RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 KRTAP19-2Q3LHN2 52 aa10.11□□□□□ -0.79
RTN4-207ENST00000402434 MTURNQ8N3F0 131 aa10.11□□□□□ -0.79
RTN4-207ENST00000402434 J3KT08 172 aa10.1□□□□□ -0.79
RTN4-207ENST00000402434 KRTAP16-1A8MUX0 517 aa10.1□□□□□ -0.79
RTN4-207ENST00000402434 NOTCH2NLQ7Z3S9 236 aa10.1□□□□□ -0.79
RTN4-207ENST00000402434 LCE2CQ5TA81 110 aa10.09□□□□□ -0.79
RTN4-207ENST00000402434 IGHV6-1A0A0B4J1U7 121 aa10.08□□□□□ -0.8
RTN4-207ENST00000402434 A0A1B0GVX0 72 aa10.07□□□□□ -0.8
RTN4-207ENST00000402434 C8orf87E5RJ46 101 aa10.04□□□□□ -0.8
RTN4-207ENST00000402434 SMCPP49901 116 aaPredicted RBP10.02□□□□□ -0.81
RTN4-207ENST00000402434 K7EP34 96 aa10□□□□□ -0.81
RTN4-207ENST00000402434 NREPQ16612 68 aa10□□□□□ -0.81
RTN4-207ENST00000402434 NDUFB1O75438 58 aa9.99□□□□□ -0.81
RTN4-207ENST00000402434 PRO0461Q9UI25 63 aa9.99□□□□□ -0.81
RTN4-207ENST00000402434 A8MWP4 228 aa9.98□□□□□ -0.81
RTN4-207ENST00000402434 IGKV3D-7A0A0C4DH55 119 aa9.94□□□□□ -0.82
RTN4-207ENST00000402434 MT1HP80294 61 aa9.93□□□□□ -0.82
RTN4-207ENST00000402434 GTF2H5Q6ZYL4 71 aa9.91□□□□□ -0.82
RTN4-207ENST00000402434 PRR15Q8IV56 129 aa9.91□□□□□ -0.82
RTN4-207ENST00000402434 C8orf17Q9NRJ1 99 aa9.91□□□□□ -0.82
RTN4-207ENST00000402434 COX6B2Q6YFQ2 88 aa9.89□□□□□ -0.83
RTN4-207ENST00000402434 Q8N9P0 234 aaPredicted RBP9.89□□□□□ -0.83
RTN4-207ENST00000402434 F8W1H4 67 aa9.85□□□□□ -0.83
RTN4-207ENST00000402434 Q6ZVQ6 151 aa9.84□□□□□ -0.83
RTN4-207ENST00000402434 BPY2O14599 106 aa9.83□□□□□ -0.84
RTN4-207ENST00000402434 A0A1B0GV90 55 aa9.82□□□□□ -0.84
RTN4-207ENST00000402434 K7EQZ3 153 aa9.82□□□□□ -0.84
RTN4-207ENST00000402434 ZCCHC13Q8WW36 166 aaKnown RBP9.82□□□□□ -0.84
RTN4-207ENST00000402434 MMP24-AS1A0A0U1RRL7 71 aa9.81□□□□□ -0.84
RTN4-207ENST00000402434 LINC00846Q9NV44 126 aa9.79□□□□□ -0.84
RTN4-207ENST00000402434 FLGP20930 4061 aaPredicted RBP9.78□□□□□ -0.84
RTN4-207ENST00000402434 TMEM254Q8TBM7 123 aa9.78□□□□□ -0.84
RTN4-207ENST00000402434 ETDBQ3ZM63 59 aa9.76□□□□□ -0.85
RTN4-207ENST00000402434 MRPL34Q9BQ48 92 aaKnown RBP9.76□□□□□ -0.85
RTN4-207ENST00000402434 MPLKIPQ8TAP9 179 aa9.75□□□□□ -0.85
RTN4-207ENST00000402434 hDV103S1A0JD37 113 aa9.74□□□□□ -0.85
RTN4-207ENST00000402434 HRES1P13985 223 aa9.74□□□□□ -0.85
RTN4-207ENST00000402434 KRTAP9-2Q9BYQ4 174 aa9.74□□□□□ -0.85
RTN4-207ENST00000402434 UBL5Q9BZL1 73 aa9.74□□□□□ -0.85
RTN4-207ENST00000402434 M0R2T5 61 aa9.72□□□□□ -0.85
RTN4-207ENST00000402434 LORP23490 312 aaPredicted RBP9.71□□□□□ -0.86
RTN4-207ENST00000402434 Q8N9L7 120 aa9.71□□□□□ -0.86
RTN4-207ENST00000402434 SPINK7P58062 85 aa9.7□□□□□ -0.86
RTN4-207ENST00000402434 KRTAP10-6P60371 365 aaPredicted RBP9.7□□□□□ -0.86
RTN4-207ENST00000402434 RBM12B-AS1Q9P1G2 102 aa9.67□□□□□ -0.86
RTN4-207ENST00000402434 CASC2Q6XLA1 102 aa9.64□□□□□ -0.87
RTN4-207ENST00000402434 NDUFS5O43920 106 aa9.63□□□□□ -0.87
RTN4-207ENST00000402434 WFDC13Q8IUB5 93 aa9.63□□□□□ -0.87
RTN4-207ENST00000402434 FAM236DA0A1B0GTK5 79 aa9.62□□□□□ -0.87
RTN4-207ENST00000402434 FAM236CP0DP71 79 aa9.62□□□□□ -0.87
RTN4-207ENST00000402434 LCE2DQ5TA82 110 aaPredicted RBP9.6□□□□□ -0.87
RTN4-207ENST00000402434 CXCL6P80162 114 aa9.58□□□□□ -0.88
RTN4-207ENST00000402434 HCG22E2RYF7 251 aa9.56□□□□□ -0.88
RTN4-207ENST00000402434 Q5W150 140 aa9.55□□□□□ -0.88
RTN4-207ENST00000402434 ACYP1P07311 99 aa9.54□□□□□ -0.88
RTN4-207ENST00000402434 FAM240AA0A1B0GVK7 77 aa9.52□□□□□ -0.89
RTN4-207ENST00000402434 KRTAP9-8Q9BYQ0 159 aa9.46□□□□□ -0.9
RTN4-207ENST00000402434 IGKV2D-30A0A075B6S6 120 aa9.45□□□□□ -0.9
RTN4-207ENST00000402434 IGKV2-30P06310 120 aa9.45□□□□□ -0.9
RTN4-207ENST00000402434 C7orf65Q6ZTY9 151 aa9.45□□□□□ -0.9
RTN4-207ENST00000402434 ATP5EP2Q5VTU8 51 aa9.4□□□□□ -0.9
RTN4-207ENST00000402434 TP53AIP1Q9HCN2 124 aa9.4□□□□□ -0.9
RTN4-207ENST00000402434 H1FX-AS1Q4G0G2 97 aa9.33□□□□□ -0.92
RTN4-207ENST00000402434 KRTAP9-6A0A140TA67 174 aa9.32□□□□□ -0.92
RTN4-207ENST00000402434 MT2AP02795 61 aa9.31□□□□□ -0.92
RTN4-207ENST00000402434 LINC00643Q86TS7 51 aa9.31□□□□□ -0.92
RTN4-207ENST00000402434 HIST1H4AP62805 103 aaKnown RBP9.28□□□□□ -0.92
RTN4-207ENST00000402434 C4orf26Q17RF5 130 aa9.28□□□□□ -0.92
RTN4-207ENST00000402434 FSIP2Q5CZC0 6907 aa9.28□□□□□ -0.92
RTN4-207ENST00000402434 MT1FP04733 61 aa9.24□□□□□ -0.93
RTN4-207ENST00000402434 CRCT1Q9UGL9 99 aa9.24□□□□□ -0.93
RTN4-207ENST00000402434 TRAV22A0A0B4J277 110 aa9.21□□□□□ -0.94
RTN4-207ENST00000402434 J3QR89 54 aa9.21□□□□□ -0.94
RTN4-207ENST00000402434 KRTAP10-10P60014 251 aa9.2□□□□□ -0.94
RTN4-207ENST00000402434 A0A087WVE0 104 aa9.19□□□□□ -0.94
RTN4-207ENST00000402434 KRTAP3-1Q9BYR8 98 aa9.18□□□□□ -0.94
RTN4-207ENST00000402434 CYP4F30PQ9H0H9 118 aa9.17□□□□□ -0.94
RTN4-207ENST00000402434 UQCRQO14949 82 aa9.16□□□□□ -0.94
RTN4-207ENST00000402434 K7ERU9 68 aa9.15□□□□□ -0.95
RTN4-207ENST00000402434 C1orf64Q8NEQ6 169 aa9.15□□□□□ -0.95
RTN4-207ENST00000402434 KRTAP9-3Q9BYQ3 159 aa9.15□□□□□ -0.95
RTN4-207ENST00000402434 LOC101927531A0A1B0GV80 90 aa9.14□□□□□ -0.95
RTN4-207ENST00000402434 ATOX1O00244 68 aa9.08□□□□□ -0.96
RTN4-207ENST00000402434 H0Y9P7 68 aa9.08□□□□□ -0.96
RTN4-207ENST00000402434 LCE2BO14633 110 aa9.04□□□□□ -0.96
RTN4-207ENST00000402434 OCR1Q9BZK8 76 aa9.04□□□□□ -0.96
RTN4-207ENST00000402434 USH2AO75445 5202 aa9.04□□□□□ -0.96
RTN4-207ENST00000402434 S4R3F8 94 aa9.03□□□□□ -0.96
RTN4-207ENST00000402434 C5orf47Q569G3 176 aa9□□□□□ -0.97
RTN4-207ENST00000402434 LCA10Q71F78 164 aa8.99□□□□□ -0.97
RTN4-207ENST00000402434 CSAG1Q6PB30 78 aa8.96□□□□□ -0.97
RTN4-207ENST00000402434 LINC00208Q96KT6 92 aa8.96□□□□□ -0.98
RTN4-207ENST00000402434 MP68P56378 58 aa8.94□□□□□ -0.98
RTN4-207ENST00000402434 MT-ATP8P03928 68 aa8.93□□□□□ -0.98
RTN4-207ENST00000402434 IMUPQ9GZP8 106 aa8.93□□□□□ -0.98
RTN4-207ENST00000402434 KRTAP3-3Q9BYR6 98 aa8.91□□□□□ -0.98
RTN4-207ENST00000402434 SCGB1A1P11684 91 aa8.89□□□□□ -0.99
RTN4-207ENST00000402434 KLKP1Q107X0 134 aa8.89□□□□□ -0.99
RTN4-207ENST00000402434 SSPOA2VEC9 5147 aa8.88□□□□□ -0.99
RTN4-207ENST00000402434 H3BPC8 53 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms