RNA–Protein interactions for RNA: ENST00000610623.4

TP53-220, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-220ENST00000610623 Q9BRP9 147 aa7.67□□□□□ -1.18
TP53-220ENST00000610623 KRTAP4-16G5E9R7 235 aaPredicted RBP7.66□□□□□ -1.18
TP53-220ENST00000610623 LINC00208Q96KT6 92 aa7.66□□□□□ -1.18
TP53-220ENST00000610623 A8MU10 97 aa7.66□□□□□ -1.18
TP53-220ENST00000610623 C16orf90A8MZG2 172 aa7.66□□□□□ -1.18
TP53-220ENST00000610623 ATP11AUNQ6ZP68 121 aa7.65□□□□□ -1.18
TP53-220ENST00000610623 RETNQ9HD89 108 aa7.65□□□□□ -1.18
TP53-220ENST00000610623 NBEAL2Q6ZNJ1 2754 aa7.65□□□□□ -1.19
TP53-220ENST00000610623 SPRR1AP35321 89 aa7.64□□□□□ -1.19
TP53-220ENST00000610623 NDUFS5O43920 106 aa7.62□□□□□ -1.19
TP53-220ENST00000610623 PRB2P02812 416 aaPredicted RBP7.62□□□□□ -1.19
TP53-220ENST00000610623 IGLV1-50A0A075B6I6 118 aa7.62□□□□□ -1.19
TP53-220ENST00000610623 PRR15LQ9BU68 103 aa7.62□□□□□ -1.19
TP53-220ENST00000610623 WFDC10BQ8IUB3 73 aa7.61□□□□□ -1.19
TP53-220ENST00000610623 IGLV5-37A0A075B6J1 123 aa7.61□□□□□ -1.19
TP53-220ENST00000610623 IGKV2D-24A0A075B6R9 120 aa7.61□□□□□ -1.19
TP53-220ENST00000610623 WFDC13Q8IUB5 93 aa7.61□□□□□ -1.19
TP53-220ENST00000610623 RBM12B-AS1Q9P1G2 102 aa7.61□□□□□ -1.19
TP53-220ENST00000610623 LOC101927531A0A1B0GV80 90 aa7.6□□□□□ -1.19
TP53-220ENST00000610623 TLX1NBP0CAT3 122 aa7.6□□□□□ -1.19
TP53-220ENST00000610623 KRTAP29-1A8MX34 341 aaPredicted RBP7.6□□□□□ -1.19
TP53-220ENST00000610623 PHF5AQ7RTV0 110 aaKnown RBP7.6□□□□□ -1.19
TP53-220ENST00000610623 RPL37AP8A6NKH3 93 aa7.59□□□□□ -1.19
TP53-220ENST00000610623 H0Y9P7 68 aa7.59□□□□□ -1.19
TP53-220ENST00000610623 LINC00476Q8WZB0 136 aa7.59□□□□□ -1.19
TP53-220ENST00000610623 SPTSSBQ8NFR3 76 aa7.58□□□□□ -1.2
TP53-220ENST00000610623 LCA10Q71F78 164 aa7.58□□□□□ -1.2
TP53-220ENST00000610623 C11orf45Q8TAV5 145 aa7.58□□□□□ -1.2
TP53-220ENST00000610623 DEFB116Q30KQ4 102 aa7.57□□□□□ -1.2
TP53-220ENST00000610623 SEC61BP60468 96 aaKnown RBP7.57□□□□□ -1.2
TP53-220ENST00000610623 C9orf163Q8N9P6 203 aa7.57□□□□□ -1.2
TP53-220ENST00000610623 DEFB131BA0A096LNP1 70 aa7.56□□□□□ -1.2
TP53-220ENST00000610623 A6NED7 52 aa7.56□□□□□ -1.2
TP53-220ENST00000610623 A6NN06 94 aa7.56□□□□□ -1.2
TP53-220ENST00000610623 TRRAPQ9Y4A5 3859 aa7.55□□□□□ -1.2
TP53-220ENST00000610623 IGFL1Q6UW32 110 aa7.55□□□□□ -1.2
TP53-220ENST00000610623 CDC42SE1Q9NRR8 79 aa7.55□□□□□ -1.2
TP53-220ENST00000610623 CASC2Q6XLA1 102 aa7.55□□□□□ -1.2
TP53-220ENST00000610623 IGLV8-61A0A075B6I0 122 aa7.53□□□□□ -1.2
TP53-220ENST00000610623 CMYA5Q8N3K9 4069 aa7.53□□□□□ -1.2
TP53-220ENST00000610623 COA5Q86WW8 74 aa7.53□□□□□ -1.2
TP53-220ENST00000610623 IGLV7-46A0A075B6I9 117 aa7.52□□□□□ -1.2
TP53-220ENST00000610623 A0A087WSZ3 146 aa7.52□□□□□ -1.2
TP53-220ENST00000610623 LINC01556Q5JQF7 62 aa7.52□□□□□ -1.2
TP53-220ENST00000610623 DNAH3Q8TD57 4116 aa7.52□□□□□ -1.21
TP53-220ENST00000610623 FLNBO75369 2602 aaKnown RBP7.52□□□□□ -1.21
TP53-220ENST00000610623 FAM168BA1KXE4 195 aa7.52□□□□□ -1.21
TP53-220ENST00000610623 FBN1P35555 2871 aaKnown RBP7.51□□□□□ -1.21
TP53-220ENST00000610623 RPL37AP61513 92 aaKnown RBP7.5□□□□□ -1.21
TP53-220ENST00000610623 REG3GQ6UW15 175 aa7.5□□□□□ -1.21
TP53-220ENST00000610623 KRTAP7-1Q8IUC3 87 aa7.5□□□□□ -1.21
TP53-220ENST00000610623 K7EIL1 84 aa7.49□□□□□ -1.21
TP53-220ENST00000610623 CNBPP62633 177 aaKnown RBP7.49□□□□□ -1.21
TP53-220ENST00000610623 C7orf65Q6ZTY9 151 aa7.49□□□□□ -1.21
TP53-220ENST00000610623 A0A0G2JQZ4 141 aa7.49□□□□□ -1.21
TP53-220ENST00000610623 A0A1W2PNN7 141 aa7.49□□□□□ -1.21
TP53-220ENST00000610623 DNAH10OSP0CZ25 163 aa7.49□□□□□ -1.21
TP53-220ENST00000610623 LINC01558Q9Y6Z2 57 aa7.49□□□□□ -1.21
TP53-220ENST00000610623 STAB1Q9NY15 2570 aa7.48□□□□□ -1.21
TP53-220ENST00000610623 A8MWP4 228 aa7.48□□□□□ -1.21
TP53-220ENST00000610623 MAST4O15021 2626 aa7.47□□□□□ -1.21
TP53-220ENST00000610623 BAHCC1Q9P281 2608 aa7.47□□□□□ -1.21
TP53-220ENST00000610623 PLAC8Q9NZF1 115 aa7.46□□□□□ -1.21
TP53-220ENST00000610623 MOBPQ13875 183 aa7.44□□□□□ -1.22
TP53-220ENST00000610623 LINC00472Q9H8W2 130 aa7.44□□□□□ -1.22
TP53-220ENST00000610623 PKD1L1Q8TDX9 2849 aa7.43□□□□□ -1.22
TP53-220ENST00000610623 TENM3Q9P273 2699 aa7.4□□□□□ -1.22
TP53-220ENST00000610623 SPAG11AQ6PDA7 123 aa7.4□□□□□ -1.22
TP53-220ENST00000610623 TP53AIP1Q9HCN2 124 aa7.4□□□□□ -1.22
TP53-220ENST00000610623 MMP24-AS1A0A0U1RRL7 71 aa7.39□□□□□ -1.23
TP53-220ENST00000610623 ANK2Q01484 3957 aa7.38□□□□□ -1.23
TP53-220ENST00000610623 PRLHP81277 87 aa7.37□□□□□ -1.23
TP53-220ENST00000610623 H0Y9J4 135 aa7.36□□□□□ -1.23
TP53-220ENST00000610623 SPRR1BP22528 89 aa7.36□□□□□ -1.23
TP53-220ENST00000610623 PCOTHQ58A44 107 aa7.36□□□□□ -1.23
TP53-220ENST00000610623 COL6A5A8TX70 2615 aa7.36□□□□□ -1.23
TP53-220ENST00000610623 Q6ZR54 194 aa7.35□□□□□ -1.23
TP53-220ENST00000610623 SPINK7P58062 85 aa7.35□□□□□ -1.23
TP53-220ENST00000610623 ASB16-AS1Q495Z4 193 aa7.35□□□□□ -1.23
TP53-220ENST00000610623 HUWE1Q7Z6Z7 4374 aaKnown RBP7.34□□□□□ -1.23
TP53-220ENST00000610623 CASC10Q5T4H9 136 aa7.34□□□□□ -1.23
TP53-220ENST00000610623 PRR26Q8N8Z3 221 aa7.34□□□□□ -1.23
TP53-220ENST00000610623 NOTCH1P46531 2555 aa7.32□□□□□ -1.24
TP53-220ENST00000610623 HRES1P13985 223 aa7.32□□□□□ -1.24
TP53-220ENST00000610623 IGKV2-24A0A0C4DH68 120 aa7.32□□□□□ -1.24
TP53-220ENST00000610623 C8orf87E5RJ46 101 aa7.3□□□□□ -1.24
TP53-220ENST00000610623 APLNQ9ULZ1 77 aa7.29□□□□□ -1.24
TP53-220ENST00000610623 NBEAL1Q6ZS30 2694 aa7.28□□□□□ -1.24
TP53-220ENST00000610623 UBE2DNLQ8IWF7 75 aa7.28□□□□□ -1.24
TP53-220ENST00000610623 LINC00313P59037 77 aa7.27□□□□□ -1.25
TP53-220ENST00000610623 A0A096LNI7 61 aa7.27□□□□□ -1.25
TP53-220ENST00000610623 DNAH1Q9P2D7 4330 aa7.27□□□□□ -1.25
TP53-220ENST00000610623 C8orf17Q9NRJ1 99 aa7.26□□□□□ -1.25
TP53-220ENST00000610623 KRTAP3-1Q9BYR8 98 aa7.25□□□□□ -1.25
TP53-220ENST00000610623 NUPR2A6NF83 97 aa7.24□□□□□ -1.25
TP53-220ENST00000610623 Q96NJ1 140 aa7.24□□□□□ -1.25
TP53-220ENST00000610623 A0A087X002 238 aa7.23□□□□□ -1.25
TP53-220ENST00000610623 C14orf177Q52M58 125 aa7.23□□□□□ -1.25
TP53-220ENST00000610623 DNAH9Q9NYC9 4486 aa7.22□□□□□ -1.25
TP53-220ENST00000610623 KRTAP1-5Q9BYS1 174 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms