RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 LOC110117498A0A087WWA1 95 aa7.22□□□□□ -1.25
SEC13-204ENST00000397099 IGHV6-1A0A0B4J1U7 121 aa7.22□□□□□ -1.25
SEC13-204ENST00000397099 A0A1B0GVX0 72 aa7.22□□□□□ -1.25
SEC13-204ENST00000397099 KRTAP10-6P60371 365 aaPredicted RBP7.22□□□□□ -1.25
SEC13-204ENST00000397099 Q6ZQT0 140 aa7.22□□□□□ -1.25
SEC13-204ENST00000397099 KRTAP16-1A8MUX0 517 aa7.21□□□□□ -1.26
SEC13-204ENST00000397099 DEFB116Q30KQ4 102 aa7.21□□□□□ -1.26
SEC13-204ENST00000397099 NDUFB1O75438 58 aa7.2□□□□□ -1.26
SEC13-204ENST00000397099 LORP23490 312 aaPredicted RBP7.2□□□□□ -1.26
SEC13-204ENST00000397099 FSIP2Q5CZC0 6907 aa7.2□□□□□ -1.26
SEC13-204ENST00000397099 NAA38Q9BRA0 125 aaKnown RBP7.18□□□□□ -1.26
SEC13-204ENST00000397099 BATFQ16520 125 aa7.16□□□□□ -1.26
SEC13-204ENST00000397099 NOTCH2NLQ7Z3S9 236 aa7.15□□□□□ -1.26
SEC13-204ENST00000397099 C9orf118A6NHY6 69 aa7.13□□□□□ -1.27
SEC13-204ENST00000397099 H3BT86 120 aa7.13□□□□□ -1.27
SEC13-204ENST00000397099 A8MWP4 228 aa7.12□□□□□ -1.27
SEC13-204ENST00000397099 C14orf132Q9NPU4 83 aa7.12□□□□□ -1.27
SEC13-204ENST00000397099 RBM12B-AS1Q9P1G2 102 aa7.12□□□□□ -1.27
SEC13-204ENST00000397099 A0A1W2PPM0 123 aa7.1□□□□□ -1.27
SEC13-204ENST00000397099 NREPQ16612 68 aa7.1□□□□□ -1.27
SEC13-204ENST00000397099 FAM236DA0A1B0GTK5 79 aa7.08□□□□□ -1.28
SEC13-204ENST00000397099 FAM236CP0DP71 79 aa7.08□□□□□ -1.28
SEC13-204ENST00000397099 MTURNQ8N3F0 131 aa7.08□□□□□ -1.28
SEC13-204ENST00000397099 Q8N9P0 234 aaPredicted RBP7.08□□□□□ -1.28
SEC13-204ENST00000397099 ZCCHC13Q8WW36 166 aaKnown RBP7.08□□□□□ -1.28
SEC13-204ENST00000397099 TAX1BP3O14907 124 aa7.07□□□□□ -1.28
SEC13-204ENST00000397099 C8orf17Q9NRJ1 99 aa7.06□□□□□ -1.28
SEC13-204ENST00000397099 MPLKIPQ8TAP9 179 aa7.05□□□□□ -1.28
SEC13-204ENST00000397099 IGKV3D-7A0A0C4DH55 119 aa7.04□□□□□ -1.28
SEC13-204ENST00000397099 PRR15Q8IV56 129 aa7.04□□□□□ -1.28
SEC13-204ENST00000397099 HRES1P13985 223 aa7.03□□□□□ -1.28
SEC13-204ENST00000397099 Q6ZVQ6 151 aa7.03□□□□□ -1.28
SEC13-204ENST00000397099 SPINK7P58062 85 aa7□□□□□ -1.29
SEC13-204ENST00000397099 TMEM254Q8TBM7 123 aa6.99□□□□□ -1.29
SEC13-204ENST00000397099 SPCS1Q9Y6A9 102 aa6.99□□□□□ -1.29
SEC13-204ENST00000397099 COL5A1-AS1Q5SY13 56 aa6.98□□□□□ -1.29
SEC13-204ENST00000397099 MRPL34Q9BQ48 92 aaKnown RBP6.98□□□□□ -1.29
SEC13-204ENST00000397099 BPY2O14599 106 aa6.97□□□□□ -1.29
SEC13-204ENST00000397099 MMP24-AS1A0A0U1RRL7 71 aa6.95□□□□□ -1.3
SEC13-204ENST00000397099 hDV103S1A0JD37 113 aa6.95□□□□□ -1.3
SEC13-204ENST00000397099 K7EQZ3 153 aa6.93□□□□□ -1.3
SEC13-204ENST00000397099 KRTAP9-8Q9BYQ0 159 aa6.92□□□□□ -1.3
SEC13-204ENST00000397099 WFDC13Q8IUB5 93 aa6.9□□□□□ -1.3
SEC13-204ENST00000397099 NDUFS5O43920 106 aa6.89□□□□□ -1.31
SEC13-204ENST00000397099 UBL5Q9BZL1 73 aa6.89□□□□□ -1.31
SEC13-204ENST00000397099 K7EP34 96 aa6.88□□□□□ -1.31
SEC13-204ENST00000397099 SMCPP49901 116 aaPredicted RBP6.88□□□□□ -1.31
SEC13-204ENST00000397099 GTF2H5Q6ZYL4 71 aa6.87□□□□□ -1.31
SEC13-204ENST00000397099 PRO0461Q9UI25 63 aa6.86□□□□□ -1.31
SEC13-204ENST00000397099 CASC2Q6XLA1 102 aa6.85□□□□□ -1.31
SEC13-204ENST00000397099 F8W1H4 67 aa6.82□□□□□ -1.32
SEC13-204ENST00000397099 MT2AP02795 61 aa6.82□□□□□ -1.32
SEC13-204ENST00000397099 CXCL6P80162 114 aa6.82□□□□□ -1.32
SEC13-204ENST00000397099 C7orf65Q6ZTY9 151 aa6.82□□□□□ -1.32
SEC13-204ENST00000397099 LINC00846Q9NV44 126 aa6.81□□□□□ -1.32
SEC13-204ENST00000397099 PCP4L1A6NKN8 68 aa6.79□□□□□ -1.32
SEC13-204ENST00000397099 KRTAP10-10P60014 251 aa6.79□□□□□ -1.32
SEC13-204ENST00000397099 Q8N9L7 120 aa6.79□□□□□ -1.32
SEC13-204ENST00000397099 HCG22E2RYF7 251 aa6.78□□□□□ -1.32
SEC13-204ENST00000397099 H1FX-AS1Q4G0G2 97 aa6.78□□□□□ -1.32
SEC13-204ENST00000397099 IGKV2D-30A0A075B6S6 120 aa6.77□□□□□ -1.33
SEC13-204ENST00000397099 MT1FP04733 61 aa6.77□□□□□ -1.33
SEC13-204ENST00000397099 IGKV2-30P06310 120 aa6.77□□□□□ -1.33
SEC13-204ENST00000397099 Q5W150 140 aa6.75□□□□□ -1.33
SEC13-204ENST00000397099 USH2AO75445 5202 aa6.74□□□□□ -1.33
SEC13-204ENST00000397099 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.72□□□□□ -1.33
SEC13-204ENST00000397099 ETDBQ3ZM63 59 aa6.72□□□□□ -1.33
SEC13-204ENST00000397099 TP53AIP1Q9HCN2 124 aa6.72□□□□□ -1.33
SEC13-204ENST00000397099 LCE2BO14633 110 aa6.7□□□□□ -1.34
SEC13-204ENST00000397099 KRTAP9-3Q9BYQ3 159 aa6.7□□□□□ -1.34
SEC13-204ENST00000397099 KRTAP9-7A8MTY7 169 aa6.69□□□□□ -1.34
SEC13-204ENST00000397099 ACYP1P07311 99 aa6.68□□□□□ -1.34
SEC13-204ENST00000397099 KRTAP19-1Q8IUB9 90 aa6.66□□□□□ -1.34
SEC13-204ENST00000397099 SSPOA2VEC9 5147 aa6.66□□□□□ -1.34
SEC13-204ENST00000397099 C4orf26Q17RF5 130 aa6.64□□□□□ -1.35
SEC13-204ENST00000397099 FAM240AA0A1B0GVK7 77 aa6.62□□□□□ -1.35
SEC13-204ENST00000397099 ATP5EP2Q5VTU8 51 aa6.6□□□□□ -1.35
SEC13-204ENST00000397099 FCGBPQ9Y6R7 5405 aaPredicted RBP6.56□□□□□ -1.36
SEC13-204ENST00000397099 C1orf64Q8NEQ6 169 aa6.55□□□□□ -1.36
SEC13-204ENST00000397099 S4R3F8 94 aa6.54□□□□□ -1.36
SEC13-204ENST00000397099 TRAV22A0A0B4J277 110 aa6.53□□□□□ -1.36
SEC13-204ENST00000397099 LOC101927531A0A1B0GV80 90 aa6.52□□□□□ -1.37
SEC13-204ENST00000397099 CSAG1Q6PB30 78 aa6.52□□□□□ -1.37
SEC13-204ENST00000397099 KRTAP3-1Q9BYR8 98 aa6.5□□□□□ -1.37
SEC13-204ENST00000397099 CYP4F30PQ9H0H9 118 aa6.5□□□□□ -1.37
SEC13-204ENST00000397099 ATOX1O00244 68 aa6.49□□□□□ -1.37
SEC13-204ENST00000397099 HIST1H4AP62805 103 aaKnown RBP6.49□□□□□ -1.37
SEC13-204ENST00000397099 UQCRQO14949 82 aa6.48□□□□□ -1.37
SEC13-204ENST00000397099 C5orf47Q569G3 176 aa6.48□□□□□ -1.37
SEC13-204ENST00000397099 MACF1Q9UPN3 7388 aaKnown RBP6.47□□□□□ -1.37
SEC13-204ENST00000397099 KRTAP19-6Q3LI70 58 aa6.47□□□□□ -1.37
SEC13-204ENST00000397099 LINC00643Q86TS7 51 aa6.47□□□□□ -1.37
SEC13-204ENST00000397099 A0A1B0GV90 55 aa6.46□□□□□ -1.38
SEC13-204ENST00000397099 LCA10Q71F78 164 aa6.45□□□□□ -1.38
SEC13-204ENST00000397099 FAM236AA0A1B0GUQ0 79 aa6.44□□□□□ -1.38
SEC13-204ENST00000397099 FAM236BA0A1B0GV22 79 aa6.44□□□□□ -1.38
SEC13-204ENST00000397099 H0Y9P7 68 aa6.4□□□□□ -1.38
SEC13-204ENST00000397099 J3QR89 54 aa6.39□□□□□ -1.39
SEC13-204ENST00000397099 A8MUN3 132 aa6.36□□□□□ -1.39
SEC13-204ENST00000397099 SYNE2Q8WXH0 6885 aaKnown RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms