RNA–Protein interactions for RNA: ENST00000562046.1

CNOT1-203, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5

Gene CNOT1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-203ENST00000562046 DEFB130AP0DP74 79 aa0.9□□□□□ -2.27
CNOT1-203ENST00000562046 ASH1LQ9NR48 2969 aaKnown RBP0.9□□□□□ -2.27
CNOT1-203ENST00000562046 AHNAKQ09666 5890 aaKnown RBP0.89□□□□□ -2.27
CNOT1-203ENST00000562046 KLK9Q2XQG4 91 aa0.88□□□□□ -2.27
CNOT1-203ENST00000562046 PKDREJQ9NTG1 2253 aa0.88□□□□□ -2.27
CNOT1-203ENST00000562046 KRTAP5-10Q6L8G5 202 aa0.87□□□□□ -2.27
CNOT1-203ENST00000562046 MACF1Q9UPN3 7388 aaKnown RBP0.87□□□□□ -2.27
CNOT1-203ENST00000562046 CACNA1HO95180 2353 aa0.86□□□□□ -2.27
CNOT1-203ENST00000562046 ZNF462Q96JM2 2506 aa0.86□□□□□ -2.27
CNOT1-203ENST00000562046 WNK2Q9Y3S1 2297 aa0.86□□□□□ -2.27
CNOT1-203ENST00000562046 KNL1Q8NG31 2342 aa0.86□□□□□ -2.27
CNOT1-203ENST00000562046 WT1-ASQ06250 92 aa0.85□□□□□ -2.27
CNOT1-203ENST00000562046 WFDC10BQ8IUB3 73 aa0.85□□□□□ -2.27
CNOT1-203ENST00000562046 SPTBN2O15020 2390 aa0.84□□□□□ -2.27
CNOT1-203ENST00000562046 IGLV5-48A0A075B6I7 105 aa0.84□□□□□ -2.27
CNOT1-203ENST00000562046 IGF2RP11717 2491 aa0.84□□□□□ -2.28
CNOT1-203ENST00000562046 PCNX1Q96RV3 2341 aa0.84□□□□□ -2.28
CNOT1-203ENST00000562046 ZNF469Q96JG9 3925 aaPredicted RBP0.83□□□□□ -2.28
CNOT1-203ENST00000562046 PDE4DIPQ5VU43 2346 aa0.83□□□□□ -2.28
CNOT1-203ENST00000562046 KAAG1Q9UBP8 84 aa0.83□□□□□ -2.28
CNOT1-203ENST00000562046 SPTBN1Q01082 2364 aaKnown RBP0.83□□□□□ -2.28
CNOT1-203ENST00000562046 MUC16Q8WXI7 14507 aa0.83□□□□□ -2.28
CNOT1-203ENST00000562046 REV3LO60673 3130 aa0.82□□□□□ -2.28
CNOT1-203ENST00000562046 MUC5BQ9HC84 5762 aaPredicted RBP0.82□□□□□ -2.28
CNOT1-203ENST00000562046 MEGF8Q7Z7M0 2845 aa0.81□□□□□ -2.28
CNOT1-203ENST00000562046 S4R3F8 94 aa0.81□□□□□ -2.28
CNOT1-203ENST00000562046 CSPG4Q6UVK1 2322 aa0.8□□□□□ -2.28
CNOT1-203ENST00000562046 MMP24-AS1A0A0U1RRL7 71 aa0.8□□□□□ -2.28
CNOT1-203ENST00000562046 H3BUA1 57 aa0.8□□□□□ -2.28
CNOT1-203ENST00000562046 POLR2KP53803 58 aaKnown RBP0.8□□□□□ -2.28
CNOT1-203ENST00000562046 TTC28Q96AY4 2481 aa0.8□□□□□ -2.28
CNOT1-203ENST00000562046 TPRP12270 2363 aaKnown RBP0.79□□□□□ -2.28
CNOT1-203ENST00000562046 DEFB131AP59861 70 aa0.79□□□□□ -2.28
CNOT1-203ENST00000562046 RPL39P62891 51 aaKnown RBP0.79□□□□□ -2.28
CNOT1-203ENST00000562046 GVINP1Q7Z2Y8 2422 aa0.78□□□□□ -2.28
CNOT1-203ENST00000562046 PRLHP81277 87 aa0.78□□□□□ -2.28
CNOT1-203ENST00000562046 DEFB106AQ8N104 65 aa0.78□□□□□ -2.28
CNOT1-203ENST00000562046 ARHGAP5-AS1Q96IT6 56 aa0.78□□□□□ -2.28
CNOT1-203ENST00000562046 F8P00451 2351 aa0.77□□□□□ -2.29
CNOT1-203ENST00000562046 TENM3Q9P273 2699 aa0.77□□□□□ -2.29
CNOT1-203ENST00000562046 ZNF292O60281 2723 aa0.76□□□□□ -2.29
CNOT1-203ENST00000562046 ABCA12Q86UK0 2595 aa0.76□□□□□ -2.29
CNOT1-203ENST00000562046 DEFB109BQ30KR1 87 aa0.76□□□□□ -2.29
CNOT1-203ENST00000562046 RPL39LQ96EH5 51 aaKnown RBP0.76□□□□□ -2.29
CNOT1-203ENST00000562046 DSPP15924 2871 aaKnown RBP0.76□□□□□ -2.29
CNOT1-203ENST00000562046 ABCA2Q9BZC7 2435 aa0.75□□□□□ -2.29
CNOT1-203ENST00000562046 KRTAP19-3Q7Z4W3 81 aa0.75□□□□□ -2.29
CNOT1-203ENST00000562046 POLQO75417 2590 aa0.75□□□□□ -2.29
CNOT1-203ENST00000562046 CELSR2Q9HCU4 2923 aa0.73□□□□□ -2.29
CNOT1-203ENST00000562046 AHNAK2Q8IVF2 5795 aa0.73□□□□□ -2.29
CNOT1-203ENST00000562046 TTTY10Q9BZA0 68 aa0.73□□□□□ -2.29
CNOT1-203ENST00000562046 CELSR1Q9NYQ6 3014 aa0.72□□□□□ -2.29
CNOT1-203ENST00000562046 CLPSL2Q6UWE3 100 aa0.72□□□□□ -2.29
CNOT1-203ENST00000562046 LEAP2Q969E1 77 aa0.72□□□□□ -2.29
CNOT1-203ENST00000562046 PRRC2CQ9Y520 2896 aaKnown RBP0.71□□□□□ -2.3
CNOT1-203ENST00000562046 LINC01590Q5TEZ4 76 aa0.71□□□□□ -2.3
CNOT1-203ENST00000562046 NOP10Q9NPE3 64 aaKnown RBP0.71□□□□□ -2.3
CNOT1-203ENST00000562046 A0A0C4DFX4 3053 aa0.71□□□□□ -2.3
CNOT1-203ENST00000562046 TRANK1O15050 2925 aa0.71□□□□□ -2.3
CNOT1-203ENST00000562046 CHD9Q3L8U1 2897 aa0.71□□□□□ -2.3
CNOT1-203ENST00000562046 AKAP6Q13023 2319 aa0.7□□□□□ -2.3
CNOT1-203ENST00000562046 SPINK1P00995 79 aa0.69□□□□□ -2.3
CNOT1-203ENST00000562046 SMR3AQ99954 134 aa0.69□□□□□ -2.3
CNOT1-203ENST00000562046 NCOR1O75376 2440 aa0.69□□□□□ -2.3
CNOT1-203ENST00000562046 VWFP04275 2813 aa0.69□□□□□ -2.3
CNOT1-203ENST00000562046 CSMD3Q7Z407 3707 aa0.68□□□□□ -2.3
CNOT1-203ENST00000562046 EP300Q09472 2414 aaPredicted RBP0.68□□□□□ -2.3
CNOT1-203ENST00000562046 A8MTW9 85 aa0.68□□□□□ -2.3
CNOT1-203ENST00000562046 M0QY20 66 aa0.68□□□□□ -2.3
CNOT1-203ENST00000562046 CEP290O15078 2479 aa0.67□□□□□ -2.3
CNOT1-203ENST00000562046 DEFB135Q30KP9 77 aa0.67□□□□□ -2.3
CNOT1-203ENST00000562046 H3BSH0 61 aa0.66□□□□□ -2.3
CNOT1-203ENST00000562046 TENM4Q6N022 2769 aa0.66□□□□□ -2.3
CNOT1-203ENST00000562046 H0YGG7 62 aa0.65□□□□□ -2.31
CNOT1-203ENST00000562046 M0R2T5 61 aa0.65□□□□□ -2.31
CNOT1-203ENST00000562046 KRTAP2-3P0C7H8 128 aa0.65□□□□□ -2.31
CNOT1-203ENST00000562046 PRCDQ00LT1 54 aa0.65□□□□□ -2.31
CNOT1-203ENST00000562046 SPINK6Q6UWN8 80 aa0.65□□□□□ -2.31
CNOT1-203ENST00000562046 KRTAP2-4Q9BYR9 128 aa0.65□□□□□ -2.31
CNOT1-203ENST00000562046 KRTAP2-1Q9BYU5 128 aa0.65□□□□□ -2.31
CNOT1-203ENST00000562046 PKD1L2Q7Z442 2459 aa0.65□□□□□ -2.31
CNOT1-203ENST00000562046 BSNQ9UPA5 3926 aa0.64□□□□□ -2.31
CNOT1-203ENST00000562046 FRAS1Q86XX4 4008 aa0.64□□□□□ -2.31
CNOT1-203ENST00000562046 SPTA1P02549 2419 aa0.64□□□□□ -2.31
CNOT1-203ENST00000562046 TOMM7Q9P0U1 55 aa0.64□□□□□ -2.31
CNOT1-203ENST00000562046 ATRQ13535 2644 aa0.64□□□□□ -2.31
CNOT1-203ENST00000562046 CHD6Q8TD26 2715 aa0.63□□□□□ -2.31
CNOT1-203ENST00000562046 BDP1A6H8Y1 2624 aa0.63□□□□□ -2.31
CNOT1-203ENST00000562046 UNC79Q9P2D8 2635 aa0.63□□□□□ -2.31
CNOT1-203ENST00000562046 WNK1Q9H4A3 2382 aa0.63□□□□□ -2.31
CNOT1-203ENST00000562046 DSTQ03001 7570 aaKnown RBP0.63□□□□□ -2.31
CNOT1-203ENST00000562046 ANK2Q01484 3957 aa0.62□□□□□ -2.31
CNOT1-203ENST00000562046 M0QZ58 72 aa0.62□□□□□ -2.31
CNOT1-203ENST00000562046 TNXBP22105 4242 aa0.62□□□□□ -2.31
CNOT1-203ENST00000562046 AKAP13Q12802 2813 aa0.61□□□□□ -2.31
CNOT1-203ENST00000562046 TNRC18O15417 2968 aaPredicted RBP0.61□□□□□ -2.31
CNOT1-203ENST00000562046 NBASA2RRP1 2371 aa0.61□□□□□ -2.31
CNOT1-203ENST00000562046 PRKDCP78527 4128 aaKnown RBP0.61□□□□□ -2.31
CNOT1-203ENST00000562046 PRM1P04553 51 aa0.61□□□□□ -2.31
CNOT1-203ENST00000562046 DEFB104AQ8WTQ1 72 aa0.61□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms