RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 LPAP08519 4548 aa1.73□□□□□ -2.13
LSM5-206ENST00000409987 BCE1O60756 84 aa1.73□□□□□ -2.13
LSM5-206ENST00000409987 FXYD6P3P58550 94 aa1.73□□□□□ -2.13
LSM5-206ENST00000409987 TDRG1Q3Y452 100 aa1.73□□□□□ -2.13
LSM5-206ENST00000409987 HIGD1BQ9P298 99 aa1.73□□□□□ -2.13
LSM5-206ENST00000409987 ZNF815PA8K554 130 aa1.72□□□□□ -2.13
LSM5-206ENST00000409987 MGPP08493 103 aa1.72□□□□□ -2.13
LSM5-206ENST00000409987 PSMG4Q5JS54 123 aa1.72□□□□□ -2.13
LSM5-206ENST00000409987 Q5VSD8 79 aa1.72□□□□□ -2.13
LSM5-206ENST00000409987 A0A1B0GWA3 101 aa1.71□□□□□ -2.14
LSM5-206ENST00000409987 IFI6P09912 130 aa1.71□□□□□ -2.14
LSM5-206ENST00000409987 GCHFRP30047 84 aa1.71□□□□□ -2.14
LSM5-206ENST00000409987 M0R3E3 92 aa1.7□□□□□ -2.14
LSM5-206ENST00000409987 ARL14EPLP0DKL9 152 aa1.7□□□□□ -2.14
LSM5-206ENST00000409987 SMIM11AP58511 58 aa1.7□□□□□ -2.14
LSM5-206ENST00000409987 LELP1Q5T871 98 aa1.7□□□□□ -2.14
LSM5-206ENST00000409987 HMCN1Q96RW7 5635 aa1.7□□□□□ -2.14
LSM5-206ENST00000409987 H3BQF6 201 aa1.69□□□□□ -2.14
LSM5-206ENST00000409987 M0R1W7 72 aa1.69□□□□□ -2.14
LSM5-206ENST00000409987 PRB3Q04118 309 aaPredicted RBP1.69□□□□□ -2.14
LSM5-206ENST00000409987 KRTAP21-2Q3LI59 83 aa1.69□□□□□ -2.14
LSM5-206ENST00000409987 SPRR4Q96PI1 79 aa1.69□□□□□ -2.14
LSM5-206ENST00000409987 S100A13Q99584 98 aa1.69□□□□□ -2.14
LSM5-206ENST00000409987 LINC00472Q9H8W2 130 aa1.69□□□□□ -2.14
LSM5-206ENST00000409987 KAAG1Q9UBP8 84 aa1.69□□□□□ -2.14
LSM5-206ENST00000409987 APLNQ9ULZ1 77 aa1.69□□□□□ -2.14
LSM5-206ENST00000409987 C7orf77A4D0Y5 90 aa1.68□□□□□ -2.14
LSM5-206ENST00000409987 G3V318 75 aa1.68□□□□□ -2.14
LSM5-206ENST00000409987 H3BSH0 61 aa1.68□□□□□ -2.14
LSM5-206ENST00000409987 DEFB136Q30KP8 78 aa1.68□□□□□ -2.14
LSM5-206ENST00000409987 PRR15LQ9BU68 103 aa1.68□□□□□ -2.14
LSM5-206ENST00000409987 ETDBQ3ZM63 59 aa1.67□□□□□ -2.14
LSM5-206ENST00000409987 DEFB104AQ8WTQ1 72 aa1.67□□□□□ -2.14
LSM5-206ENST00000409987 SSPOA2VEC9 5147 aa1.66□□□□□ -2.14
LSM5-206ENST00000409987 HMGN3Q15651 99 aa1.66□□□□□ -2.14
LSM5-206ENST00000409987 LINC00846Q9NV44 126 aa1.66□□□□□ -2.14
LSM5-206ENST00000409987 SYNE2Q8WXH0 6885 aaKnown RBP1.65□□□□□ -2.15
LSM5-206ENST00000409987 F8WEM9 126 aa1.65□□□□□ -2.15
LSM5-206ENST00000409987 SMR3BP02814 79 aaPredicted RBP1.65□□□□□ -2.15
LSM5-206ENST00000409987 SPINK9Q5DT21 86 aa1.65□□□□□ -2.15
LSM5-206ENST00000409987 TMEM263Q8WUH6 116 aaKnown RBP1.65□□□□□ -2.15
LSM5-206ENST00000409987 SPCS1Q9Y6A9 102 aa1.65□□□□□ -2.15
LSM5-206ENST00000409987 HMGN2P05204 90 aaKnown RBP1.64□□□□□ -2.15
LSM5-206ENST00000409987 ARMS2P0C7Q2 107 aa1.64□□□□□ -2.15
LSM5-206ENST00000409987 KRTAP10-4P60372 401 aaPredicted RBP1.64□□□□□ -2.15
LSM5-206ENST00000409987 MINOS1Q5TGZ0 78 aa1.64□□□□□ -2.15
LSM5-206ENST00000409987 PSENENQ9NZ42 101 aa1.64□□□□□ -2.15
LSM5-206ENST00000409987 IQCF6A8MYZ5 107 aa1.63□□□□□ -2.15
LSM5-206ENST00000409987 ADIRFQ15847 76 aa1.63□□□□□ -2.15
LSM5-206ENST00000409987 NMSQ5H8A3 153 aa1.63□□□□□ -2.15
LSM5-206ENST00000409987 HILPDAQ9Y5L2 63 aa1.63□□□□□ -2.15
LSM5-206ENST00000409987 MACF1Q9UPN3 7388 aaKnown RBP1.62□□□□□ -2.15
LSM5-206ENST00000409987 A0A087WVE0 104 aa1.62□□□□□ -2.15
LSM5-206ENST00000409987 Q6JHZ5 121 aa1.62□□□□□ -2.15
LSM5-206ENST00000409987 LINC01600Q96MT4 127 aa1.62□□□□□ -2.15
LSM5-206ENST00000409987 ST20Q9HBF5 79 aa1.62□□□□□ -2.15
LSM5-206ENST00000409987 USH2AO75445 5202 aa1.61□□□□□ -2.15
LSM5-206ENST00000409987 MT1HL1P0DM35 61 aa1.61□□□□□ -2.15
LSM5-206ENST00000409987 WFDC2Q14508 124 aa1.61□□□□□ -2.15
LSM5-206ENST00000409987 ALKAL2Q6UX46 152 aa1.61□□□□□ -2.15
LSM5-206ENST00000409987 GAFA1Q96PS6 74 aa1.61□□□□□ -2.15
LSM5-206ENST00000409987 KANTRA0A1W2PQU2 76 aa1.6□□□□□ -2.15
LSM5-206ENST00000409987 HAMPP81172 84 aa1.6□□□□□ -2.15
LSM5-206ENST00000409987 LINC00643Q86TS7 51 aa1.6□□□□□ -2.15
LSM5-206ENST00000409987 NEBP20929 6669 aa1.59□□□□□ -2.15
LSM5-206ENST00000409987 LEPROTL1O95214 131 aa1.59□□□□□ -2.15
LSM5-206ENST00000409987 ACYP1P07311 99 aa1.59□□□□□ -2.15
LSM5-206ENST00000409987 DEFB135Q30KP9 77 aa1.59□□□□□ -2.15
LSM5-206ENST00000409987 C10orf113Q5VZT2 155 aa1.59□□□□□ -2.15
LSM5-206ENST00000409987 FCGBPQ9Y6R7 5405 aaPredicted RBP1.59□□□□□ -2.16
LSM5-206ENST00000409987 D6R8Y8 96 aa1.58□□□□□ -2.16
LSM5-206ENST00000409987 DEFB114Q30KQ6 69 aa1.58□□□□□ -2.16
LSM5-206ENST00000409987 MUSTN1Q8IVN3 82 aa1.58□□□□□ -2.16
LSM5-206ENST00000409987 UBE2DNLQ8IWF7 75 aa1.58□□□□□ -2.16
LSM5-206ENST00000409987 MUC17Q685J3 4493 aa1.58□□□□□ -2.16
LSM5-206ENST00000409987 DEFB131BA0A096LNP1 70 aa1.57□□□□□ -2.16
LSM5-206ENST00000409987 SPATA8Q6RVD6 105 aa1.57□□□□□ -2.16
LSM5-206ENST00000409987 RPS27LQ71UM5 84 aaKnown RBP1.57□□□□□ -2.16
LSM5-206ENST00000409987 DEFB4AO15263 64 aa1.56□□□□□ -2.16
LSM5-206ENST00000409987 HEPN1Q6WQI6 88 aa1.55□□□□□ -2.16
LSM5-206ENST00000409987 PLAC8Q9NZF1 115 aa1.55□□□□□ -2.16
LSM5-206ENST00000409987 MUC12Q9UKN1 5478 aa1.55□□□□□ -2.16
LSM5-206ENST00000409987 TRBV6-1A0A0K0K1D8 114 aa1.54□□□□□ -2.16
LSM5-206ENST00000409987 MYMXA0A1B0GTQ4 84 aa1.54□□□□□ -2.16
LSM5-206ENST00000409987 H0Y9P7 68 aa1.54□□□□□ -2.16
LSM5-206ENST00000409987 DEFB107AQ8IZN7 70 aa1.54□□□□□ -2.16
LSM5-206ENST00000409987 A0A0D9SG42 100 aa1.53□□□□□ -2.16
LSM5-206ENST00000409987 S100A3P33764 101 aa1.53□□□□□ -2.16
LSM5-206ENST00000409987 RPL38P63173 70 aaKnown RBP1.52□□□□□ -2.17
LSM5-206ENST00000409987 BVES-AS1Q5T3Y7 98 aa1.52□□□□□ -2.17
LSM5-206ENST00000409987 SSBP3-AS1Q7Z2R9 100 aa1.52□□□□□ -2.17
LSM5-206ENST00000409987 GPR98Q8WXG9 6306 aa1.52□□□□□ -2.17
LSM5-206ENST00000409987 H3BUA1 57 aa1.51□□□□□ -2.17
LSM5-206ENST00000409987 SPINK7P58062 85 aa1.51□□□□□ -2.17
LSM5-206ENST00000409987 GNGT1P63211 74 aa1.51□□□□□ -2.17
LSM5-206ENST00000409987 PLGLAQ15195 96 aa1.51□□□□□ -2.17
LSM5-206ENST00000409987 USMG5Q96IX5 58 aa1.51□□□□□ -2.17
LSM5-206ENST00000409987 C10orf95Q9H7T3 257 aa1.51□□□□□ -2.17
LSM5-206ENST00000409987 UBE2D4Q9Y2X8 147 aa1.51□□□□□ -2.17
LSM5-206ENST00000409987 KMT2DO14686 5537 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms