RNA–Protein interactions for RNA: ENST00000257632.9

UPK3B-201, Transcript of uroplakin 3B, humanhuman

APPRIS P5 TSL 2 BASIC

Gene UPK3B, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-201ENST00000257632 LINC00313P59037 77 aa9.93□□□□□ -0.82
UPK3B-201ENST00000257632 IGHV6-1A0A0B4J1U7 121 aa9.91□□□□□ -0.82
UPK3B-201ENST00000257632 J3KT08 172 aa9.9□□□□□ -0.82
UPK3B-201ENST00000257632 C20orf166-AS1Q96NR2 134 aa9.9□□□□□ -0.82
UPK3B-201ENST00000257632 A8MUU9 505 aa9.88□□□□□ -0.83
UPK3B-201ENST00000257632 A0A1B0GVX0 72 aa9.86□□□□□ -0.83
UPK3B-201ENST00000257632 C8orf87E5RJ46 101 aa9.85□□□□□ -0.83
UPK3B-201ENST00000257632 NOTCH2NLQ7Z3S9 236 aa9.85□□□□□ -0.83
UPK3B-201ENST00000257632 NDUFB1O75438 58 aa9.84□□□□□ -0.83
UPK3B-201ENST00000257632 K7EP34 96 aa9.83□□□□□ -0.84
UPK3B-201ENST00000257632 NREPQ16612 68 aa9.83□□□□□ -0.84
UPK3B-201ENST00000257632 KRTAP16-1A8MUX0 517 aa9.82□□□□□ -0.84
UPK3B-201ENST00000257632 SMCPP49901 116 aaPredicted RBP9.79□□□□□ -0.84
UPK3B-201ENST00000257632 A8MWP4 228 aa9.78□□□□□ -0.84
UPK3B-201ENST00000257632 GTF2H5Q6ZYL4 71 aa9.77□□□□□ -0.85
UPK3B-201ENST00000257632 PRO0461Q9UI25 63 aa9.75□□□□□ -0.85
UPK3B-201ENST00000257632 KRTAP19-2Q3LHN2 52 aa9.74□□□□□ -0.85
UPK3B-201ENST00000257632 COX6B2Q6YFQ2 88 aa9.74□□□□□ -0.85
UPK3B-201ENST00000257632 LCE2CQ5TA81 110 aa9.73□□□□□ -0.85
UPK3B-201ENST00000257632 IGKV3D-7A0A0C4DH55 119 aa9.72□□□□□ -0.85
UPK3B-201ENST00000257632 C8orf17Q9NRJ1 99 aa9.72□□□□□ -0.85
UPK3B-201ENST00000257632 PRR15Q8IV56 129 aa9.69□□□□□ -0.86
UPK3B-201ENST00000257632 BPY2O14599 106 aa9.67□□□□□ -0.86
UPK3B-201ENST00000257632 Q6ZVQ6 151 aa9.66□□□□□ -0.86
UPK3B-201ENST00000257632 A0A1B0GV90 55 aa9.65□□□□□ -0.86
UPK3B-201ENST00000257632 F8W1H4 67 aa9.65□□□□□ -0.86
UPK3B-201ENST00000257632 LCE2DQ5TA82 110 aaPredicted RBP9.64□□□□□ -0.87
UPK3B-201ENST00000257632 K7EQZ3 153 aa9.63□□□□□ -0.87
UPK3B-201ENST00000257632 MT1HP80294 61 aa9.63□□□□□ -0.87
UPK3B-201ENST00000257632 Q8N9P0 234 aaPredicted RBP9.63□□□□□ -0.87
UPK3B-201ENST00000257632 ZCCHC13Q8WW36 166 aaKnown RBP9.61□□□□□ -0.87
UPK3B-201ENST00000257632 MMP24-AS1A0A0U1RRL7 71 aa9.6□□□□□ -0.87
UPK3B-201ENST00000257632 UBL5Q9BZL1 73 aa9.6□□□□□ -0.87
UPK3B-201ENST00000257632 ETDBQ3ZM63 59 aa9.59□□□□□ -0.87
UPK3B-201ENST00000257632 TMEM254Q8TBM7 123 aa9.58□□□□□ -0.88
UPK3B-201ENST00000257632 MRPL34Q9BQ48 92 aaKnown RBP9.58□□□□□ -0.88
UPK3B-201ENST00000257632 LINC00846Q9NV44 126 aa9.58□□□□□ -0.88
UPK3B-201ENST00000257632 CRCT1Q9UGL9 99 aa9.57□□□□□ -0.88
UPK3B-201ENST00000257632 hDV103S1A0JD37 113 aa9.56□□□□□ -0.88
UPK3B-201ENST00000257632 M0R2T5 61 aa9.56□□□□□ -0.88
UPK3B-201ENST00000257632 Q8N9L7 120 aa9.54□□□□□ -0.88
UPK3B-201ENST00000257632 NDUFS5O43920 106 aa9.53□□□□□ -0.88
UPK3B-201ENST00000257632 FAM236DA0A1B0GTK5 79 aa9.52□□□□□ -0.89
UPK3B-201ENST00000257632 FAM236CP0DP71 79 aa9.52□□□□□ -0.89
UPK3B-201ENST00000257632 RBM12B-AS1Q9P1G2 102 aa9.51□□□□□ -0.89
UPK3B-201ENST00000257632 WFDC13Q8IUB5 93 aa9.5□□□□□ -0.89
UPK3B-201ENST00000257632 FSIP2Q5CZC0 6907 aa9.5□□□□□ -0.89
UPK3B-201ENST00000257632 HRES1P13985 223 aa9.49□□□□□ -0.89
UPK3B-201ENST00000257632 SPINK7P58062 85 aa9.48□□□□□ -0.89
UPK3B-201ENST00000257632 CASC2Q6XLA1 102 aa9.47□□□□□ -0.89
UPK3B-201ENST00000257632 MPLKIPQ8TAP9 179 aa9.43□□□□□ -0.9
UPK3B-201ENST00000257632 KRTAP10-6P60371 365 aaPredicted RBP9.42□□□□□ -0.9
UPK3B-201ENST00000257632 FLGP20930 4061 aaPredicted RBP9.41□□□□□ -0.9
UPK3B-201ENST00000257632 HCG22E2RYF7 251 aa9.4□□□□□ -0.9
UPK3B-201ENST00000257632 LORP23490 312 aaPredicted RBP9.38□□□□□ -0.91
UPK3B-201ENST00000257632 CXCL6P80162 114 aa9.38□□□□□ -0.91
UPK3B-201ENST00000257632 ACYP1P07311 99 aa9.37□□□□□ -0.91
UPK3B-201ENST00000257632 FAM240AA0A1B0GVK7 77 aa9.32□□□□□ -0.92
UPK3B-201ENST00000257632 Q5W150 140 aa9.32□□□□□ -0.92
UPK3B-201ENST00000257632 IGKV2D-30A0A075B6S6 120 aa9.31□□□□□ -0.92
UPK3B-201ENST00000257632 IGKV2-30P06310 120 aa9.31□□□□□ -0.92
UPK3B-201ENST00000257632 C7orf65Q6ZTY9 151 aa9.29□□□□□ -0.92
UPK3B-201ENST00000257632 ATP5EP2Q5VTU8 51 aa9.24□□□□□ -0.93
UPK3B-201ENST00000257632 TP53AIP1Q9HCN2 124 aa9.22□□□□□ -0.93
UPK3B-201ENST00000257632 HIST1H4AP62805 103 aaKnown RBP9.19□□□□□ -0.94
UPK3B-201ENST00000257632 LINC00643Q86TS7 51 aa9.15□□□□□ -0.94
UPK3B-201ENST00000257632 KRTAP9-8Q9BYQ0 159 aa9.13□□□□□ -0.95
UPK3B-201ENST00000257632 J3QR89 54 aa9.12□□□□□ -0.95
UPK3B-201ENST00000257632 H1FX-AS1Q4G0G2 97 aa9.12□□□□□ -0.95
UPK3B-201ENST00000257632 C4orf26Q17RF5 130 aa9.1□□□□□ -0.95
UPK3B-201ENST00000257632 A0A087WVE0 104 aa9.05□□□□□ -0.96
UPK3B-201ENST00000257632 K7ERU9 68 aa9.05□□□□□ -0.96
UPK3B-201ENST00000257632 TRAV22A0A0B4J277 110 aa9.04□□□□□ -0.96
UPK3B-201ENST00000257632 MT2AP02795 61 aa9.04□□□□□ -0.96
UPK3B-201ENST00000257632 UQCRQO14949 82 aa9□□□□□ -0.97
UPK3B-201ENST00000257632 KRTAP10-10P60014 251 aa8.98□□□□□ -0.97
UPK3B-201ENST00000257632 LOC101927531A0A1B0GV80 90 aa8.97□□□□□ -0.97
UPK3B-201ENST00000257632 MT1FP04733 61 aa8.97□□□□□ -0.97
UPK3B-201ENST00000257632 C1orf64Q8NEQ6 169 aa8.97□□□□□ -0.97
UPK3B-201ENST00000257632 CYP4F30PQ9H0H9 118 aa8.97□□□□□ -0.97
UPK3B-201ENST00000257632 H0Y9P7 68 aa8.95□□□□□ -0.98
UPK3B-201ENST00000257632 ATOX1O00244 68 aa8.93□□□□□ -0.98
UPK3B-201ENST00000257632 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.92□□□□□ -0.98
UPK3B-201ENST00000257632 KRTAP9-7A8MTY7 169 aa8.91□□□□□ -0.98
UPK3B-201ENST00000257632 KRTAP3-1Q9BYR8 98 aa8.91□□□□□ -0.98
UPK3B-201ENST00000257632 S4R3F8 94 aa8.88□□□□□ -0.99
UPK3B-201ENST00000257632 USH2AO75445 5202 aa8.87□□□□□ -0.99
UPK3B-201ENST00000257632 SSPOA2VEC9 5147 aa8.84□□□□□ -0.99
UPK3B-201ENST00000257632 C5orf47Q569G3 176 aa8.84□□□□□ -0.99
UPK3B-201ENST00000257632 OCR1Q9BZK8 76 aa8.84□□□□□ -0.99
UPK3B-201ENST00000257632 MP68P56378 58 aa8.83□□□□□ -1
UPK3B-201ENST00000257632 LINC00208Q96KT6 92 aa8.83□□□□□ -1
UPK3B-201ENST00000257632 KRTAP9-3Q9BYQ3 159 aa8.83□□□□□ -1
UPK3B-201ENST00000257632 SCGB1A1P11684 91 aa8.82□□□□□ -1
UPK3B-201ENST00000257632 MT-ATP8P03928 68 aa8.81□□□□□ -1
UPK3B-201ENST00000257632 LCA10Q71F78 164 aa8.79□□□□□ -1
UPK3B-201ENST00000257632 CSAG1Q6PB30 78 aa8.78□□□□□ -1
UPK3B-201ENST00000257632 IMUPQ9GZP8 106 aa8.77□□□□□ -1.01
UPK3B-201ENST00000257632 LCE2BO14633 110 aa8.74□□□□□ -1.01
UPK3B-201ENST00000257632 KLKP1Q107X0 134 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms