RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 A0A1B0GVX0 72 aa7.43□□□□□ -1.22
SSR4-202ENST00000370085 DSCR10P59022 87 aa7.43□□□□□ -1.22
SSR4-202ENST00000370085 Q75L30 129 aa7.43□□□□□ -1.22
SSR4-202ENST00000370085 ATP11AUNQ6ZP68 121 aa7.42□□□□□ -1.22
SSR4-202ENST00000370085 ETDBQ3ZM63 59 aa7.41□□□□□ -1.22
SSR4-202ENST00000370085 PCOTHQ58A44 107 aa7.41□□□□□ -1.22
SSR4-202ENST00000370085 A8MWP4 228 aa7.4□□□□□ -1.22
SSR4-202ENST00000370085 UBL5Q9BZL1 73 aa7.4□□□□□ -1.22
SSR4-202ENST00000370085 MUC17Q685J3 4493 aa7.39□□□□□ -1.23
SSR4-202ENST00000370085 C20orf166-AS1Q96NR2 134 aa7.39□□□□□ -1.23
SSR4-202ENST00000370085 BPY2O14599 106 aa7.38□□□□□ -1.23
SSR4-202ENST00000370085 A8MUU9 505 aa7.36□□□□□ -1.23
SSR4-202ENST00000370085 Q6ZVQ6 151 aa7.36□□□□□ -1.23
SSR4-202ENST00000370085 MUC2Q02817 5179 aa7.35□□□□□ -1.23
SSR4-202ENST00000370085 IGKV3D-7A0A0C4DH55 119 aa7.34□□□□□ -1.23
SSR4-202ENST00000370085 PRR15Q8IV56 129 aa7.34□□□□□ -1.23
SSR4-202ENST00000370085 A0A1B0GV90 55 aa7.33□□□□□ -1.24
SSR4-202ENST00000370085 NOTCH2NLQ7Z3S9 236 aa7.33□□□□□ -1.24
SSR4-202ENST00000370085 C8orf17Q9NRJ1 99 aa7.33□□□□□ -1.24
SSR4-202ENST00000370085 LINC00846Q9NV44 126 aa7.33□□□□□ -1.24
SSR4-202ENST00000370085 KRTAP16-1A8MUX0 517 aa7.32□□□□□ -1.24
SSR4-202ENST00000370085 ACYP1P07311 99 aa7.3□□□□□ -1.24
SSR4-202ENST00000370085 K7EQZ3 153 aa7.28□□□□□ -1.24
SSR4-202ENST00000370085 KRTAP4-1Q9BYQ7 146 aa7.27□□□□□ -1.25
SSR4-202ENST00000370085 FAM240AA0A1B0GVK7 77 aa7.26□□□□□ -1.25
SSR4-202ENST00000370085 hDV103S1A0JD37 113 aa7.25□□□□□ -1.25
SSR4-202ENST00000370085 TMEM254Q8TBM7 123 aa7.25□□□□□ -1.25
SSR4-202ENST00000370085 MMP24-AS1A0A0U1RRL7 71 aa7.24□□□□□ -1.25
SSR4-202ENST00000370085 Q8N9P0 234 aaPredicted RBP7.24□□□□□ -1.25
SSR4-202ENST00000370085 MRPL34Q9BQ48 92 aaKnown RBP7.24□□□□□ -1.25
SSR4-202ENST00000370085 CXCL6P80162 114 aa7.23□□□□□ -1.25
SSR4-202ENST00000370085 NDUFS5O43920 106 aa7.21□□□□□ -1.26
SSR4-202ENST00000370085 Q8N9L7 120 aa7.21□□□□□ -1.26
SSR4-202ENST00000370085 J3QR89 54 aa7.2□□□□□ -1.26
SSR4-202ENST00000370085 CASC2Q6XLA1 102 aa7.2□□□□□ -1.26
SSR4-202ENST00000370085 ZCCHC13Q8WW36 166 aaKnown RBP7.2□□□□□ -1.26
SSR4-202ENST00000370085 ATP5EP2Q5VTU8 51 aa7.18□□□□□ -1.26
SSR4-202ENST00000370085 WFDC13Q8IUB5 93 aa7.18□□□□□ -1.26
SSR4-202ENST00000370085 HCG22E2RYF7 251 aa7.17□□□□□ -1.26
SSR4-202ENST00000370085 COX6B2Q6YFQ2 88 aa7.17□□□□□ -1.26
SSR4-202ENST00000370085 FAT4Q6V0I7 4981 aa7.13□□□□□ -1.27
SSR4-202ENST00000370085 LINC00643Q86TS7 51 aa7.11□□□□□ -1.27
SSR4-202ENST00000370085 RBM12B-AS1Q9P1G2 102 aa7.1□□□□□ -1.27
SSR4-202ENST00000370085 SPINK7P58062 85 aa7.08□□□□□ -1.28
SSR4-202ENST00000370085 HIST1H4AP62805 103 aaKnown RBP7.08□□□□□ -1.28
SSR4-202ENST00000370085 TP53AIP1Q9HCN2 124 aa7.07□□□□□ -1.28
SSR4-202ENST00000370085 FAM236DA0A1B0GTK5 79 aa7.06□□□□□ -1.28
SSR4-202ENST00000370085 FAM236CP0DP71 79 aa7.06□□□□□ -1.28
SSR4-202ENST00000370085 KRTAP19-2Q3LHN2 52 aa7.05□□□□□ -1.28
SSR4-202ENST00000370085 LCE2AQ5TA79 106 aaPredicted RBP7.05□□□□□ -1.28
SSR4-202ENST00000370085 LCE2CQ5TA81 110 aa7.04□□□□□ -1.28
SSR4-202ENST00000370085 K7ERU9 68 aa7.02□□□□□ -1.29
SSR4-202ENST00000370085 HRES1P13985 223 aa7.01□□□□□ -1.29
SSR4-202ENST00000370085 C7orf65Q6ZTY9 151 aa7.01□□□□□ -1.29
SSR4-202ENST00000370085 IGKV2D-30A0A075B6S6 120 aa7□□□□□ -1.29
SSR4-202ENST00000370085 IGKV2-30P06310 120 aa7□□□□□ -1.29
SSR4-202ENST00000370085 M0R2T5 61 aa6.99□□□□□ -1.29
SSR4-202ENST00000370085 Q5W150 140 aa6.99□□□□□ -1.29
SSR4-202ENST00000370085 MPLKIPQ8TAP9 179 aa6.98□□□□□ -1.29
SSR4-202ENST00000370085 MT1HP80294 61 aa6.97□□□□□ -1.29
SSR4-202ENST00000370085 A0A087WVE0 104 aa6.93□□□□□ -1.3
SSR4-202ENST00000370085 FLGP20930 4061 aaPredicted RBP6.91□□□□□ -1.3
SSR4-202ENST00000370085 TRAV22A0A0B4J277 110 aa6.91□□□□□ -1.3
SSR4-202ENST00000370085 UQCRQO14949 82 aa6.91□□□□□ -1.3
SSR4-202ENST00000370085 ATOX1O00244 68 aa6.88□□□□□ -1.31
SSR4-202ENST00000370085 IMUPQ9GZP8 106 aa6.88□□□□□ -1.31
SSR4-202ENST00000370085 LOC101927531A0A1B0GV80 90 aa6.86□□□□□ -1.31
SSR4-202ENST00000370085 SCGB1A1P11684 91 aa6.86□□□□□ -1.31
SSR4-202ENST00000370085 H0Y9P7 68 aa6.84□□□□□ -1.31
SSR4-202ENST00000370085 MP68P56378 58 aa6.82□□□□□ -1.32
SSR4-202ENST00000370085 H1FX-AS1Q4G0G2 97 aa6.82□□□□□ -1.32
SSR4-202ENST00000370085 KRTAP10-6P60371 365 aaPredicted RBP6.81□□□□□ -1.32
SSR4-202ENST00000370085 C4orf26Q17RF5 130 aa6.81□□□□□ -1.32
SSR4-202ENST00000370085 MT-ATP8P03928 68 aa6.8□□□□□ -1.32
SSR4-202ENST00000370085 CYP4F30PQ9H0H9 118 aa6.8□□□□□ -1.32
SSR4-202ENST00000370085 OCR1Q9BZK8 76 aa6.79□□□□□ -1.32
SSR4-202ENST00000370085 LORP23490 312 aaPredicted RBP6.78□□□□□ -1.32
SSR4-202ENST00000370085 C5orf47Q569G3 176 aa6.78□□□□□ -1.32
SSR4-202ENST00000370085 C1orf64Q8NEQ6 169 aa6.77□□□□□ -1.33
SSR4-202ENST00000370085 SMIM20Q8N5G0 67 aa6.75□□□□□ -1.33
SSR4-202ENST00000370085 LINC00208Q96KT6 92 aa6.75□□□□□ -1.33
SSR4-202ENST00000370085 H3BPC8 53 aa6.74□□□□□ -1.33
SSR4-202ENST00000370085 FAM236AA0A1B0GUQ0 79 aa6.72□□□□□ -1.33
SSR4-202ENST00000370085 FAM236BA0A1B0GV22 79 aa6.72□□□□□ -1.33
SSR4-202ENST00000370085 TRAV7A0A075B6U4 112 aa6.66□□□□□ -1.34
SSR4-202ENST00000370085 S4R3F8 94 aa6.66□□□□□ -1.34
SSR4-202ENST00000370085 KRTAP9-2Q9BYQ4 174 aa6.65□□□□□ -1.34
SSR4-202ENST00000370085 LCE2DQ5TA82 110 aaPredicted RBP6.64□□□□□ -1.35
SSR4-202ENST00000370085 KRTAP3-1Q9BYR8 98 aa6.64□□□□□ -1.35
SSR4-202ENST00000370085 A8MUN3 132 aa6.63□□□□□ -1.35
SSR4-202ENST00000370085 KRTAP9-8Q9BYQ0 159 aa6.62□□□□□ -1.35
SSR4-202ENST00000370085 KLKP1Q107X0 134 aa6.61□□□□□ -1.35
SSR4-202ENST00000370085 CSAG1Q6PB30 78 aa6.59□□□□□ -1.35
SSR4-202ENST00000370085 KRTAP10-10P60014 251 aa6.58□□□□□ -1.36
SSR4-202ENST00000370085 MT2AP02795 61 aa6.57□□□□□ -1.36
SSR4-202ENST00000370085 LCA10Q71F78 164 aa6.57□□□□□ -1.36
SSR4-202ENST00000370085 SERP2Q8N6R1 65 aa6.55□□□□□ -1.36
SSR4-202ENST00000370085 NDUFC1O43677 76 aa6.52□□□□□ -1.37
SSR4-202ENST00000370085 MT1FP04733 61 aa6.51□□□□□ -1.37
SSR4-202ENST00000370085 DMAC1Q96GE9 116 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms