-206	ENST00000416651	ADAMTSL4-AS1	Q5T5F5	129 aa		4.03	□□□□□ -1.76
NIF3L1-206	ENST00000416651	DHRS4-AS1	Q9P1J3	65 aa		4.03	□□□□□ -1.76
NIF3L1-206	ENST00000416651		H0YGX0	51 aa		4.02	□□□□□ -1.77
NIF3L1-206	ENST00000416651	NDUFC2	O95298	119 aa		4.02	□□□□□ -1.77
NIF3L1-206	ENST00000416651	MT1B	P07438	61 aa		4.02	□□□□□ -1.77
NIF3L1-206	ENST00000416651	BAALC-AS2	P0C853	105 aa		4.02	□□□□□ -1.77
NIF3L1-206	ENST00000416651	SPRR2E	P22531	72 aa		4.02	□□□□□ -1.77
NIF3L1-206	ENST00000416651	SPRR2B	P35325	72 aa		4.02	□□□□□ -1.77
NIF3L1-206	ENST00000416651	SPRR2A	P35326	72 aa		4.02	□□□□□ -1.77
NIF3L1-206	ENST00000416651	KRTAP10-12	P60413	245 aa		4.02	□□□□□ -1.77
NIF3L1-206	ENST00000416651		A0A1B0GX51	115 aa		4.01	□□□□□ -1.77
NIF3L1-206	ENST00000416651	COX7C	P15954	63 aa		4.01	□□□□□ -1.77
NIF3L1-206	ENST00000416651	COX7B	P24311	80 aa		4.01	□□□□□ -1.77
NIF3L1-206	ENST00000416651	DSCR10	P59022	87 aa		4.01	□□□□□ -1.77
NIF3L1-206	ENST00000416651	ELOF1	P60002	83 aa	Known RBP	4.01	□□□□□ -1.77
NIF3L1-206	ENST00000416651	LINC00308	Q8TCZ7	52 aa		4.01	□□□□□ -1.77
NIF3L1-206	ENST00000416651	RBM12B-AS1	Q9P1G2	102 aa		4.01	□□□□□ -1.77
NIF3L1-206	ENST00000416651	LITAF	Q99732	161 aa		4	□□□□□ -1.77
NIF3L1-206	ENST00000416651	IGLV5-48	A0A075B6I7	105 aa		3.99	□□□□□ -1.77
NIF3L1-206	ENST00000416651	TMEM258	P61165	79 aa		3.99	□□□□□ -1.77
NIF3L1-206	ENST00000416651	ATP5EP2	Q5VTU8	51 aa		3.99	□□□□□ -1.77
NIF3L1-206	ENST00000416651		A8MWP4	228 aa		3.98	□□□□□ -1.77
NIF3L1-206	ENST00000416651	RPS28	P62857	69 aa	Known RBP	3.98	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms