RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 CASC10Q5T4H9 136 aa13.67□□□□□ -0.22
SPSB3-208ENST00000566339 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.66□□□□□ -0.22
SPSB3-208ENST00000566339 H3BPC8 53 aa13.66□□□□□ -0.22
SPSB3-208ENST00000566339 C16orf90A8MZG2 172 aa13.64□□□□□ -0.23
SPSB3-208ENST00000566339 MPLKIPQ8TAP9 179 aa13.63□□□□□ -0.23
SPSB3-208ENST00000566339 MP68P56378 58 aa13.63□□□□□ -0.23
SPSB3-208ENST00000566339 CNBPP62633 177 aaKnown RBP13.63□□□□□ -0.23
SPSB3-208ENST00000566339 SPRR1BP22528 89 aa13.62□□□□□ -0.23
SPSB3-208ENST00000566339 H0Y9J4 135 aa13.61□□□□□ -0.23
SPSB3-208ENST00000566339 C1orf64Q8NEQ6 169 aa13.61□□□□□ -0.23
SPSB3-208ENST00000566339 BRK1Q8WUW1 75 aa13.6□□□□□ -0.23
SPSB3-208ENST00000566339 K7EIL1 84 aa13.58□□□□□ -0.24
SPSB3-208ENST00000566339 KRTAP29-1A8MX34 341 aaPredicted RBP13.57□□□□□ -0.24
SPSB3-208ENST00000566339 PKIGQ9Y2B9 76 aa13.57□□□□□ -0.24
SPSB3-208ENST00000566339 V9GYY9 64 aa13.57□□□□□ -0.24
SPSB3-208ENST00000566339 DNAH1Q9P2D7 4330 aa13.57□□□□□ -0.24
SPSB3-208ENST00000566339 SPANXA2-OT1Q8N9U9 137 aa13.56□□□□□ -0.24
SPSB3-208ENST00000566339 DNAH9Q9NYC9 4486 aa13.56□□□□□ -0.24
SPSB3-208ENST00000566339 COL7A1Q02388 2944 aa13.55□□□□□ -0.24
SPSB3-208ENST00000566339 A0A087WSZ3 146 aa13.54□□□□□ -0.24
SPSB3-208ENST00000566339 C14orf177Q52M58 125 aa13.54□□□□□ -0.24
SPSB3-208ENST00000566339 TRAV22A0A0B4J277 110 aa13.53□□□□□ -0.24
SPSB3-208ENST00000566339 A0A096LNI7 61 aa13.53□□□□□ -0.24
SPSB3-208ENST00000566339 UBE2AP49459 152 aa13.53□□□□□ -0.24
SPSB3-208ENST00000566339 PRR15Q8IV56 129 aa13.5□□□□□ -0.25
SPSB3-208ENST00000566339 PRLHP81277 87 aa13.49□□□□□ -0.25
SPSB3-208ENST00000566339 A8MWP4 228 aa13.48□□□□□ -0.25
SPSB3-208ENST00000566339 A0A1W2PNN7 141 aa13.48□□□□□ -0.25
SPSB3-208ENST00000566339 WFDC13Q8IUB5 93 aa13.47□□□□□ -0.25
SPSB3-208ENST00000566339 CASC2Q6XLA1 102 aa13.46□□□□□ -0.25
SPSB3-208ENST00000566339 LINC00472Q9H8W2 130 aa13.45□□□□□ -0.26
SPSB3-208ENST00000566339 B9D2Q9BPU9 175 aa13.44□□□□□ -0.26
SPSB3-208ENST00000566339 HUWE1Q7Z6Z7 4374 aaKnown RBP13.44□□□□□ -0.26
SPSB3-208ENST00000566339 C1orf195Q5TG92 126 aa13.42□□□□□ -0.26
SPSB3-208ENST00000566339 H0Y9P7 68 aa13.41□□□□□ -0.26
SPSB3-208ENST00000566339 LINC00208Q96KT6 92 aa13.41□□□□□ -0.26
SPSB3-208ENST00000566339 IGKV2-24A0A0C4DH68 120 aa13.4□□□□□ -0.26
SPSB3-208ENST00000566339 A0A0G2JQZ4 141 aa13.38□□□□□ -0.27
SPSB3-208ENST00000566339 DEFB116Q30KQ4 102 aa13.38□□□□□ -0.27
SPSB3-208ENST00000566339 RPL37AP61513 92 aaKnown RBP13.35□□□□□ -0.27
SPSB3-208ENST00000566339 C9orf163Q8N9P6 203 aa13.34□□□□□ -0.27
SPSB3-208ENST00000566339 KRTAP1-5Q9BYS1 174 aa13.32□□□□□ -0.28
SPSB3-208ENST00000566339 PHF5AQ7RTV0 110 aaKnown RBP13.32□□□□□ -0.28
SPSB3-208ENST00000566339 LIMD2Q9BT23 127 aa13.32□□□□□ -0.28
SPSB3-208ENST00000566339 LRCOL1A6NCL2 159 aa13.31□□□□□ -0.28
SPSB3-208ENST00000566339 TP53AIP1Q9HCN2 124 aa13.3□□□□□ -0.28
SPSB3-208ENST00000566339 STAB2Q8WWQ8 2551 aa13.29□□□□□ -0.28
SPSB3-208ENST00000566339 MMP24-AS1A0A0U1RRL7 71 aa13.28□□□□□ -0.28
SPSB3-208ENST00000566339 KRTAP13-1Q8IUC0 172 aa13.28□□□□□ -0.28
SPSB3-208ENST00000566339 KMT2CQ8NEZ4 4911 aaKnown RBP13.28□□□□□ -0.28
SPSB3-208ENST00000566339 PRR4Q16378 134 aa13.27□□□□□ -0.28
SPSB3-208ENST00000566339 ASB16-AS1Q495Z4 193 aa13.27□□□□□ -0.29
SPSB3-208ENST00000566339 MOBPQ13875 183 aa13.26□□□□□ -0.29
SPSB3-208ENST00000566339 KRTAP11-1Q8IUC1 163 aa13.26□□□□□ -0.29
SPSB3-208ENST00000566339 UBE2DNLQ8IWF7 75 aa13.25□□□□□ -0.29
SPSB3-208ENST00000566339 IGLV7-46A0A075B6I9 117 aa13.25□□□□□ -0.29
SPSB3-208ENST00000566339 APLNQ9ULZ1 77 aa13.25□□□□□ -0.29
SPSB3-208ENST00000566339 DNAH7Q8WXX0 4024 aa13.24□□□□□ -0.29
SPSB3-208ENST00000566339 PSPHP1O15172 72 aa13.23□□□□□ -0.29
SPSB3-208ENST00000566339 WWC2-AS2Q96NR7 200 aa13.23□□□□□ -0.29
SPSB3-208ENST00000566339 Q8N9P0 234 aaPredicted RBP13.22□□□□□ -0.29
SPSB3-208ENST00000566339 CHTF8P0CG12 524 aa13.21□□□□□ -0.29
SPSB3-208ENST00000566339 DYNC2H1Q8NCM8 4307 aaKnown RBP13.21□□□□□ -0.3
SPSB3-208ENST00000566339 A8MUN3 132 aa13.19□□□□□ -0.3
SPSB3-208ENST00000566339 Q5VV11 94 aa13.19□□□□□ -0.3
SPSB3-208ENST00000566339 LINC00483Q53H64 154 aa13.18□□□□□ -0.3
SPSB3-208ENST00000566339 Q6ZR54 194 aa13.17□□□□□ -0.3
SPSB3-208ENST00000566339 ZNF706Q9Y5V0 76 aaPredicted RBP13.16□□□□□ -0.3
SPSB3-208ENST00000566339 Q96NJ1 140 aa13.15□□□□□ -0.3
SPSB3-208ENST00000566339 CSMD3Q7Z407 3707 aa13.14□□□□□ -0.31
SPSB3-208ENST00000566339 RYR3Q15413 4870 aa13.14□□□□□ -0.31
SPSB3-208ENST00000566339 LOC101927531A0A1B0GV80 90 aa13.13□□□□□ -0.31
SPSB3-208ENST00000566339 C8orf17Q9NRJ1 99 aa13.12□□□□□ -0.31
SPSB3-208ENST00000566339 STARD9Q9P2P6 4700 aa13.11□□□□□ -0.31
SPSB3-208ENST00000566339 PMAIP1Q13794 54 aa13.11□□□□□ -0.31
SPSB3-208ENST00000566339 COA5Q86WW8 74 aa13.11□□□□□ -0.31
SPSB3-208ENST00000566339 Q75L30 129 aa13.09□□□□□ -0.31
SPSB3-208ENST00000566339 NBDYA0A0U1RRE5 68 aa13.09□□□□□ -0.31
SPSB3-208ENST00000566339 DNAH10Q8IVF4 4471 aa13.08□□□□□ -0.32
SPSB3-208ENST00000566339 SPACA4Q8TDM5 124 aa13.07□□□□□ -0.32
SPSB3-208ENST00000566339 A0A1B0GVX0 72 aa13.06□□□□□ -0.32
SPSB3-208ENST00000566339 Q6ZRN7 208 aaPredicted RBP13.06□□□□□ -0.32
SPSB3-208ENST00000566339 CHKB-CPT1BH3BT56 60 aa13.04□□□□□ -0.32
SPSB3-208ENST00000566339 PRR15LQ9BU68 103 aa13.04□□□□□ -0.32
SPSB3-208ENST00000566339 CDK2AP2O75956 126 aa13.02□□□□□ -0.33
SPSB3-208ENST00000566339 TENM2Q9NT68 2774 aa13.01□□□□□ -0.33
SPSB3-208ENST00000566339 LYSTQ99698 3801 aa13.01□□□□□ -0.33
SPSB3-208ENST00000566339 MRPL34Q9BQ48 92 aaKnown RBP13.01□□□□□ -0.33
SPSB3-208ENST00000566339 LINC01558Q9Y6Z2 57 aa13□□□□□ -0.33
SPSB3-208ENST00000566339 IGLV9-49A0A0B4J1Y8 123 aa12.99□□□□□ -0.33
SPSB3-208ENST00000566339 NUPR2A6NF83 97 aa12.99□□□□□ -0.33
SPSB3-208ENST00000566339 CD164Q04900 197 aa12.99□□□□□ -0.33
SPSB3-208ENST00000566339 SACSQ9NZJ4 4579 aa12.99□□□□□ -0.33
SPSB3-208ENST00000566339 PANO1I0J062 215 aa12.98□□□□□ -0.33
SPSB3-208ENST00000566339 PLAC8Q9NZF1 115 aa12.97□□□□□ -0.33
SPSB3-208ENST00000566339 PLECQ15149 4684 aaKnown RBP12.95□□□□□ -0.34
SPSB3-208ENST00000566339 ATP11AUNQ6ZP68 121 aa12.95□□□□□ -0.34
SPSB3-208ENST00000566339 RYR2Q92736 4967 aa12.94□□□□□ -0.34
SPSB3-208ENST00000566339 SEC61GP60059 68 aa12.93□□□□□ -0.34
SPSB3-208ENST00000566339 PCOTHQ58A44 107 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms