RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 CCKP06307 115 aa7.87□□□□□ -1.15
DDX55-202ENST00000354291 UBE2V1Q13404 147 aa7.87□□□□□ -1.15
DDX55-202ENST00000354291 MUC12Q9UKN1 5478 aa7.87□□□□□ -1.15
DDX55-202ENST00000354291 UQCR10Q9UDW1 63 aa7.86□□□□□ -1.15
DDX55-202ENST00000354291 LINC00472Q9H8W2 130 aa7.85□□□□□ -1.15
DDX55-202ENST00000354291 KRTAP16-1A8MUX0 517 aa7.83□□□□□ -1.16
DDX55-202ENST00000354291 SCGB1C2P0DMR2 95 aa7.83□□□□□ -1.16
DDX55-202ENST00000354291 DEFB116Q30KQ4 102 aa7.83□□□□□ -1.16
DDX55-202ENST00000354291 KRTAP20-1Q3LI63 56 aa7.83□□□□□ -1.16
DDX55-202ENST00000354291 RBM3P98179 157 aaKnown RBP7.81□□□□□ -1.16
DDX55-202ENST00000354291 IGHV6-1A0A0B4J1U7 121 aa7.8□□□□□ -1.16
DDX55-202ENST00000354291 NOTCH2NLQ7Z3S9 236 aa7.8□□□□□ -1.16
DDX55-202ENST00000354291 DSCR8Q96T75 97 aa7.8□□□□□ -1.16
DDX55-202ENST00000354291 VPS25Q9BRG1 176 aa7.79□□□□□ -1.16
DDX55-202ENST00000354291 RBM12B-AS1Q9P1G2 102 aa7.78□□□□□ -1.16
DDX55-202ENST00000354291 C21orf62-AS1Q17RA5 79 aa7.77□□□□□ -1.17
DDX55-202ENST00000354291 C8orf87E5RJ46 101 aa7.76□□□□□ -1.17
DDX55-202ENST00000354291 TMA7Q9Y2S6 64 aaKnown RBP7.76□□□□□ -1.17
DDX55-202ENST00000354291 A0A1B0GVX0 72 aa7.75□□□□□ -1.17
DDX55-202ENST00000354291 BAALC-AS2P0C853 105 aa7.75□□□□□ -1.17
DDX55-202ENST00000354291 C9JAW5 83 aa7.74□□□□□ -1.17
DDX55-202ENST00000354291 J3KT08 172 aa7.73□□□□□ -1.17
DDX55-202ENST00000354291 MPLKIPQ8TAP9 179 aa7.72□□□□□ -1.17
DDX55-202ENST00000354291 HRES1P13985 223 aa7.71□□□□□ -1.18
DDX55-202ENST00000354291 Q6ZQT0 140 aa7.7□□□□□ -1.18
DDX55-202ENST00000354291 JMJD7-PLA2G4BH0Y9G9 81 aa7.67□□□□□ -1.18
DDX55-202ENST00000354291 NDUFB1O75438 58 aa7.67□□□□□ -1.18
DDX55-202ENST00000354291 ATXN8Q156A1 80 aa7.67□□□□□ -1.18
DDX55-202ENST00000354291 A0A1B0GW54 56 aa7.66□□□□□ -1.18
DDX55-202ENST00000354291 M0R143 59 aa7.66□□□□□ -1.18
DDX55-202ENST00000354291 MTURNQ8N3F0 131 aa7.66□□□□□ -1.18
DDX55-202ENST00000354291 Q8N9P0 234 aaPredicted RBP7.66□□□□□ -1.18
DDX55-202ENST00000354291 ZCCHC13Q8WW36 166 aaKnown RBP7.66□□□□□ -1.18
DDX55-202ENST00000354291 LOC110117498A0A087WWA1 95 aa7.63□□□□□ -1.19
DDX55-202ENST00000354291 PDE6GP18545 87 aa7.63□□□□□ -1.19
DDX55-202ENST00000354291 SPINK7P58062 85 aa7.61□□□□□ -1.19
DDX55-202ENST00000354291 A8MWP4 228 aa7.6□□□□□ -1.19
DDX55-202ENST00000354291 NAA38Q9BRA0 125 aaKnown RBP7.6□□□□□ -1.19
DDX55-202ENST00000354291 C8orf17Q9NRJ1 99 aa7.59□□□□□ -1.19
DDX55-202ENST00000354291 LYRM7Q5U5X0 104 aa7.58□□□□□ -1.2
DDX55-202ENST00000354291 MDN1Q9NU22 5596 aa7.57□□□□□ -1.2
DDX55-202ENST00000354291 C14orf132Q9NPU4 83 aa7.56□□□□□ -1.2
DDX55-202ENST00000354291 IGKV3D-7A0A0C4DH55 119 aa7.55□□□□□ -1.2
DDX55-202ENST00000354291 NREPQ16612 68 aa7.54□□□□□ -1.2
DDX55-202ENST00000354291 Q6ZVQ6 151 aa7.54□□□□□ -1.2
DDX55-202ENST00000354291 SMIM6P0DI80 62 aa7.52□□□□□ -1.21
DDX55-202ENST00000354291 PRR15Q8IV56 129 aa7.52□□□□□ -1.21
DDX55-202ENST00000354291 KMT2DO14686 5537 aa7.5□□□□□ -1.21
DDX55-202ENST00000354291 WFDC13Q8IUB5 93 aa7.49□□□□□ -1.21
DDX55-202ENST00000354291 TSTD3H0UI37 97 aa7.47□□□□□ -1.21
DDX55-202ENST00000354291 TMEM254Q8TBM7 123 aa7.47□□□□□ -1.21
DDX55-202ENST00000354291 A6NN06 94 aa7.46□□□□□ -1.22
DDX55-202ENST00000354291 BATFQ16520 125 aa7.46□□□□□ -1.22
DDX55-202ENST00000354291 MRPL34Q9BQ48 92 aaKnown RBP7.46□□□□□ -1.22
DDX55-202ENST00000354291 MMP24-AS1A0A0U1RRL7 71 aa7.45□□□□□ -1.22
DDX55-202ENST00000354291 KRTAP2-3P0C7H8 128 aa7.44□□□□□ -1.22
DDX55-202ENST00000354291 KRTAP2-4Q9BYR9 128 aa7.44□□□□□ -1.22
DDX55-202ENST00000354291 hDV103S1A0JD37 113 aa7.43□□□□□ -1.22
DDX55-202ENST00000354291 H3BT86 120 aa7.43□□□□□ -1.22
DDX55-202ENST00000354291 LOC105371267A0A1B0GV96 52 aa7.42□□□□□ -1.22
DDX55-202ENST00000354291 C9orf118A6NHY6 69 aa7.41□□□□□ -1.22
DDX55-202ENST00000354291 K7EQZ3 153 aa7.41□□□□□ -1.22
DDX55-202ENST00000354291 NDUFS5O43920 106 aa7.4□□□□□ -1.22
DDX55-202ENST00000354291 KRTAP5-9P26371 169 aa7.39□□□□□ -1.23
DDX55-202ENST00000354291 A0A1W2PPM0 123 aa7.38□□□□□ -1.23
DDX55-202ENST00000354291 BPY2O14599 106 aa7.38□□□□□ -1.23
DDX55-202ENST00000354291 TAX1BP3O14907 124 aa7.36□□□□□ -1.23
DDX55-202ENST00000354291 H1FX-AS1Q4G0G2 97 aa7.36□□□□□ -1.23
DDX55-202ENST00000354291 IGKV2D-30A0A075B6S6 120 aa7.31□□□□□ -1.24
DDX55-202ENST00000354291 IGKV2-30P06310 120 aa7.31□□□□□ -1.24
DDX55-202ENST00000354291 C7orf65Q6ZTY9 151 aa7.31□□□□□ -1.24
DDX55-202ENST00000354291 Q5W150 140 aa7.3□□□□□ -1.24
DDX55-202ENST00000354291 CASC2Q6XLA1 102 aa7.29□□□□□ -1.24
DDX55-202ENST00000354291 Q8N9L7 120 aa7.27□□□□□ -1.25
DDX55-202ENST00000354291 SPCS1Q9Y6A9 102 aa7.27□□□□□ -1.25
DDX55-202ENST00000354291 HCG22E2RYF7 251 aa7.25□□□□□ -1.25
DDX55-202ENST00000354291 CXCL6P80162 114 aa7.24□□□□□ -1.25
DDX55-202ENST00000354291 MT1BP07438 61 aa7.23□□□□□ -1.25
DDX55-202ENST00000354291 SMCPP49901 116 aaPredicted RBP7.22□□□□□ -1.25
DDX55-202ENST00000354291 Q5VV11 94 aa7.21□□□□□ -1.26
DDX55-202ENST00000354291 UBL5Q9BZL1 73 aa7.21□□□□□ -1.26
DDX55-202ENST00000354291 KRTAP10-5P60370 271 aa7.2□□□□□ -1.26
DDX55-202ENST00000354291 C4orf26Q17RF5 130 aa7.2□□□□□ -1.26
DDX55-202ENST00000354291 COL5A1-AS1Q5SY13 56 aa7.17□□□□□ -1.26
DDX55-202ENST00000354291 KRTAP2-2Q9BYT5 123 aa7.16□□□□□ -1.26
DDX55-202ENST00000354291 KRTAP2-1Q9BYU5 128 aa7.16□□□□□ -1.26
DDX55-202ENST00000354291 SPRR2EP22531 72 aa7.15□□□□□ -1.26
DDX55-202ENST00000354291 SPRR2BP35325 72 aa7.15□□□□□ -1.26
DDX55-202ENST00000354291 SPRR2AP35326 72 aa7.15□□□□□ -1.26
DDX55-202ENST00000354291 PRO0461Q9UI25 63 aa7.15□□□□□ -1.26
DDX55-202ENST00000354291 FAM236AA0A1B0GUQ0 79 aa7.11□□□□□ -1.27
DDX55-202ENST00000354291 FAM236BA0A1B0GV22 79 aa7.11□□□□□ -1.27
DDX55-202ENST00000354291 K7EP34 96 aa7.11□□□□□ -1.27
DDX55-202ENST00000354291 C5orf47Q569G3 176 aa7.1□□□□□ -1.27
DDX55-202ENST00000354291 KRTAP19-8Q3LI54 63 aa7.09□□□□□ -1.27
DDX55-202ENST00000354291 SPRR2FQ96RM1 72 aa7.09□□□□□ -1.27
DDX55-202ENST00000354291 TP53AIP1Q9HCN2 124 aa7.09□□□□□ -1.27
DDX55-202ENST00000354291 KRTAP3-1Q9BYR8 98 aa7.07□□□□□ -1.28
DDX55-202ENST00000354291 S4R3F8 94 aa7.07□□□□□ -1.28
DDX55-202ENST00000354291 CSAG1Q6PB30 78 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms