RNA–Protein interactions for RNA: ENST00000578830.5

NUP85-208, Transcript of nucleoporin 85, human

TSL 5

Gene NUP85, Length 922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP85-208	ENST00000578830	PHF5A	Q7RTV0	110 aa	Known RBP	5.35	□□□□□ -1.55
NUP85-208	ENST00000578830	OR13C6P	Q8NH95	151 aa		5.35	□□□□□ -1.55
NUP85-208	ENST00000578830	PSORS1C2	Q9UIG4	136 aa		5.35	□□□□□ -1.55
NUP85-208	ENST00000578830	C22orf24	Q9Y442	160 aa		5.35	□□□□□ -1.55
NUP85-208	ENST00000578830	TRAV13-2	A0A0B4J235	113 aa		5.34	□□□□□ -1.55
NUP85-208	ENST00000578830	KRTAP23-1	A1A580	65 aa		5.34	□□□□□ -1.55
NUP85-208	ENST00000578830		M0R378	163 aa		5.34	□□□□□ -1.55
NUP85-208	ENST00000578830	S100A7L2	Q5SY68	101 aa		5.34	□□□□□ -1.55
NUP85-208	ENST00000578830	KRTAP5-3	Q6L8H2	238 aa		5.34	□□□□□ -1.55
NUP85-208	ENST00000578830	MRPL55	Q7Z7F7	128 aa	Known RBP	5.34	□□□□□ -1.55
NUP85-208	ENST00000578830	PRO1854	Q9UHT4	67 aa		5.34	□□□□□ -1.55
NUP85-208	ENST00000578830		A0A0U1RQV1	116 aa		5.33	□□□□□ -1.56
NUP85-208	ENST00000578830	RPL37AP8	A6NKH3	93 aa		5.33	□□□□□ -1.56
NUP85-208	ENST00000578830	IGLV6-57	P01721	117 aa		5.33	□□□□□ -1.56
NUP85-208	ENST00000578830		Q1RN00	199 aa		5.33	□□□□□ -1.56
NUP85-208	ENST00000578830	LINC00167	Q96N53	147 aa		5.33	□□□□□ -1.56
NUP85-208	ENST00000578830	NAA38	Q9BRA0	125 aa	Known RBP	5.33	□□□□□ -1.56
NUP85-208	ENST00000578830	KRTAP11-1	Q8IUC1	163 aa		5.32	□□□□□ -1.56
NUP85-208	ENST00000578830	TRAV23DV6	A0A075B6W5	121 aa		5.31	□□□□□ -1.56
NUP85-208	ENST00000578830	UBE2B	P63146	152 aa		5.31	□□□□□ -1.56
NUP85-208	ENST00000578830	PRR26	Q8N8Z3	221 aa		5.31	□□□□□ -1.56
NUP85-208	ENST00000578830	SMIM11B	Q8TCY0	68 aa		5.31	□□□□□ -1.56
NUP85-208	ENST00000578830	IGLV1-50	A0A075B6I6	118 aa		5.3	□□□□□ -1.56
NUP85-208	ENST00000578830		B5MCH6	92 aa		5.3	□□□□□ -1.56
NUP85-208	ENST00000578830	PRY	O14603	147 aa		5.3	□□□□□ -1.56
NUP85-208	ENST00000578830	TRIAP1	O43715	76 aa		5.3	□□□□□ -1.56
NUP85-208	ENST00000578830	MT-ATP8	P03928	68 aa		5.3	□□□□□ -1.56
NUP85-208	ENST00000578830	C1orf137	Q5JT78	98 aa		5.3	□□□□□ -1.56
NUP85-208	ENST00000578830	DIRC1	Q969H9	104 aa		5.3	□□□□□ -1.56
NUP85-208	ENST00000578830	SS18L2	Q9UHA2	77 aa		5.3	□□□□□ -1.56
NUP85-208	ENST00000578830	TRBV7-7	A0A0K0K1E9	115 aa		5.29	□□□□□ -1.56
NUP85-208	ENST00000578830		H3BT86	120 aa		5.29	□□□□□ -1.56
NUP85-208	ENST00000578830		J3KT08	172 aa		5.29	□□□□□ -1.56
NUP85-208	ENST00000578830		H0Y9J4	135 aa		5.28	□□□□□ -1.56
NUP85-208	ENST00000578830	ZNF73	O43830	326 aa	Predicted RBP	5.28	□□□□□ -1.56
NUP85-208	ENST00000578830	IGLV7-43	P04211	117 aa		5.28	□□□□□ -1.56
NUP85-208	ENST00000578830	RPL28	P46779	137 aa	Known RBP	5.28	□□□□□ -1.56
NUP85-208	ENST00000578830	PSMB2	P49721	201 aa		5.28	□□□□□ -1.56
NUP85-208	ENST00000578830	ATXN8	Q156A1	80 aa		5.28	□□□□□ -1.56
NUP85-208	ENST00000578830	C6orf99	Q4VX62	202 aa		5.28	□□□□□ -1.56
NUP85-208	ENST00000578830	SMIM20	Q8N5G0	67 aa		5.28	□□□□□ -1.56
NUP85-208	ENST00000578830	KCNQ1DN	Q9H478	68 aa		5.28	□□□□□ -1.56
NUP85-208	ENST00000578830	UQCRQ	O14949	82 aa		5.27	□□□□□ -1.57
NUP85-208	ENST00000578830	COX6C	P09669	75 aa		5.27	□□□□□ -1.57
NUP85-208	ENST00000578830	PRR4	Q16378	134 aa		5.27	□□□□□ -1.57
NUP85-208	ENST00000578830	SPRR1A	P35321	89 aa		5.26	□□□□□ -1.57
NUP85-208	ENST00000578830	ANKRD29	Q8N6D5	301 aa		5.26	□□□□□ -1.57
NUP85-208	ENST00000578830	CLEC2B	Q92478	149 aa		5.26	□□□□□ -1.57
NUP85-208	ENST00000578830	ETDC	A0A1B0GVM5	59 aa		5.25	□□□□□ -1.57
NUP85-208	ENST00000578830	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	5.25	□□□□□ -1.57
NUP85-208	ENST00000578830	SLC25A20	O43772	301 aa		5.25	□□□□□ -1.57
NUP85-208	ENST00000578830	ELOF1	P60002	83 aa	Known RBP	5.25	□□□□□ -1.57
NUP85-208	ENST00000578830	KRTAP15-1	Q3LI76	137 aa		5.25	□□□□□ -1.57
NUP85-208	ENST00000578830	KRTAP1-4	P0C5Y4	121 aa		5.24	□□□□□ -1.57
NUP85-208	ENST00000578830	COX7B	P24311	80 aa		5.24	□□□□□ -1.57
NUP85-208	ENST00000578830	PRLH	P81277	87 aa		5.24	□□□□□ -1.57
NUP85-208	ENST00000578830	FAM19A1	Q7Z5A9	133 aa		5.24	□□□□□ -1.57
NUP85-208	ENST00000578830	FAM218A	Q96MZ4	157 aa		5.24	□□□□□ -1.57
NUP85-208	ENST00000578830	BCE1	O60756	84 aa		5.23	□□□□□ -1.57
NUP85-208	ENST00000578830	TCL1B	O95988	128 aa		5.23	□□□□□ -1.57
NUP85-208	ENST00000578830		Q6ZRX8	168 aa		5.23	□□□□□ -1.57
NUP85-208	ENST00000578830	TRBV7-6	A0A0J9YX20	115 aa		5.22	□□□□□ -1.57
NUP85-208	ENST00000578830	LINC00643	Q86TS7	51 aa		5.22	□□□□□ -1.57
NUP85-208	ENST00000578830	C3orf22	Q8N5N4	141 aa		5.22	□□□□□ -1.57
NUP85-208	ENST00000578830		Q9BRP9	147 aa		5.22	□□□□□ -1.57
NUP85-208	ENST00000578830	MUC17	Q685J3	4493 aa		5.22	□□□□□ -1.57
NUP85-208	ENST00000578830		H0YGX0	51 aa		5.21	□□□□□ -1.58
NUP85-208	ENST00000578830	ATOX1	O00244	68 aa		5.21	□□□□□ -1.58
NUP85-208	ENST00000578830	CRYGA	P11844	174 aa		5.21	□□□□□ -1.58
NUP85-208	ENST00000578830	UBE2A	P49459	152 aa		5.21	□□□□□ -1.58
NUP85-208	ENST00000578830	TMEM258	P61165	79 aa		5.21	□□□□□ -1.58
NUP85-208	ENST00000578830	LINC00575	Q6W349	94 aa		5.21	□□□□□ -1.58
NUP85-208	ENST00000578830	KRTAP13-1	Q8IUC0	172 aa		5.21	□□□□□ -1.58
NUP85-208	ENST00000578830	LST1	O00453	97 aa		5.2	□□□□□ -1.58
NUP85-208	ENST00000578830	SMCR5	Q8TEV8	140 aa		5.2	□□□□□ -1.58
NUP85-208	ENST00000578830	HIGD2A	Q9BW72	106 aa		5.2	□□□□□ -1.58
NUP85-208	ENST00000578830	ERC2-IT1	O76042	136 aa		5.19	□□□□□ -1.58
NUP85-208	ENST00000578830	hADV29S1	A0JD25	119 aa		5.18	□□□□□ -1.58
NUP85-208	ENST00000578830		C9JAW5	83 aa		5.18	□□□□□ -1.58
NUP85-208	ENST00000578830	CCDC179	H3BU77	68 aa		5.18	□□□□□ -1.58
NUP85-208	ENST00000578830	C9orf153	Q5TBE3	101 aa		5.18	□□□□□ -1.58
NUP85-208	ENST00000578830	TRAC	P01848	142 aa		5.17	□□□□□ -1.58
NUP85-208	ENST00000578830	COX7C	P15954	63 aa		5.17	□□□□□ -1.58
NUP85-208	ENST00000578830		Q6ZQY7	126 aa		5.17	□□□□□ -1.58
NUP85-208	ENST00000578830	DHRS4-AS1	Q9P1J3	65 aa		5.17	□□□□□ -1.58
NUP85-208	ENST00000578830	ZNF861P	O60384	105 aa		5.16	□□□□□ -1.58
NUP85-208	ENST00000578830	DNAL4	O96015	105 aa		5.16	□□□□□ -1.58
NUP85-208	ENST00000578830	ST20-AS1	Q8NBB2	130 aa		5.16	□□□□□ -1.58
NUP85-208	ENST00000578830	GAGE2A	Q6NT46	116 aa		5.15	□□□□□ -1.59
NUP85-208	ENST00000578830	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	5.14	□□□□□ -1.59
NUP85-208	ENST00000578830		A0A087X002	238 aa		5.13	□□□□□ -1.59
NUP85-208	ENST00000578830	LINC01547	P58512	204 aa	Predicted RBP	5.13	□□□□□ -1.59
NUP85-208	ENST00000578830	ATP5EP2	Q5VTU8	51 aa		5.13	□□□□□ -1.59
NUP85-208	ENST00000578830	ORMDL1	Q9P0S3	153 aa		5.13	□□□□□ -1.59
NUP85-208	ENST00000578830	HIST1H4A	P62805	103 aa	Known RBP	5.12	□□□□□ -1.59
NUP85-208	ENST00000578830	DEFB105A	Q8NG35	78 aa		5.12	□□□□□ -1.59
NUP85-208	ENST00000578830	TYMSOS	Q8TAI1	123 aa		5.12	□□□□□ -1.59
NUP85-208	ENST00000578830	SPRR4	Q96PI1	79 aa		5.12	□□□□□ -1.59
NUP85-208	ENST00000578830	FSIP2	Q5CZC0	6907 aa		5.11	□□□□□ -1.59
NUP85-208	ENST00000578830	IGLV5-48	A0A075B6I7	105 aa		5.11	□□□□□ -1.59

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