RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 TRIAP1O43715 76 aa7.27□□□□□ -1.25
DDX56-202ENST00000415758 DNAL4O96015 105 aa7.25□□□□□ -1.25
DDX56-202ENST00000415758 WFDC13Q8IUB5 93 aa7.25□□□□□ -1.25
DDX56-202ENST00000415758 C14orf144Q96I85 54 aa7.25□□□□□ -1.25
DDX56-202ENST00000415758 TMA7Q9Y2S6 64 aaKnown RBP7.25□□□□□ -1.25
DDX56-202ENST00000415758 CEND1Q8N111 149 aa7.24□□□□□ -1.25
DDX56-202ENST00000415758 C2orf91Q6ZV80 131 aa7.23□□□□□ -1.25
DDX56-202ENST00000415758 TMEM238LA0A1B0GVL6 79 aa7.22□□□□□ -1.25
DDX56-202ENST00000415758 A6NJY4 79 aa7.22□□□□□ -1.25
DDX56-202ENST00000415758 J3KT08 172 aa7.22□□□□□ -1.25
DDX56-202ENST00000415758 UBE2V1Q13404 147 aa7.22□□□□□ -1.25
DDX56-202ENST00000415758 FXYD2P54710 66 aa7.18□□□□□ -1.26
DDX56-202ENST00000415758 VPS25Q9BRG1 176 aa7.17□□□□□ -1.26
DDX56-202ENST00000415758 RBM3P98179 157 aaKnown RBP7.16□□□□□ -1.26
DDX56-202ENST00000415758 C21orf62-AS1Q17RA5 79 aa7.16□□□□□ -1.26
DDX56-202ENST00000415758 SPATA45Q537H7 98 aa7.16□□□□□ -1.26
DDX56-202ENST00000415758 PAM16Q9Y3D7 125 aa7.16□□□□□ -1.26
DDX56-202ENST00000415758 MUC12Q9UKN1 5478 aa7.16□□□□□ -1.26
DDX56-202ENST00000415758 NDUFB1O75438 58 aa7.15□□□□□ -1.26
DDX56-202ENST00000415758 H1FX-AS1Q4G0G2 97 aa7.15□□□□□ -1.26
DDX56-202ENST00000415758 COX6CP09669 75 aa7.14□□□□□ -1.27
DDX56-202ENST00000415758 DSCR8Q96T75 97 aa7.14□□□□□ -1.27
DDX56-202ENST00000415758 VAMP8Q9BV40 100 aa7.14□□□□□ -1.27
DDX56-202ENST00000415758 PSMB2P49721 201 aa7.13□□□□□ -1.27
DDX56-202ENST00000415758 LYRM7Q5U5X0 104 aa7.13□□□□□ -1.27
DDX56-202ENST00000415758 Q6ZQT0 140 aa7.13□□□□□ -1.27
DDX56-202ENST00000415758 C8orf17Q9NRJ1 99 aa7.12□□□□□ -1.27
DDX56-202ENST00000415758 IGKV3D-7A0A0C4DH55 119 aa7.1□□□□□ -1.27
DDX56-202ENST00000415758 C9JAW5 83 aa7.08□□□□□ -1.28
DDX56-202ENST00000415758 K7ERJ3 54 aa7.07□□□□□ -1.28
DDX56-202ENST00000415758 KRTAP20-1Q3LI63 56 aa7.07□□□□□ -1.28
DDX56-202ENST00000415758 PYY3Q5JQD4 70 aa7.07□□□□□ -1.28
DDX56-202ENST00000415758 Q6ZVQ6 151 aa7.07□□□□□ -1.28
DDX56-202ENST00000415758 A6NN06 94 aa7.06□□□□□ -1.28
DDX56-202ENST00000415758 A0A1B0GW54 56 aa7.03□□□□□ -1.28
DDX56-202ENST00000415758 HSD52Q0P140 79 aa7.03□□□□□ -1.28
DDX56-202ENST00000415758 MT1BP07438 61 aa7.01□□□□□ -1.29
DDX56-202ENST00000415758 BAALC-AS2P0C853 105 aa7.01□□□□□ -1.29
DDX56-202ENST00000415758 PRR15Q8IV56 129 aa7.01□□□□□ -1.29
DDX56-202ENST00000415758 MRPL34Q9BQ48 92 aaKnown RBP7□□□□□ -1.29
DDX56-202ENST00000415758 KRTAP5-9P26371 169 aa6.99□□□□□ -1.29
DDX56-202ENST00000415758 TMEM254Q8TBM7 123 aa6.99□□□□□ -1.29
DDX56-202ENST00000415758 SMIM6P0DI80 62 aa6.98□□□□□ -1.29
DDX56-202ENST00000415758 SCGB1C2P0DMR2 95 aa6.97□□□□□ -1.29
DDX56-202ENST00000415758 UQCR10Q9UDW1 63 aa6.97□□□□□ -1.29
DDX56-202ENST00000415758 MMP24-AS1A0A0U1RRL7 71 aa6.96□□□□□ -1.3
DDX56-202ENST00000415758 Q5VV11 94 aa6.96□□□□□ -1.3
DDX56-202ENST00000415758 LOC110117498A0A087WWA1 95 aa6.95□□□□□ -1.3
DDX56-202ENST00000415758 LOC105371267A0A1B0GV96 52 aa6.95□□□□□ -1.3
DDX56-202ENST00000415758 KRTAP19-8Q3LI54 63 aa6.95□□□□□ -1.3
DDX56-202ENST00000415758 JMJD7-PLA2G4BH0Y9G9 81 aa6.94□□□□□ -1.3
DDX56-202ENST00000415758 KRTAP10-5P60370 271 aa6.94□□□□□ -1.3
DDX56-202ENST00000415758 SPRR2GQ9BYE4 73 aa6.93□□□□□ -1.3
DDX56-202ENST00000415758 PDE6GP18545 87 aa6.92□□□□□ -1.3
DDX56-202ENST00000415758 C7orf65Q6ZTY9 151 aa6.92□□□□□ -1.3
DDX56-202ENST00000415758 KMT2DO14686 5537 aa6.91□□□□□ -1.3
DDX56-202ENST00000415758 IGKV2D-30A0A075B6S6 120 aa6.91□□□□□ -1.3
DDX56-202ENST00000415758 hDV103S1A0JD37 113 aa6.91□□□□□ -1.3
DDX56-202ENST00000415758 IGKV2-30P06310 120 aa6.91□□□□□ -1.3
DDX56-202ENST00000415758 MDN1Q9NU22 5596 aa6.9□□□□□ -1.31
DDX56-202ENST00000415758 FAM236AA0A1B0GUQ0 79 aa6.89□□□□□ -1.31
DDX56-202ENST00000415758 FAM236BA0A1B0GV22 79 aa6.89□□□□□ -1.31
DDX56-202ENST00000415758 NDUFS5O43920 106 aa6.89□□□□□ -1.31
DDX56-202ENST00000415758 NREPQ16612 68 aa6.89□□□□□ -1.31
DDX56-202ENST00000415758 Q5W150 140 aa6.89□□□□□ -1.31
DDX56-202ENST00000415758 TSTD3H0UI37 97 aa6.88□□□□□ -1.31
DDX56-202ENST00000415758 C5orf47Q569G3 176 aa6.87□□□□□ -1.31
DDX56-202ENST00000415758 C4orf26Q17RF5 130 aa6.86□□□□□ -1.31
DDX56-202ENST00000415758 K7EQZ3 153 aa6.85□□□□□ -1.31
DDX56-202ENST00000415758 M0R143 59 aa6.84□□□□□ -1.31
DDX56-202ENST00000415758 C14orf132Q9NPU4 83 aa6.84□□□□□ -1.31
DDX56-202ENST00000415758 ATXN8Q156A1 80 aa6.83□□□□□ -1.32
DDX56-202ENST00000415758 KRTAP2-3P0C7H8 128 aa6.82□□□□□ -1.32
DDX56-202ENST00000415758 KRTAP2-4Q9BYR9 128 aa6.82□□□□□ -1.32
DDX56-202ENST00000415758 CSAG1Q6PB30 78 aa6.8□□□□□ -1.32
DDX56-202ENST00000415758 KRTAP3-1Q9BYR8 98 aa6.8□□□□□ -1.32
DDX56-202ENST00000415758 S4R3F8 94 aa6.77□□□□□ -1.33
DDX56-202ENST00000415758 KLKP1Q107X0 134 aa6.76□□□□□ -1.33
DDX56-202ENST00000415758 LCA10Q71F78 164 aa6.74□□□□□ -1.33
DDX56-202ENST00000415758 HCG22E2RYF7 251 aa6.73□□□□□ -1.33
DDX56-202ENST00000415758 BATFQ16520 125 aa6.73□□□□□ -1.33
DDX56-202ENST00000415758 BPY2O14599 106 aa6.72□□□□□ -1.33
DDX56-202ENST00000415758 CXCL6P80162 114 aa6.72□□□□□ -1.33
DDX56-202ENST00000415758 CASC2Q6XLA1 102 aa6.72□□□□□ -1.33
DDX56-202ENST00000415758 NAA38Q9BRA0 125 aaKnown RBP6.71□□□□□ -1.34
DDX56-202ENST00000415758 SMCPP49901 116 aaPredicted RBP6.69□□□□□ -1.34
DDX56-202ENST00000415758 C1orf64Q8NEQ6 169 aa6.69□□□□□ -1.34
DDX56-202ENST00000415758 IMUPQ9GZP8 106 aa6.68□□□□□ -1.34
DDX56-202ENST00000415758 Q8N9L7 120 aa6.66□□□□□ -1.34
DDX56-202ENST00000415758 CRIPTQ9P021 101 aa6.66□□□□□ -1.34
DDX56-202ENST00000415758 SPRR2FQ96RM1 72 aa6.63□□□□□ -1.35
DDX56-202ENST00000415758 KRTAP3-3Q9BYR6 98 aa6.63□□□□□ -1.35
DDX56-202ENST00000415758 SPRR2EP22531 72 aa6.62□□□□□ -1.35
DDX56-202ENST00000415758 SPRR2BP35325 72 aa6.62□□□□□ -1.35
DDX56-202ENST00000415758 SPRR2AP35326 72 aa6.62□□□□□ -1.35
DDX56-202ENST00000415758 C9orf118A6NHY6 69 aa6.6□□□□□ -1.35
DDX56-202ENST00000415758 PCP4L1A6NKN8 68 aa6.59□□□□□ -1.35
DDX56-202ENST00000415758 COL5A1-AS1Q5SY13 56 aa6.58□□□□□ -1.36
DDX56-202ENST00000415758 KRTAP2-2Q9BYT5 123 aa6.58□□□□□ -1.36
DDX56-202ENST00000415758 KRTAP2-1Q9BYU5 128 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 289.3 ms