RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 A8MUU9 505 aa10.16□□□□□ -0.78
SYNE4-202ENST00000340477 C8orf87E5RJ46 101 aa10.15□□□□□ -0.78
SYNE4-202ENST00000340477 A0A1B0GVX0 72 aa10.14□□□□□ -0.79
SYNE4-202ENST00000340477 NDUFB1O75438 58 aa10.14□□□□□ -0.79
SYNE4-202ENST00000340477 LCE2AQ5TA79 106 aaPredicted RBP10.14□□□□□ -0.79
SYNE4-202ENST00000340477 PCP4L1A6NKN8 68 aa10.12□□□□□ -0.79
SYNE4-202ENST00000340477 NREPQ16612 68 aa10.1□□□□□ -0.79
SYNE4-202ENST00000340477 KRTAP16-1A8MUX0 517 aa10.07□□□□□ -0.8
SYNE4-202ENST00000340477 K7EP34 96 aa10.06□□□□□ -0.8
SYNE4-202ENST00000340477 COX6B2Q6YFQ2 88 aa10.06□□□□□ -0.8
SYNE4-202ENST00000340477 NOTCH2NLQ7Z3S9 236 aa10.06□□□□□ -0.8
SYNE4-202ENST00000340477 A8MWP4 228 aa10.05□□□□□ -0.8
SYNE4-202ENST00000340477 GTF2H5Q6ZYL4 71 aa10.03□□□□□ -0.8
SYNE4-202ENST00000340477 SMCPP49901 116 aaPredicted RBP9.98□□□□□ -0.81
SYNE4-202ENST00000340477 KRTAP19-2Q3LHN2 52 aa9.98□□□□□ -0.81
SYNE4-202ENST00000340477 LCE2CQ5TA81 110 aa9.98□□□□□ -0.81
SYNE4-202ENST00000340477 C8orf17Q9NRJ1 99 aa9.98□□□□□ -0.81
SYNE4-202ENST00000340477 IGKV3D-7A0A0C4DH55 119 aa9.97□□□□□ -0.81
SYNE4-202ENST00000340477 PRO0461Q9UI25 63 aa9.96□□□□□ -0.82
SYNE4-202ENST00000340477 PRR15Q8IV56 129 aa9.95□□□□□ -0.82
SYNE4-202ENST00000340477 BPY2O14599 106 aa9.94□□□□□ -0.82
SYNE4-202ENST00000340477 Q6ZVQ6 151 aa9.91□□□□□ -0.82
SYNE4-202ENST00000340477 MT1HP80294 61 aa9.9□□□□□ -0.82
SYNE4-202ENST00000340477 F8W1H4 67 aa9.89□□□□□ -0.83
SYNE4-202ENST00000340477 ZCCHC13Q8WW36 166 aaKnown RBP9.89□□□□□ -0.83
SYNE4-202ENST00000340477 Q8N9P0 234 aaPredicted RBP9.88□□□□□ -0.83
SYNE4-202ENST00000340477 K7EQZ3 153 aa9.87□□□□□ -0.83
SYNE4-202ENST00000340477 M0R2T5 61 aa9.87□□□□□ -0.83
SYNE4-202ENST00000340477 UBL5Q9BZL1 73 aa9.87□□□□□ -0.83
SYNE4-202ENST00000340477 TMEM254Q8TBM7 123 aa9.86□□□□□ -0.83
SYNE4-202ENST00000340477 MMP24-AS1A0A0U1RRL7 71 aa9.85□□□□□ -0.83
SYNE4-202ENST00000340477 MRPL34Q9BQ48 92 aaKnown RBP9.84□□□□□ -0.83
SYNE4-202ENST00000340477 hDV103S1A0JD37 113 aa9.83□□□□□ -0.84
SYNE4-202ENST00000340477 FAM236DA0A1B0GTK5 79 aa9.82□□□□□ -0.84
SYNE4-202ENST00000340477 FAM236CP0DP71 79 aa9.82□□□□□ -0.84
SYNE4-202ENST00000340477 RBM12B-AS1Q9P1G2 102 aa9.82□□□□□ -0.84
SYNE4-202ENST00000340477 NDUFS5O43920 106 aa9.8□□□□□ -0.84
SYNE4-202ENST00000340477 ETDBQ3ZM63 59 aa9.8□□□□□ -0.84
SYNE4-202ENST00000340477 LINC00846Q9NV44 126 aa9.8□□□□□ -0.84
SYNE4-202ENST00000340477 FLGP20930 4061 aaPredicted RBP9.75□□□□□ -0.85
SYNE4-202ENST00000340477 Q8N9L7 120 aa9.75□□□□□ -0.85
SYNE4-202ENST00000340477 HRES1P13985 223 aa9.74□□□□□ -0.85
SYNE4-202ENST00000340477 SPINK7P58062 85 aa9.74□□□□□ -0.85
SYNE4-202ENST00000340477 CASC2Q6XLA1 102 aa9.74□□□□□ -0.85
SYNE4-202ENST00000340477 WFDC13Q8IUB5 93 aa9.73□□□□□ -0.85
SYNE4-202ENST00000340477 KRTAP9-2Q9BYQ4 174 aa9.73□□□□□ -0.85
SYNE4-202ENST00000340477 KRTAP10-6P60371 365 aaPredicted RBP9.69□□□□□ -0.86
SYNE4-202ENST00000340477 MPLKIPQ8TAP9 179 aa9.68□□□□□ -0.86
SYNE4-202ENST00000340477 HCG22E2RYF7 251 aa9.66□□□□□ -0.86
SYNE4-202ENST00000340477 LORP23490 312 aaPredicted RBP9.65□□□□□ -0.86
SYNE4-202ENST00000340477 CXCL6P80162 114 aa9.65□□□□□ -0.86
SYNE4-202ENST00000340477 ACYP1P07311 99 aa9.63□□□□□ -0.87
SYNE4-202ENST00000340477 LCE2DQ5TA82 110 aaPredicted RBP9.58□□□□□ -0.88
SYNE4-202ENST00000340477 IGKV2D-30A0A075B6S6 120 aa9.57□□□□□ -0.88
SYNE4-202ENST00000340477 FAM240AA0A1B0GVK7 77 aa9.57□□□□□ -0.88
SYNE4-202ENST00000340477 IGKV2-30P06310 120 aa9.57□□□□□ -0.88
SYNE4-202ENST00000340477 C7orf65Q6ZTY9 151 aa9.57□□□□□ -0.88
SYNE4-202ENST00000340477 Q5W150 140 aa9.54□□□□□ -0.88
SYNE4-202ENST00000340477 A0A1B0GV90 55 aa9.53□□□□□ -0.88
SYNE4-202ENST00000340477 ATP5EP2Q5VTU8 51 aa9.53□□□□□ -0.88
SYNE4-202ENST00000340477 TP53AIP1Q9HCN2 124 aa9.5□□□□□ -0.89
SYNE4-202ENST00000340477 HIST1H4AP62805 103 aaKnown RBP9.42□□□□□ -0.9
SYNE4-202ENST00000340477 H1FX-AS1Q4G0G2 97 aa9.39□□□□□ -0.91
SYNE4-202ENST00000340477 LINC00643Q86TS7 51 aa9.38□□□□□ -0.91
SYNE4-202ENST00000340477 J3QR89 54 aa9.37□□□□□ -0.91
SYNE4-202ENST00000340477 KRTAP9-8Q9BYQ0 159 aa9.37□□□□□ -0.91
SYNE4-202ENST00000340477 KRTAP9-6A0A140TA67 174 aa9.35□□□□□ -0.91
SYNE4-202ENST00000340477 C4orf26Q17RF5 130 aa9.33□□□□□ -0.92
SYNE4-202ENST00000340477 TRAV22A0A0B4J277 110 aa9.3□□□□□ -0.92
SYNE4-202ENST00000340477 MT2AP02795 61 aa9.3□□□□□ -0.92
SYNE4-202ENST00000340477 UQCRQO14949 82 aa9.25□□□□□ -0.93
SYNE4-202ENST00000340477 KRTAP10-10P60014 251 aa9.25□□□□□ -0.93
SYNE4-202ENST00000340477 CRCT1Q9UGL9 99 aa9.25□□□□□ -0.93
SYNE4-202ENST00000340477 A0A087WVE0 104 aa9.24□□□□□ -0.93
SYNE4-202ENST00000340477 LOC101927531A0A1B0GV80 90 aa9.24□□□□□ -0.93
SYNE4-202ENST00000340477 ATOX1O00244 68 aa9.22□□□□□ -0.93
SYNE4-202ENST00000340477 C1orf64Q8NEQ6 169 aa9.22□□□□□ -0.93
SYNE4-202ENST00000340477 MT1FP04733 61 aa9.21□□□□□ -0.94
SYNE4-202ENST00000340477 CYP4F30PQ9H0H9 118 aa9.2□□□□□ -0.94
SYNE4-202ENST00000340477 H0Y9P7 68 aa9.19□□□□□ -0.94
SYNE4-202ENST00000340477 FSIP2Q5CZC0 6907 aa9.18□□□□□ -0.94
SYNE4-202ENST00000340477 S4R3F8 94 aa9.15□□□□□ -0.94
SYNE4-202ENST00000340477 KRTAP3-1Q9BYR8 98 aa9.11□□□□□ -0.95
SYNE4-202ENST00000340477 MP68P56378 58 aa9.1□□□□□ -0.95
SYNE4-202ENST00000340477 K7ERU9 68 aa9.08□□□□□ -0.96
SYNE4-202ENST00000340477 C5orf47Q569G3 176 aa9.08□□□□□ -0.96
SYNE4-202ENST00000340477 KRTAP9-3Q9BYQ3 159 aa9.07□□□□□ -0.96
SYNE4-202ENST00000340477 SCGB1A1P11684 91 aa9.06□□□□□ -0.96
SYNE4-202ENST00000340477 OCR1Q9BZK8 76 aa9.06□□□□□ -0.96
SYNE4-202ENST00000340477 CSAG1Q6PB30 78 aa9.05□□□□□ -0.96
SYNE4-202ENST00000340477 LINC00208Q96KT6 92 aa9.05□□□□□ -0.96
SYNE4-202ENST00000340477 LCA10Q71F78 164 aa9.03□□□□□ -0.96
SYNE4-202ENST00000340477 FAM236AA0A1B0GUQ0 79 aa8.98□□□□□ -0.97
SYNE4-202ENST00000340477 FAM236BA0A1B0GV22 79 aa8.98□□□□□ -0.97
SYNE4-202ENST00000340477 IMUPQ9GZP8 106 aa8.98□□□□□ -0.97
SYNE4-202ENST00000340477 LCE2BO14633 110 aa8.97□□□□□ -0.97
SYNE4-202ENST00000340477 H3BPC8 53 aa8.96□□□□□ -0.98
SYNE4-202ENST00000340477 USH2AO75445 5202 aa8.96□□□□□ -0.98
SYNE4-202ENST00000340477 A8MUN3 132 aa8.94□□□□□ -0.98
SYNE4-202ENST00000340477 MT-ATP8P03928 68 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms