RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 NDUFB1O75438 58 aa6.13□□□□□ -1.43
HSPG2-202ENST00000374676 DSCR10P59022 87 aa6.13□□□□□ -1.43
HSPG2-202ENST00000374676 IGHV6-1A0A0B4J1U7 121 aa6.12□□□□□ -1.43
HSPG2-202ENST00000374676 RPL37P61927 97 aaKnown RBP6.12□□□□□ -1.43
HSPG2-202ENST00000374676 A8MWP4 228 aa6.11□□□□□ -1.43
HSPG2-202ENST00000374676 C8orf87E5RJ46 101 aa6.11□□□□□ -1.43
HSPG2-202ENST00000374676 Q6ZVQ6 151 aa6.11□□□□□ -1.43
HSPG2-202ENST00000374676 Q75L30 129 aa6.11□□□□□ -1.43
HSPG2-202ENST00000374676 LINC00846Q9NV44 126 aa6.11□□□□□ -1.43
HSPG2-202ENST00000374676 MUC2Q02817 5179 aa6.1□□□□□ -1.43
HSPG2-202ENST00000374676 NOTCH2NLQ7Z3S9 236 aa6.1□□□□□ -1.43
HSPG2-202ENST00000374676 IGKV3D-7A0A0C4DH55 119 aa6.09□□□□□ -1.43
HSPG2-202ENST00000374676 A8MUU9 505 aa6.09□□□□□ -1.43
HSPG2-202ENST00000374676 BPY2O14599 106 aa6.09□□□□□ -1.43
HSPG2-202ENST00000374676 C20orf166-AS1Q96NR2 134 aa6.09□□□□□ -1.43
HSPG2-202ENST00000374676 UBL5Q9BZL1 73 aa6.09□□□□□ -1.43
HSPG2-202ENST00000374676 KRTAP16-1A8MUX0 517 aa6.08□□□□□ -1.44
HSPG2-202ENST00000374676 PRR15Q8IV56 129 aa6.08□□□□□ -1.44
HSPG2-202ENST00000374676 PCOTHQ58A44 107 aa6.07□□□□□ -1.44
HSPG2-202ENST00000374676 ACYP1P07311 99 aa6.06□□□□□ -1.44
HSPG2-202ENST00000374676 C8orf17Q9NRJ1 99 aa6.06□□□□□ -1.44
HSPG2-202ENST00000374676 FAM240AA0A1B0GVK7 77 aa6.05□□□□□ -1.44
HSPG2-202ENST00000374676 ATP11AUNQ6ZP68 121 aa6.04□□□□□ -1.44
HSPG2-202ENST00000374676 K7EQZ3 153 aa6.03□□□□□ -1.44
HSPG2-202ENST00000374676 KRTAP4-1Q9BYQ7 146 aa6.03□□□□□ -1.44
HSPG2-202ENST00000374676 MMP24-AS1A0A0U1RRL7 71 aa6.01□□□□□ -1.45
HSPG2-202ENST00000374676 Q8N9P0 234 aaPredicted RBP6.01□□□□□ -1.45
HSPG2-202ENST00000374676 CXCL6P80162 114 aa5.99□□□□□ -1.45
HSPG2-202ENST00000374676 TMEM254Q8TBM7 123 aa5.99□□□□□ -1.45
HSPG2-202ENST00000374676 hDV103S1A0JD37 113 aa5.98□□□□□ -1.45
HSPG2-202ENST00000374676 Q8N9L7 120 aa5.98□□□□□ -1.45
HSPG2-202ENST00000374676 MRPL34Q9BQ48 92 aaKnown RBP5.97□□□□□ -1.45
HSPG2-202ENST00000374676 A0A0U1RQV1 116 aa5.96□□□□□ -1.46
HSPG2-202ENST00000374676 J3QR89 54 aa5.96□□□□□ -1.46
HSPG2-202ENST00000374676 FAT4Q6V0I7 4981 aa5.94□□□□□ -1.46
HSPG2-202ENST00000374676 ATP5EP2Q5VTU8 51 aa5.93□□□□□ -1.46
HSPG2-202ENST00000374676 CASC2Q6XLA1 102 aa5.93□□□□□ -1.46
HSPG2-202ENST00000374676 WFDC13Q8IUB5 93 aa5.93□□□□□ -1.46
HSPG2-202ENST00000374676 ZCCHC13Q8WW36 166 aaKnown RBP5.93□□□□□ -1.46
HSPG2-202ENST00000374676 HCG22E2RYF7 251 aa5.92□□□□□ -1.46
HSPG2-202ENST00000374676 LINC00643Q86TS7 51 aa5.92□□□□□ -1.46
HSPG2-202ENST00000374676 NDUFS5O43920 106 aa5.88□□□□□ -1.47
HSPG2-202ENST00000374676 KRTAP19-2Q3LHN2 52 aa5.87□□□□□ -1.47
HSPG2-202ENST00000374676 K7ERU9 68 aa5.85□□□□□ -1.47
HSPG2-202ENST00000374676 FLGP20930 4061 aaPredicted RBP5.84□□□□□ -1.47
HSPG2-202ENST00000374676 LCE2CQ5TA81 110 aa5.84□□□□□ -1.47
HSPG2-202ENST00000374676 HIST1H4AP62805 103 aaKnown RBP5.83□□□□□ -1.48
HSPG2-202ENST00000374676 Q5W150 140 aa5.83□□□□□ -1.48
HSPG2-202ENST00000374676 SPINK7P58062 85 aa5.82□□□□□ -1.48
HSPG2-202ENST00000374676 TP53AIP1Q9HCN2 124 aa5.82□□□□□ -1.48
HSPG2-202ENST00000374676 HRES1P13985 223 aa5.81□□□□□ -1.48
HSPG2-202ENST00000374676 LCE2AQ5TA79 106 aaPredicted RBP5.81□□□□□ -1.48
HSPG2-202ENST00000374676 MPLKIPQ8TAP9 179 aa5.8□□□□□ -1.48
HSPG2-202ENST00000374676 A0A087WVE0 104 aa5.78□□□□□ -1.48
HSPG2-202ENST00000374676 COX6B2Q6YFQ2 88 aa5.78□□□□□ -1.48
HSPG2-202ENST00000374676 RBM12B-AS1Q9P1G2 102 aa5.76□□□□□ -1.49
HSPG2-202ENST00000374676 IGKV2D-30A0A075B6S6 120 aa5.74□□□□□ -1.49
HSPG2-202ENST00000374676 IGKV2-30P06310 120 aa5.74□□□□□ -1.49
HSPG2-202ENST00000374676 C7orf65Q6ZTY9 151 aa5.74□□□□□ -1.49
HSPG2-202ENST00000374676 IMUPQ9GZP8 106 aa5.74□□□□□ -1.49
HSPG2-202ENST00000374676 MT1HP80294 61 aa5.73□□□□□ -1.49
HSPG2-202ENST00000374676 FAM236DA0A1B0GTK5 79 aa5.71□□□□□ -1.5
HSPG2-202ENST00000374676 UQCRQO14949 82 aa5.71□□□□□ -1.5
HSPG2-202ENST00000374676 MT-ATP8P03928 68 aa5.71□□□□□ -1.5
HSPG2-202ENST00000374676 FAM236CP0DP71 79 aa5.71□□□□□ -1.5
HSPG2-202ENST00000374676 TRAV22A0A0B4J277 110 aa5.69□□□□□ -1.5
HSPG2-202ENST00000374676 OCR1Q9BZK8 76 aa5.68□□□□□ -1.5
HSPG2-202ENST00000374676 LOC101927531A0A1B0GV80 90 aa5.65□□□□□ -1.5
HSPG2-202ENST00000374676 ATOX1O00244 68 aa5.65□□□□□ -1.5
HSPG2-202ENST00000374676 H0Y9P7 68 aa5.64□□□□□ -1.51
HSPG2-202ENST00000374676 M0R2T5 61 aa5.64□□□□□ -1.51
HSPG2-202ENST00000374676 SCGB1A1P11684 91 aa5.64□□□□□ -1.51
HSPG2-202ENST00000374676 CYP4F30PQ9H0H9 118 aa5.64□□□□□ -1.51
HSPG2-202ENST00000374676 C5orf47Q569G3 176 aa5.62□□□□□ -1.51
HSPG2-202ENST00000374676 C4orf26Q17RF5 130 aa5.61□□□□□ -1.51
HSPG2-202ENST00000374676 MP68P56378 58 aa5.6□□□□□ -1.51
HSPG2-202ENST00000374676 H1FX-AS1Q4G0G2 97 aa5.6□□□□□ -1.51
HSPG2-202ENST00000374676 FAM236AA0A1B0GUQ0 79 aa5.59□□□□□ -1.51
HSPG2-202ENST00000374676 FAM236BA0A1B0GV22 79 aa5.59□□□□□ -1.51
HSPG2-202ENST00000374676 KRTAP10-6P60371 365 aaPredicted RBP5.59□□□□□ -1.51
HSPG2-202ENST00000374676 C1orf64Q8NEQ6 169 aa5.59□□□□□ -1.51
HSPG2-202ENST00000374676 H3BPC8 53 aa5.58□□□□□ -1.52
HSPG2-202ENST00000374676 LORP23490 312 aaPredicted RBP5.58□□□□□ -1.52
HSPG2-202ENST00000374676 SMIM20Q8N5G0 67 aa5.58□□□□□ -1.52
HSPG2-202ENST00000374676 LINC00208Q96KT6 92 aa5.58□□□□□ -1.52
HSPG2-202ENST00000374676 KRTAP3-1Q9BYR8 98 aa5.56□□□□□ -1.52
HSPG2-202ENST00000374676 TRAV7A0A075B6U4 112 aa5.55□□□□□ -1.52
HSPG2-202ENST00000374676 KLKP1Q107X0 134 aa5.51□□□□□ -1.53
HSPG2-202ENST00000374676 KRTAP9-8Q9BYQ0 159 aa5.48□□□□□ -1.53
HSPG2-202ENST00000374676 SERP2Q8N6R1 65 aa5.46□□□□□ -1.54
HSPG2-202ENST00000374676 A8MUN3 132 aa5.45□□□□□ -1.54
HSPG2-202ENST00000374676 S4R3F8 94 aa5.45□□□□□ -1.54
HSPG2-202ENST00000374676 LCE2DQ5TA82 110 aaPredicted RBP5.43□□□□□ -1.54
HSPG2-202ENST00000374676 MT2AP02795 61 aa5.42□□□□□ -1.54
HSPG2-202ENST00000374676 LCA10Q71F78 164 aa5.41□□□□□ -1.54
HSPG2-202ENST00000374676 CSAG1Q6PB30 78 aa5.4□□□□□ -1.54
HSPG2-202ENST00000374676 KRTAP9-2Q9BYQ4 174 aa5.4□□□□□ -1.54
HSPG2-202ENST00000374676 C20orf197Q8N268 126 aa5.38□□□□□ -1.55
HSPG2-202ENST00000374676 KRTAP3-3Q9BYR6 98 aa5.38□□□□□ -1.55
HSPG2-202ENST00000374676 SNURFQ9Y675 71 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms