RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 DNAH10OSP0CZ25 163 aa11.63□□□□□ -0.55
ATPAF1-214ENST00000576409 TRAV22A0A0B4J277 110 aa11.63□□□□□ -0.55
ATPAF1-214ENST00000576409 LIMD2Q9BT23 127 aa11.6□□□□□ -0.55
ATPAF1-214ENST00000576409 OXTP01178 125 aa11.59□□□□□ -0.55
ATPAF1-214ENST00000576409 C16orf90A8MZG2 172 aa11.59□□□□□ -0.55
ATPAF1-214ENST00000576409 IGLV5-52A0A0A0MRZ9 124 aa11.59□□□□□ -0.55
ATPAF1-214ENST00000576409 A0A1B0GW54 56 aa11.57□□□□□ -0.56
ATPAF1-214ENST00000576409 MDFIQ99750 246 aa11.57□□□□□ -0.56
ATPAF1-214ENST00000576409 IGKV2D-30A0A075B6S6 120 aa11.57□□□□□ -0.56
ATPAF1-214ENST00000576409 IGKV2-30P06310 120 aa11.57□□□□□ -0.56
ATPAF1-214ENST00000576409 ANAPC11Q9NYG5 84 aa11.55□□□□□ -0.56
ATPAF1-214ENST00000576409 OCR1Q9BZK8 76 aa11.54□□□□□ -0.56
ATPAF1-214ENST00000576409 KMT2BQ9UMN6 2715 aaPredicted RBP11.53□□□□□ -0.56
ATPAF1-214ENST00000576409 Q5XG85 94 aa11.53□□□□□ -0.56
ATPAF1-214ENST00000576409 A8MWP4 228 aa11.5□□□□□ -0.57
ATPAF1-214ENST00000576409 NUPR2A6NF83 97 aa11.5□□□□□ -0.57
ATPAF1-214ENST00000576409 IGLV8-61A0A075B6I0 122 aa11.5□□□□□ -0.57
ATPAF1-214ENST00000576409 FAM229BQ4G0N7 80 aa11.49□□□□□ -0.57
ATPAF1-214ENST00000576409 PRR15Q8IV56 129 aa11.49□□□□□ -0.57
ATPAF1-214ENST00000576409 COA5Q86WW8 74 aa11.48□□□□□ -0.57
ATPAF1-214ENST00000576409 FP248Q71RG6 208 aaPredicted RBP11.48□□□□□ -0.57
ATPAF1-214ENST00000576409 IGLV5-48A0A075B6I7 105 aa11.48□□□□□ -0.57
ATPAF1-214ENST00000576409 SPACA4Q8TDM5 124 aa11.47□□□□□ -0.57
ATPAF1-214ENST00000576409 DSCR10P59022 87 aa11.46□□□□□ -0.57
ATPAF1-214ENST00000576409 DMBT1Q9UGM3 2413 aaPredicted RBP11.46□□□□□ -0.58
ATPAF1-214ENST00000576409 TP53AIP1Q9HCN2 124 aa11.44□□□□□ -0.58
ATPAF1-214ENST00000576409 WIPF1O43516 503 aa11.43□□□□□ -0.58
ATPAF1-214ENST00000576409 NBDYA0A0U1RRE5 68 aa11.42□□□□□ -0.58
ATPAF1-214ENST00000576409 C1orf134Q5TEV5 83 aa11.42□□□□□ -0.58
ATPAF1-214ENST00000576409 K7EIL1 84 aa11.41□□□□□ -0.58
ATPAF1-214ENST00000576409 A0A1B0GU69 56 aa11.39□□□□□ -0.59
ATPAF1-214ENST00000576409 SPENQ96T58 3664 aaKnown RBP11.39□□□□□ -0.59
ATPAF1-214ENST00000576409 H3BPC8 53 aa11.39□□□□□ -0.59
ATPAF1-214ENST00000576409 TLX1NBP0CAT3 122 aa11.37□□□□□ -0.59
ATPAF1-214ENST00000576409 RTL8CO15255 209 aa11.35□□□□□ -0.59
ATPAF1-214ENST00000576409 MRPL34Q9BQ48 92 aaKnown RBP11.34□□□□□ -0.59
ATPAF1-214ENST00000576409 ACYP2P14621 99 aa11.34□□□□□ -0.59
ATPAF1-214ENST00000576409 C8orf17Q9NRJ1 99 aa11.34□□□□□ -0.59
ATPAF1-214ENST00000576409 PLA2G2DQ9UNK4 145 aa11.31□□□□□ -0.6
ATPAF1-214ENST00000576409 K7ERS5 55 aa11.31□□□□□ -0.6
ATPAF1-214ENST00000576409 ATP11AUNQ6ZP68 121 aa11.31□□□□□ -0.6
ATPAF1-214ENST00000576409 C7orf65Q6ZTY9 151 aa11.31□□□□□ -0.6
ATPAF1-214ENST00000576409 C9orf163Q8N9P6 203 aa11.29□□□□□ -0.6
ATPAF1-214ENST00000576409 LOC101927531A0A1B0GV80 90 aa11.28□□□□□ -0.6
ATPAF1-214ENST00000576409 LINC00313P59037 77 aa11.28□□□□□ -0.6
ATPAF1-214ENST00000576409 SPRR4Q96PI1 79 aa11.28□□□□□ -0.6
ATPAF1-214ENST00000576409 PRR26Q8N8Z3 221 aa11.28□□□□□ -0.6
ATPAF1-214ENST00000576409 FLG2Q5D862 2391 aaPredicted RBP11.25□□□□□ -0.61
ATPAF1-214ENST00000576409 A0A1B0GVX0 72 aa11.24□□□□□ -0.61
ATPAF1-214ENST00000576409 PSORS1C2Q9UIG4 136 aa11.2□□□□□ -0.62
ATPAF1-214ENST00000576409 KRTAP26-1Q6PEX3 210 aa11.2□□□□□ -0.62
ATPAF1-214ENST00000576409 CYP4F30PQ9H0H9 118 aa11.2□□□□□ -0.62
ATPAF1-214ENST00000576409 IGLV5-37A0A075B6J1 123 aa11.17□□□□□ -0.62
ATPAF1-214ENST00000576409 PDZD2O15018 2839 aa11.17□□□□□ -0.62
ATPAF1-214ENST00000576409 TENM4Q6N022 2769 aa11.17□□□□□ -0.62
ATPAF1-214ENST00000576409 CNBPP62633 177 aaKnown RBP11.17□□□□□ -0.62
ATPAF1-214ENST00000576409 ZNF861PO60384 105 aa11.16□□□□□ -0.62
ATPAF1-214ENST00000576409 Q1T7F1 81 aa11.15□□□□□ -0.63
ATPAF1-214ENST00000576409 Q96NJ1 140 aa11.15□□□□□ -0.63
ATPAF1-214ENST00000576409 SPRR1AP35321 89 aa11.14□□□□□ -0.63
ATPAF1-214ENST00000576409 CD164Q04900 197 aa11.14□□□□□ -0.63
ATPAF1-214ENST00000576409 TENM3Q9P273 2699 aa11.14□□□□□ -0.63
ATPAF1-214ENST00000576409 A0A087WTM6 91 aa11.13□□□□□ -0.63
ATPAF1-214ENST00000576409 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.12□□□□□ -0.63
ATPAF1-214ENST00000576409 FBN1P35555 2871 aaKnown RBP11.11□□□□□ -0.63
ATPAF1-214ENST00000576409 FAM229AH3BQW9 127 aa11.11□□□□□ -0.63
ATPAF1-214ENST00000576409 KRTAP1-5Q9BYS1 174 aa11.11□□□□□ -0.63
ATPAF1-214ENST00000576409 VWFP04275 2813 aa11.11□□□□□ -0.63
ATPAF1-214ENST00000576409 SPANXA2-OT1Q8N9U9 137 aa11.1□□□□□ -0.63
ATPAF1-214ENST00000576409 Q8N9P0 234 aaPredicted RBP11.09□□□□□ -0.63
ATPAF1-214ENST00000576409 TYMSOSQ8TAI1 123 aa11.09□□□□□ -0.63
ATPAF1-214ENST00000576409 APLNQ9ULZ1 77 aa11.08□□□□□ -0.64
ATPAF1-214ENST00000576409 TENM1Q9UKZ4 2725 aa11.07□□□□□ -0.64
ATPAF1-214ENST00000576409 PLA2G1BP04054 148 aaKnown RBP11.07□□□□□ -0.64
ATPAF1-214ENST00000576409 C8orf87E5RJ46 101 aa11.06□□□□□ -0.64
ATPAF1-214ENST00000576409 KTN1-AS1Q86SY8 53 aa11.05□□□□□ -0.64
ATPAF1-214ENST00000576409 MMP24-AS1A0A0U1RRL7 71 aa11.03□□□□□ -0.64
ATPAF1-214ENST00000576409 UQCR11O14957 56 aa11.03□□□□□ -0.64
ATPAF1-214ENST00000576409 TNP2Q05952 138 aa11.01□□□□□ -0.65
ATPAF1-214ENST00000576409 Q5VV11 94 aa11□□□□□ -0.65
ATPAF1-214ENST00000576409 IGLV7-46A0A075B6I9 117 aa10.99□□□□□ -0.65
ATPAF1-214ENST00000576409 MIR22HGQ0VDD5 57 aa10.99□□□□□ -0.65
ATPAF1-214ENST00000576409 Q8N1X5 172 aa10.99□□□□□ -0.65
ATPAF1-214ENST00000576409 LINC00472Q9H8W2 130 aa10.99□□□□□ -0.65
ATPAF1-214ENST00000576409 CSMD2Q7Z408 3487 aa10.98□□□□□ -0.65
ATPAF1-214ENST00000576409 IGLV7-43P04211 117 aa10.98□□□□□ -0.65
ATPAF1-214ENST00000576409 CDC42SE1Q9NRR8 79 aa10.97□□□□□ -0.65
ATPAF1-214ENST00000576409 KRTAP4-16G5E9R7 235 aaPredicted RBP10.97□□□□□ -0.65
ATPAF1-214ENST00000576409 SSBP3-AS1Q7Z2R9 100 aa10.95□□□□□ -0.66
ATPAF1-214ENST00000576409 C9orf92A6NGG3 77 aa10.95□□□□□ -0.66
ATPAF1-214ENST00000576409 SMR3BP02814 79 aaPredicted RBP10.95□□□□□ -0.66
ATPAF1-214ENST00000576409 RBM12B-AS1Q9P1G2 102 aa10.94□□□□□ -0.66
ATPAF1-214ENST00000576409 PKD1L1Q8TDX9 2849 aa10.93□□□□□ -0.66
ATPAF1-214ENST00000576409 PANO1I0J062 215 aa10.92□□□□□ -0.66
ATPAF1-214ENST00000576409 SPINK7P58062 85 aa10.9□□□□□ -0.66
ATPAF1-214ENST00000576409 PRAC1Q96KF2 57 aa10.9□□□□□ -0.66
ATPAF1-214ENST00000576409 HRES1P13985 223 aa10.9□□□□□ -0.66
ATPAF1-214ENST00000576409 A8MU10 97 aa10.87□□□□□ -0.67
ATPAF1-214ENST00000576409 KRTAP7-1Q8IUC3 87 aa10.87□□□□□ -0.67
ATPAF1-214ENST00000576409 KRTAP11-1Q8IUC1 163 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms